Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 1.1e-164 583.2 294 100.0
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 1.1e-95 354.0 299 64.9
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 1.5e-95 353.6 305 61.6
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 9.5e-95 350.9 298 63.4
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 8.9e-93 344.4 289 64.0
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 2.0e-92 343.2 302 61.9
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 4.4e-92 342.0 285 62.1
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.7e-91 340.1 292 61.0
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 2.2e-91 339.7 292 61.3
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 2.2e-91 339.7 292 61.0
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 7.0e-90 334.7 302 59.9
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.6e-89 333.6 295 61.0
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 2.0e-89 333.2 293 60.8
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 3.5e-89 332.4 278 61.9
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 3.5e-89 332.4 295 60.0
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 4.6e-89 332.0 296 60.8
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 1.3e-88 330.5 304 61.8
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 6.6e-88 328.2 269 64.7
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 8.6e-88 327.8 302 59.9
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 1.5e-87 327.0 267 65.5
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 1.5e-87 327.0 292 59.6
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 2.5e-87 326.2 299 58.5
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 5.6e-87 325.1 304 60.2
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 5.6e-87 325.1 294 61.2
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 7.3e-87 324.7 289 61.9
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 9.5e-87 324.3 285 60.4
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.6e-86 323.6 295 60.7
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 2.1e-86 323.2 294 59.2
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 6.2e-86 321.6 300 60.3
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 8.1e-86 321.2 294 60.5
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 1.1e-85 320.9 290 63.4
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 1.1e-85 320.9 285 59.6
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 1.4e-85 320.5 300 60.3
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 1.8e-85 320.1 297 58.2
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 2.3e-85 319.7 295 60.0
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 2.3e-85 319.7 302 58.3
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 3.1e-85 319.3 296 58.4
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 5.2e-85 318.5 297 58.9
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 6.8e-85 318.2 303 56.1
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 6.8e-85 318.2 296 59.8
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 8.9e-85 317.8 295 59.3
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 1.2e-84 317.4 299 59.9
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 1.2e-84 317.4 291 58.8
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 1.5e-84 317.0 342 52.6
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 1.5e-84 317.0 303 59.4
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 1.5e-84 317.0 299 57.9
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 1.5e-84 317.0 283 61.5
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 2.0e-84 316.6 297 59.9
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 5.8e-84 315.1 258 62.4
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 7.5e-84 314.7 290 60.3
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 1.3e-83 313.9 269 60.6
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.3e-83 313.9 305 56.4
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 2.2e-83 313.2 308 55.5
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 2.2e-83 313.2 296 58.4
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 2.9e-83 312.8 291 57.7
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 2.9e-83 312.8 299 58.9
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 3.7e-83 312.4 298 59.1
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 4.9e-83 312.0 283 59.7
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 6.4e-83 311.6 290 59.7
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.9e-82 310.1 303 55.8
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 4.1e-82 308.9 303 56.1
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 1.6e-81 307.0 285 57.5
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 1.6e-81 307.0 271 59.8
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 1.6e-81 307.0 310 56.1
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 2.1e-81 306.6 290 58.3
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 2.1e-81 306.6 273 59.7
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 4.6e-81 305.4 301 56.5
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 1.0e-80 304.3 276 59.8
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.7e-80 303.5 276 59.4
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 2.3e-80 303.1 282 56.7
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.3e-80 303.1 296 55.4
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 3.0e-80 302.8 277 59.2
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 3.9e-80 302.4 289 58.5
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 6.6e-80 301.6 284 58.1
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.1e-79 300.8 284 56.0
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 1.9e-79 300.1 331 52.3
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 2.5e-79 299.7 285 55.8
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 3.3e-79 299.3 285 55.8
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 4.3e-79 298.9 269 58.4
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 7.3e-79 298.1 290 56.2
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 2.1e-78 296.6 296 56.8
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 3.6e-78 295.8 308 56.2
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.2e-76 290.8 298 55.0
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 1.7e-75 287.0 269 57.2
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 3.8e-75 285.8 290 54.5
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 3.8e-75 285.8 302 54.0
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 8.4e-75 284.6 291 57.0
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.4e-74 283.9 277 56.7
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 2.4e-74 283.1 311 52.7
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 4.1e-74 282.3 317 53.6
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.1e-73 280.0 308 53.9
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 6.0e-73 278.5 236 60.6
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 2.3e-72 276.6 300 50.7
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 5.6e-71 271.9 242 60.7
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 1.6e-70 270.4 286 51.7
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.8e-68 261.9 316 50.6
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 7.6e-68 261.5 294 52.0
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 9.0e-61 238.0 292 48.6
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 5.8e-60 235.3 196 62.8
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 1.4e-58 230.7 284 46.1
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.5e-55 219.9 182 62.1
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 4.0e-53 212.6 299 45.5
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 3.0e-48 196.4 180 60.0
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 4.3e-47 192.6 197 55.8
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 6.2e-46 188.7 276 40.2
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 2.4e-45 186.8 267 37.8
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 2.4e-45 186.8 294 36.7
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 7.6e-44 181.8 199 49.2
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 4.2e-42 176.0 141 61.7
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 1.0e-40 171.4 210 48.1
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 5.1e-40 169.1 158 58.2
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 3.7e-38 162.9 125 67.2
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 8.2e-38 161.8 180 54.4
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 3.3e-31 139.8 108 67.6
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.1e-29 133.3 149 56.4
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 4.1e-29 132.9 145 52.4
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 4.1e-29 132.9 157 53.5
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 5.3e-29 132.5 229 40.2
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.5e-28 131.0 162 50.0
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 2.0e-28 130.6 105 67.6
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.1e-26 124.8 151 53.0
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 8.8e-24 115.2 95 62.1
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 8.2e-22 108.6 248 35.5
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.4e-21 107.8 88 63.6
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 2.6e-20 103.6 112 51.8
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.2e-17 94.7 80 65.0
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 1.0e-16 91.7 233 32.6
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 3.8e-11 73.2 104 43.3
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 5.0e-11 72.8 105 45.7
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 4.2e-10 69.7 109 45.0
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 9.4e-10 68.6 108 44.4
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 1.4e-08 64.7 213 26.3
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 1.5e-07 61.2 82 50.0


User provided reference genes

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