Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 5.1e-45 184.1 98 100.0
ATR0071G034 Amborella trichopoda HOM05D007100 ORTHO05D008958 1.4e-26 122.9 83 81.9
ATR0829G181 Amborella trichopoda HOM05D007100 ORTHO05D008958 4.0e-21 104.8 75 78.7
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 2.0e-12 75.9 104 52.9
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 2.4e-10 68.9 113 45.1
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 2.4e-10 68.9 113 45.1
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 7.0e-10 67.4 102 47.1
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 7.0e-10 67.4 101 47.5
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 1.6e-09 66.2 100 47.0
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 4.5e-09 64.7 106 42.5
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 4.5e-09 64.7 105 44.8
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 5.9e-09 64.3 101 46.5
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 7.7e-09 63.9 100 45.0
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 1.3e-08 63.2 99 45.5
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 1.3e-08 63.2 104 44.2
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 1.3e-08 63.2 104 44.2
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 1.3e-08 63.2 114 43.0
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 1.7e-08 62.8 106 46.2
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.7e-08 62.8 100 45.0
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.7e-08 62.8 99 46.5
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 1.7e-08 62.8 92 47.8
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 2.2e-08 62.4 100 46.0
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 2.9e-08 62.0 101 45.5
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 2.9e-08 62.0 111 43.2
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 2.9e-08 62.0 101 44.6
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.8e-08 61.6 101 44.6
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 5.0e-08 61.2 101 45.5
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 5.0e-08 61.2 106 45.3
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 5.0e-08 61.2 106 45.3
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 6.5e-08 60.8 98 41.8
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 6.5e-08 60.8 104 43.3
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 8.5e-08 60.5 99 42.4
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 1.1e-07 60.1 98 46.9
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 1.1e-07 60.1 96 49.0
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 1.1e-07 60.1 110 44.5
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 1.1e-07 60.1 101 42.6
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 1.5e-07 59.7 94 47.9
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.5e-07 59.7 97 45.4
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 1.5e-07 59.7 101 44.6
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 1.5e-07 59.7 106 45.3
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 1.5e-07 59.7 105 42.9
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 1.5e-07 59.7 99 41.4
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 1.9e-07 59.3 104 46.2
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 1.9e-07 59.3 101 43.6
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 1.9e-07 59.3 101 43.6
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.9e-07 59.3 101 43.6
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.9e-07 59.3 101 43.6
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 3.2e-07 58.5 99 40.4
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 3.2e-07 58.5 99 40.4
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 4.2e-07 58.2 89 49.4
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 4.2e-07 58.2 104 46.2
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 4.2e-07 58.2 89 46.1
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 5.5e-07 57.8 97 45.4
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 5.5e-07 57.8 88 50.0
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 5.5e-07 57.8 99 44.4
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 5.5e-07 57.8 99 44.4
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 7.2e-07 57.4 95 42.1
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 9.4e-07 57.0 97 44.3
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 9.4e-07 57.0 97 43.3
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 1.2e-06 56.6 97 44.3
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 1.2e-06 56.6 89 44.9
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 2.1e-06 55.8 89 43.8
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 2.7e-06 55.5 90 47.8
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 2.7e-06 55.5 90 46.7
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 3.6e-06 55.1 89 43.8
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 3.6e-06 55.1 91 46.2
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 3.6e-06 55.1 99 45.5
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 4.7e-06 54.7 96 45.8
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 6.1e-06 54.3 103 43.7
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 6.1e-06 54.3 103 43.7
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 6.1e-06 54.3 89 43.8
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 6.1e-06 54.3 95 44.2
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 8.0e-06 53.9 91 46.2
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 8.0e-06 53.9 99 39.4
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 8.0e-06 53.9 91 44.0


User provided reference genes

Program Settings