Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 1.8e-90 335.9 169 100.0
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 1.4e-37 160.2 170 52.4
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 4.4e-36 155.2 169 50.3
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 9.8e-36 154.1 168 49.4
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 2.2e-35 152.9 174 50.0
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 2.8e-35 152.5 173 50.3
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 3.5e-33 145.6 159 49.1
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 1.3e-32 143.7 170 47.6
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 2.9e-32 142.5 176 46.0
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 3.9e-32 142.1 166 46.4
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 5.0e-32 141.7 167 46.7
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 1.1e-31 140.6 174 47.7
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.5e-31 140.2 174 45.4
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.5e-31 139.4 171 48.0
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 3.3e-31 139.0 171 48.0
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 5.6e-31 138.3 171 46.2
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 1.2e-30 137.1 170 45.3
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 2.1e-30 136.3 171 46.2
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 3.6e-30 135.6 173 46.2
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 3.6e-30 135.6 171 46.2
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 4.7e-30 135.2 171 46.8
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 4.7e-30 135.2 172 47.1
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 6.1e-30 134.8 167 47.9
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 6.1e-30 134.8 167 47.9
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 8.0e-30 134.4 183 44.3
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 1.0e-29 134.0 167 47.9
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 1.0e-29 134.0 167 47.9
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 1.0e-29 134.0 167 47.9
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 2.3e-29 132.9 168 46.4
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 3.1e-29 132.5 172 46.5
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 3.1e-29 132.5 174 46.0
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 4.0e-29 132.1 172 48.3
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 4.0e-29 132.1 180 47.2
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 5.2e-29 131.7 176 47.2
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 5.2e-29 131.7 171 44.4
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 5.2e-29 131.7 172 46.5
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 5.2e-29 131.7 178 45.5
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 5.2e-29 131.7 173 47.4
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 6.8e-29 131.3 175 47.4
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 6.8e-29 131.3 170 45.9
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 8.9e-29 131.0 167 46.7
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 8.9e-29 131.0 169 46.2
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 8.9e-29 131.0 169 46.2
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 1.2e-28 130.6 176 43.8
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.5e-28 130.2 170 45.3
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 2.6e-28 129.4 177 41.2
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 3.4e-28 129.0 167 42.5
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 4.4e-28 128.6 167 46.7
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 4.4e-28 128.6 170 44.7
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 5.8e-28 128.3 178 45.5
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 7.5e-28 127.9 170 44.7
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 1.3e-27 127.1 172 44.2
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 3.7e-27 125.6 170 42.4
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 8.3e-27 124.4 170 43.5
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 8.3e-27 124.4 172 40.7
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 1.1e-26 124.0 168 43.5
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 1.1e-26 124.0 156 47.4
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 1.1e-26 124.0 171 45.0
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.4e-26 123.6 139 45.3
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 1.4e-26 123.6 174 46.6
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.4e-26 123.6 137 47.4
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 1.9e-26 123.2 156 47.4
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 1.9e-26 123.2 174 43.7
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 2.4e-26 122.9 170 41.8
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 3.2e-26 122.5 171 44.4
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 4.1e-26 122.1 170 43.5
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 1.6e-25 120.2 168 43.5
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.6e-25 120.2 168 43.5
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 2.7e-25 119.4 169 40.2
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 2.7e-25 119.4 170 44.1
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 3.5e-25 119.0 168 42.9
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 7.8e-25 117.9 164 42.1
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 1.7e-24 116.7 169 44.4
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 5.0e-24 115.2 166 36.7
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 6.6e-24 114.8 172 39.5
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 1.1e-23 114.0 170 40.6
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 1.9e-23 113.2 171 42.1
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 3.3e-23 112.5 167 40.7
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 4.3e-23 112.1 169 40.8
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 5.6e-23 111.7 161 42.9
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 9.5e-23 110.9 172 39.5
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 8.0e-22 107.8 166 38.6
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 1.1e-21 107.5 142 41.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.4e-21 107.1 144 45.8
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 1.8e-21 106.7 167 41.3
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 5.2e-21 105.1 159 42.1
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 3.4e-20 102.4 167 40.1
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 3.4e-20 102.4 163 37.4
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 4.4e-20 102.1 169 39.6
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 1.7e-19 100.1 167 38.9
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 1.1e-18 97.4 166 36.1
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 2.3e-16 89.7 137 35.8
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 8.6e-16 87.8 116 44.8
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 1.5e-15 87.0 147 40.8
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 2.5e-15 86.3 134 36.6
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 1.6e-14 83.6 169 36.1
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 2.1e-14 83.2 133 35.3
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 6.2e-14 81.6 126 41.3
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 1.2e-12 77.4 117 41.9
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 4.4e-12 75.5 134 34.3
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 1.6e-06 57.0 71 47.9


User provided reference genes

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