Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 0.0e+00 1606.3 891 100.0
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 3.2e-29 134.8 942 27.0
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 2.6e-26 125.2 381 31.8
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 5.4e-24 117.5 956 24.8
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 1.0e-22 113.2 224 39.7
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 2.2e-22 112.1 298 31.5
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 8.5e-22 110.2 251 34.3
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 5.5e-21 107.5 927 24.5
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 4.7e-20 104.4 252 34.9
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 1.0e-19 103.2 255 34.9
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 1.0e-19 103.2 250 32.4
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 1.4e-19 102.8 326 30.4
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 1.4e-19 102.8 653 24.5
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 6.8e-19 100.5 254 33.5
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 1.2e-18 99.8 253 32.4
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 4.4e-18 97.8 253 31.6
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 5.7e-18 97.4 263 32.7
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 2.2e-17 95.5 401 26.9
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 6.3e-17 94.0 238 35.3
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 1.1e-16 93.2 216 35.6
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 1.1e-16 93.2 209 34.9
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.1e-16 93.2 261 31.8
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 1.8e-16 92.4 371 30.7
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 1.8e-16 92.4 264 32.6
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 2.4e-16 92.0 260 32.3
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 4.1e-16 91.3 118 45.8
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 5.4e-16 90.9 674 24.5
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 7.0e-16 90.5 314 29.3
SEGI_20190 Sequoiadendron giganteum HOM05D007315 ORTHO05D008940 1.2e-15 89.7 678 26.3
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 5.9e-15 87.4 249 32.5
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 7.7e-15 87.0 297 30.3
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 1.3e-14 86.3 925 23.5
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 1.7e-14 85.9 281 32.4
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 5.0e-14 84.3 332 28.6
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 6.6e-14 84.0 259 32.0
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 1.9e-13 82.4 929 23.5
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 3.3e-13 81.6 199 32.2
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 4.3e-13 81.3 251 30.7
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 4.3e-13 81.3 251 30.7
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 5.6e-13 80.9 251 29.5
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 7.3e-13 80.5 149 41.6
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 7.3e-13 80.5 265 32.8
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 1.2e-12 79.7 221 33.0
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.1e-12 79.0 332 29.8
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 6.1e-12 77.4 250 30.0
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.0e-11 76.6 122 40.2
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.4e-11 76.3 308 27.9
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 1.4e-11 76.3 247 29.1
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.8e-11 75.9 377 28.6
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 2.3e-11 75.5 240 28.8
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 2.3e-11 75.5 319 28.2
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.3e-11 75.5 105 43.8
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 3.0e-11 75.1 210 33.3
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 3.0e-11 75.1 110 43.6
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 3.0e-11 75.1 167 36.5
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 4.0e-11 74.7 376 29.3
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 4.0e-11 74.7 175 34.3
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 6.8e-11 73.9 179 31.3
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 8.9e-11 73.6 163 35.0
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 8.9e-11 73.6 163 35.0
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 8.9e-11 73.6 252 28.2
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 8.9e-11 73.6 380 27.9
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 1.2e-10 73.2 193 33.2
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.5e-10 72.8 383 27.4
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 2.0e-10 72.4 103 41.7
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 2.6e-10 72.0 175 36.0
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 2.6e-10 72.0 152 34.9
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 2.6e-10 72.0 380 27.9
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 7.5e-10 70.5 159 35.8
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 7.5e-10 70.5 227 33.5
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 9.8e-10 70.1 175 36.0
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 1.3e-09 69.7 131 42.0
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 1.7e-09 69.3 167 35.3
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 1.7e-09 69.3 229 28.4
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 1.7e-09 69.3 331 27.8
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 3.7e-09 68.2 99 42.4
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 4.9e-09 67.8 168 35.1
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 6.4e-09 67.4 355 28.5
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 6.4e-09 67.4 167 34.7
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 2.4e-08 65.5 260 30.4
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 3.2e-08 65.1 99 40.4
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 7.0e-08 63.9 292 28.4
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 7.0e-08 63.9 398 27.4
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 7.0e-08 63.9 303 29.0
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 9.2e-08 63.5 358 26.3
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 1.2e-07 63.2 154 36.4
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 1.2e-07 63.2 123 33.3
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 1.6e-07 62.8 393 27.0
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 1.6e-07 62.8 103 44.7
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 2.0e-07 62.4 416 25.5
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 3.5e-07 61.6 374 26.5
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 1.0e-06 60.1 361 26.9
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 1.0e-06 60.1 289 25.3
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 1.3e-06 59.7 330 26.4
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 1.7e-06 59.3 155 31.0
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 2.3e-06 58.9 329 27.7
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 2.3e-06 58.9 106 41.5


User provided reference genes

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