Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 8.2e-73 276.9 139 100.0
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 5.9e-47 191.0 110 87.3
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 3.0e-46 188.7 110 84.5
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 5.0e-46 188.0 110 84.5
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 5.0e-46 188.0 110 87.3
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 1.1e-45 186.8 110 87.3
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 1.5e-45 186.4 112 86.6
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 1.9e-45 186.0 110 84.5
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 4.3e-45 184.9 110 83.6
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 4.3e-45 184.9 110 83.6
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 4.3e-45 184.9 110 82.7
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 4.3e-45 184.9 110 82.7
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 7.3e-45 184.1 110 83.6
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 7.3e-45 184.1 110 83.6
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 7.3e-45 184.1 110 82.7
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 7.3e-45 184.1 110 81.8
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 7.3e-45 184.1 102 88.2
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 7.3e-45 184.1 110 85.5
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 7.3e-45 184.1 110 82.7
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 7.3e-45 184.1 110 82.7
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 7.3e-45 184.1 110 82.7
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 9.5e-45 183.7 110 82.7
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 9.5e-45 183.7 105 84.8
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 1.2e-44 183.3 110 82.7
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 1.2e-44 183.3 110 83.6
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.6e-44 183.0 110 83.6
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 1.6e-44 183.0 110 81.8
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 1.6e-44 183.0 110 82.7
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 1.6e-44 183.0 111 83.8
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 1.6e-44 183.0 110 84.5
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 2.1e-44 182.6 109 81.7
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 2.1e-44 182.6 109 81.7
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 4.7e-44 181.4 110 81.8
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 4.7e-44 181.4 110 81.8
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 6.2e-44 181.0 110 82.7
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 6.2e-44 181.0 110 81.8
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 1.4e-43 179.9 110 80.9
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 1.4e-43 179.9 110 82.7
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 1.4e-43 179.9 107 85.0
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 1.8e-43 179.5 109 82.6
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 1.8e-43 179.5 107 86.0
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 4.0e-43 178.3 107 83.2
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 5.2e-43 177.9 112 81.2
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 5.2e-43 177.9 112 81.2
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 6.8e-43 177.6 109 82.6
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 6.8e-43 177.6 106 84.0
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 6.8e-43 177.6 107 83.2
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 6.8e-43 177.6 105 82.9
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 6.8e-43 177.6 106 84.0
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 8.9e-43 177.2 110 80.9
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 8.9e-43 177.2 110 80.9
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 8.9e-43 177.2 110 81.8
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 1.2e-42 176.8 110 79.1
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 1.5e-42 176.4 110 80.0
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 2.0e-42 176.0 102 85.3
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 2.0e-42 176.0 110 80.9
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 2.0e-42 176.0 110 80.9
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 2.0e-42 176.0 107 82.2
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 2.6e-42 175.6 102 83.3
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 2.6e-42 175.6 105 83.8
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 2.6e-42 175.6 102 83.3
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 3.4e-42 175.3 106 82.1
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 5.8e-42 174.5 106 82.1
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 9.8e-42 173.7 102 84.3
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 9.8e-42 173.7 105 81.0
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 9.8e-42 173.7 105 81.0
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 9.8e-42 173.7 117 77.8
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 1.3e-41 173.3 110 79.1
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 1.7e-41 172.9 106 81.1
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 2.9e-41 172.2 106 81.1
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 2.9e-41 172.2 117 76.1
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 3.7e-41 171.8 106 81.1
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 4.9e-41 171.4 102 83.3
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 4.9e-41 171.4 110 74.5
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.9e-41 171.4 101 81.2
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.9e-41 171.4 101 81.2
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 4.9e-41 171.4 110 80.9
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 6.4e-41 171.0 110 77.3
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 6.4e-41 171.0 101 82.2
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 8.3e-41 170.6 111 79.3
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.4e-40 169.9 110 77.3
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 1.4e-40 169.9 110 77.3
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 1.4e-40 169.9 102 80.4
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 1.9e-40 169.5 111 79.3
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.9e-40 169.5 106 77.4
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.4e-40 169.1 106 79.2
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 7.0e-40 167.5 106 77.4
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 7.0e-40 167.5 102 80.4
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 9.2e-40 167.2 110 75.5
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 9.2e-40 167.2 102 81.4
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 9.2e-40 167.2 102 81.4
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 1.2e-39 166.8 148 63.5
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.6e-39 166.4 106 77.4
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 1.6e-39 166.4 110 75.5
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.6e-39 166.4 105 78.1
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 2.0e-39 166.0 107 76.6
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 2.7e-39 165.6 110 75.5
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 2.7e-39 165.6 112 76.8
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 3.5e-39 165.2 110 75.5
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 4.6e-39 164.9 102 77.5
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 4.6e-39 164.9 110 74.5
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 6.0e-39 164.5 105 79.0
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 7.8e-39 164.1 107 75.7
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 1.3e-38 163.3 106 75.5
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 5.0e-38 161.4 106 74.5
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 8.6e-38 160.6 112 72.3
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-37 160.2 108 73.1
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 1.1e-37 160.2 108 73.1
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 1.1e-37 160.2 108 73.1
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 1.1e-37 160.2 108 73.1
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 2.5e-37 159.1 112 72.3
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 3.3e-37 158.7 119 68.1
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 3.3e-37 158.7 112 72.3
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 7.3e-37 157.5 135 65.2
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.2e-36 156.8 104 73.1
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 1.2e-36 156.8 103 73.8
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 1.2e-36 156.8 103 73.8
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 1.1e-35 153.7 113 70.8
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 3.4e-34 148.7 118 65.3
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 2.2e-33 146.0 188 48.4
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 4.6e-31 138.3 163 50.3
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 5.1e-30 134.8 80 83.8
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 5.6e-29 131.3 124 61.3
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 7.3e-29 131.0 78 84.6
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 1.6e-28 129.8 81 81.5
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 2.1e-28 129.4 81 80.2
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.4e-27 126.7 190 42.6
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 9.9e-26 120.6 71 78.9
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 1.3e-25 120.2 81 74.1
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 4.9e-25 118.2 73 78.1
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.9e-24 116.3 77 74.0
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.2e-23 113.6 224 36.2
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 2.7e-23 112.5 65 84.6
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 2.7e-23 112.5 65 84.6
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.5e-21 106.7 69 76.8
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 1.6e-20 103.2 75 68.0
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 2.0e-18 96.3 76 67.1
Lj6C255T9 Lonicera japonica HOM05D004131 ORTHO05D004778 9.9e-18 94.0 73 69.9
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 1.3e-17 93.6 80 63.8
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 1.7e-17 93.2 110 49.1
ClCG08G000030 Citrullus lanatus HOM05D004131 ORTHO05D004778 2.2e-17 92.8 112 53.6
Oeu050314.3 Olea europaea HOM05D004131 ORTHO05D004778 2.9e-17 92.4 137 47.4
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 4.6e-15 85.1 62 69.4
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 7.8e-15 84.3 154 40.3
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 1.3e-12 77.0 77 54.5
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 1.3e-12 77.0 77 54.5
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 1.3e-12 77.0 77 54.5
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 1.4e-11 73.6 92 48.9
Thecc.04G162100 Theobroma cacao HOM05D004131 ORTHO05D004778 3.1e-11 72.4 50 82.0
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 3.4e-10 68.9 34 88.2
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 5.8e-10 68.2 47 76.6
Lju470A13T22 Lonicera japonica HOM05D004131 ORTHO05D004778 1.3e-09 67.0 47 74.5
QL10p059329 Quercus lobata HOM05D004131 ORTHO05D004778 2.9e-09 65.9 44 77.3
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 6.0e-07 58.2 45 68.9
MCO01G557 Micromonas commoda HOM05D004131 ORTHO05D004778 7.9e-07 57.8 88 38.6
Zm00001eb027620 Zea mays HOM05D002020 ORTHO05D002046 2.3e-06 56.2 39 71.8
BcaB02g07200 Brassica carinata HOM05D004131 ORTHO05D004778 3.9e-06 55.5 48 66.7
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 3.9e-06 55.5 39 74.4


User provided reference genes

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