Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 5.3e-284 980.3 490 100.0
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 2.5e-140 503.1 365 68.5
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 5.5e-140 501.9 375 67.2
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 5.7e-137 491.9 365 68.8
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 2.2e-136 490.0 370 67.0
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 4.9e-136 488.8 368 67.1
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 2.7e-134 483.0 371 66.6
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 3.5e-134 482.6 354 68.9
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 3.5e-134 482.6 369 67.2
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 4.6e-134 482.3 374 65.5
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 8.6e-133 478.0 353 68.8
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.1e-132 477.6 349 69.6
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 1.5e-132 477.2 373 66.2
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 9.5e-132 474.6 368 66.0
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 1.2e-131 474.2 349 68.8
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 2.8e-131 473.0 374 66.3
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 3.6e-131 472.6 382 64.4
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 1.0e-130 471.1 370 65.9
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 2.3e-130 469.9 367 64.9
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 5.2e-130 468.8 369 66.7
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 5.2e-130 468.8 356 68.3
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 5.2e-130 468.8 371 66.8
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 6.8e-130 468.4 351 67.0
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.2e-129 467.6 351 67.5
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 1.2e-129 467.6 351 68.9
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 1.2e-129 467.6 356 66.3
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 2.6e-129 466.5 351 67.5
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 3.4e-129 466.1 372 63.7
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 5.8e-129 465.3 371 65.0
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.3e-128 464.2 314 73.6
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 2.9e-128 463.0 352 67.6
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 4.9e-128 462.2 351 68.7
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 4.9e-128 462.2 374 65.2
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 6.4e-128 461.8 356 64.9
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.9e-127 460.3 374 65.0
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 2.4e-127 459.9 374 65.0
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 2.4e-127 459.9 351 67.8
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 4.1e-127 459.1 354 66.4
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 5.4e-127 458.8 380 63.4
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 5.4e-127 458.8 354 65.8
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 7.0e-127 458.4 373 64.6
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 1.6e-126 457.2 306 73.9
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 2.7e-126 456.4 372 63.2
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.7e-126 456.4 372 64.2
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 4.6e-126 455.7 380 63.2
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 4.6e-126 455.7 370 63.2
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 6.0e-126 455.3 355 65.9
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 1.0e-125 454.5 362 65.7
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 1.7e-125 453.8 349 66.5
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 6.6e-125 451.8 370 63.8
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 1.1e-124 451.1 349 66.2
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.1e-124 451.1 348 66.4
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 2.5e-124 449.9 368 63.3
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 4.3e-124 449.1 352 62.2
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 5.6e-124 448.7 353 66.0
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 7.3e-124 448.4 304 71.4
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 1.2e-123 447.6 368 64.1
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 1.6e-123 447.2 407 60.2
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 4.7e-123 445.7 370 63.8
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 6.2e-123 445.3 346 66.5
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 6.2e-123 445.3 405 58.8
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 6.2e-123 445.3 306 71.6
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 1.8e-122 443.7 372 62.4
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 2.3e-122 443.4 348 65.5
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 4.0e-122 442.6 360 64.2
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 8.9e-122 441.4 349 65.6
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 8.9e-122 441.4 307 70.7
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 1.2e-121 441.0 383 60.3
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 1.5e-121 440.7 358 64.2
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 3.4e-121 439.5 366 62.6
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 3.4e-121 439.5 356 64.0
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 5.8e-121 438.7 370 62.2
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 5.8e-121 438.7 370 62.7
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 5.8e-121 438.7 282 76.6
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 1.3e-120 437.6 378 60.8
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 1.7e-120 437.2 303 71.9
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 2.2e-120 436.8 379 60.2
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 2.9e-120 436.4 307 69.7
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 2.9e-120 436.4 307 69.4
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 4.9e-120 435.6 309 68.6
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 1.9e-119 433.7 376 60.1
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 3.2e-119 433.0 386 58.8
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 4.1e-119 432.6 326 65.3
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 4.6e-118 429.1 309 68.9
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 6.0e-118 428.7 357 63.9
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 1.0e-117 427.9 368 61.1
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 1.7e-117 427.2 313 68.4
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 6.6e-117 425.2 328 65.2
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 2.5e-116 423.3 313 67.7
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 2.5e-116 423.3 313 67.7
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 2.5e-116 423.3 313 67.7
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 9.5e-116 421.4 416 55.3
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 1.6e-115 420.6 322 65.2
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 2.8e-115 419.9 313 67.7
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 2.8e-115 419.9 285 72.3
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 1.4e-114 417.5 375 60.3
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 3.1e-114 416.4 283 73.1
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 6.8e-114 415.2 327 63.9
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 2.4e-111 406.8 370 60.8
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 2.1e-110 403.7 345 61.7
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 1.7e-109 400.6 251 77.7
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 1.1e-108 397.9 310 64.5
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 6.8e-106 388.7 258 71.3
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 6.4e-104 382.1 255 72.5
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 5.4e-103 379.0 312 63.5
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 1.5e-100 370.9 302 61.3
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 6.2e-99 365.5 329 57.4
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 7.1e-95 352.1 258 68.6
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 1.3e-91 341.3 367 52.3
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.2e-89 334.7 286 63.3
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 7.6e-89 332.0 270 60.7
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 1.2e-86 324.7 322 54.7
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 2.1e-86 323.9 377 50.1
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 3.9e-85 319.7 242 65.7
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 2.4e-82 310.5 373 49.3
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 4.5e-81 306.2 196 74.0
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 1.3e-80 304.7 370 47.6
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 8.4e-80 302.0 278 56.5
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.4e-73 280.0 266 56.8
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.2e-70 271.6 176 75.6
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 1.5e-68 264.6 199 67.3
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.4e-66 257.3 380 43.2
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 4.1e-66 256.5 346 40.5
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.9e-63 247.7 195 69.2
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 3.6e-62 243.4 183 64.5
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 1.1e-60 238.4 324 43.2
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 2.0e-60 237.7 198 64.1
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 8.2e-59 232.3 182 63.2
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 5.9e-57 226.1 165 70.3
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 7.9e-54 215.7 341 39.9
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.3e-53 214.2 171 64.9
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 4.4e-52 209.9 209 55.0
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 4.4e-52 209.9 185 56.8
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 2.4e-50 204.1 130 73.8
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 5.3e-50 203.0 336 35.4
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 2.9e-48 197.2 353 36.0
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 9.7e-44 182.2 115 71.3
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.3e-43 181.8 129 74.4
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 3.7e-43 180.3 146 61.0
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.0e-41 174.5 376 33.2
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 9.5e-31 139.0 117 59.8
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 4.4e-28 130.2 163 46.0
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 3.7e-27 127.1 305 33.1
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 2.0e-25 121.3 95 69.5
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 4.0e-21 107.1 87 65.5
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 7.5e-20 102.8 70 64.3
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 7.5e-20 102.8 86 59.3
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.4e-10 72.0 49 71.4
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 5.4e-10 70.1 66 60.6


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