Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 4.3e-300 1033.9 516 100.0
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 9.6e-151 537.7 530 54.3
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 3.7e-142 509.2 519 53.4
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.2e-140 504.2 524 51.3
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 1.7e-139 500.4 523 51.1
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 9.3e-138 494.6 521 49.7
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 6.0e-137 491.9 524 49.0
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 6.0e-137 491.9 523 49.9
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 7.9e-137 491.5 524 49.0
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.9e-135 486.9 515 52.6
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 2.8e-134 483.0 525 49.9
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 3.7e-134 482.6 529 48.2
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 3.7e-134 482.6 529 48.2
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 2.4e-133 479.9 521 48.8
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 4.1e-133 479.2 513 51.9
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 7.7e-132 474.9 525 47.0
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 7.7e-132 474.9 521 48.2
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 2.5e-130 469.9 514 48.8
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 3.2e-130 469.5 517 48.0
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 2.7e-129 466.5 515 46.6
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 6.1e-129 465.3 523 48.4
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 6.1e-129 465.3 517 47.6
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 5.1e-128 462.2 523 49.1
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 8.8e-128 461.5 518 49.0
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 5.7e-127 458.8 487 55.0
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 2.2e-126 456.8 521 46.6
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 3.7e-126 456.1 521 46.8
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 1.1e-125 454.5 521 44.9
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 1.4e-125 454.1 525 49.0
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.4e-125 453.4 514 46.7
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 3.1e-125 453.0 526 46.4
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 4.1e-125 452.6 502 49.8
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 5.3e-125 452.2 516 46.9
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 6.9e-125 451.8 516 47.3
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 6.9e-125 451.8 525 46.7
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 2.6e-124 449.9 523 48.8
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 4.5e-124 449.1 525 46.7
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.3e-123 447.6 519 47.2
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 1.7e-123 447.2 520 47.9
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 2.9e-123 446.4 531 47.8
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 2.9e-123 446.4 527 46.5
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 2.9e-123 446.4 513 45.2
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 5.0e-123 445.7 516 47.1
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.4e-122 444.1 505 48.1
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.4e-122 444.1 526 46.0
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.2e-122 442.6 519 46.8
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 5.5e-122 442.2 519 46.8
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 9.4e-122 441.4 515 47.0
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 4.7e-121 439.1 498 49.0
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 6.1e-121 438.7 522 44.4
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 1.4e-120 437.6 525 46.5
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 2.3e-120 436.8 516 47.9
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 3.9e-120 436.0 511 46.4
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 5.1e-120 435.6 436 48.9
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 2.0e-119 433.7 520 45.6
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 7.4e-119 431.8 542 45.4
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 2.2e-118 430.3 517 47.6
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 2.8e-118 429.9 500 48.6
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 2.4e-117 426.8 523 46.8
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.2e-116 424.5 503 46.7
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 3.5e-116 422.9 524 47.3
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 4.5e-116 422.5 521 46.4
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 7.7e-116 421.8 501 48.5
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.0e-115 421.4 525 45.1
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.0e-115 421.4 523 46.7
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 1.3e-115 421.0 526 47.3
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 1.7e-115 420.6 520 46.2
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 2.9e-115 419.9 522 45.4
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 5.0e-115 419.1 497 48.1
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 6.5e-115 418.7 517 43.1
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 8.5e-115 418.3 520 46.0
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 1.1e-114 417.9 489 46.0
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 9.4e-114 414.8 518 43.6
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 9.4e-114 414.8 522 43.7
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.1e-113 413.7 521 43.8
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 6.1e-113 412.1 497 46.3
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 8.0e-113 411.8 526 44.9
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 8.0e-113 411.8 511 45.2
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 6.7e-112 408.7 495 45.5
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 1.5e-111 407.5 513 44.6
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.7e-110 404.1 518 41.5
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 4.1e-109 399.4 496 46.2
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 4.5e-108 396.0 514 44.7
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-107 394.4 491 43.2
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 5.0e-107 392.5 528 42.2
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 8.5e-107 391.7 501 44.9
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-106 391.0 490 43.3
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 1.5e-103 380.9 502 44.2
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 2.6e-103 380.2 495 44.2
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 9.7e-103 378.3 502 43.8
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.7e-102 377.5 493 45.4
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 4.1e-101 372.9 504 44.4
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 1.2e-100 371.3 516 41.3
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.1e-98 364.8 515 42.5
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 4.2e-98 362.8 348 50.0
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 5.5e-98 362.5 526 41.4
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 4.7e-97 359.4 341 51.3
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.4e-96 357.8 400 47.8
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 5.7e-95 352.4 404 48.3
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 7.5e-79 298.9 515 35.5
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 2.0e-76 290.8 389 42.7
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 3.0e-75 287.0 278 49.6
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 6.2e-73 279.3 519 34.5
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 1.3e-70 271.6 481 34.3
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.1e-66 258.5 196 61.2
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.9e-66 257.7 348 42.2
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 9.2e-61 238.8 159 64.8
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 7.8e-60 235.7 206 53.9
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 7.8e-60 235.7 206 53.9
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.9e-58 231.1 333 43.2
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 3.8e-54 216.9 526 28.1
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 9.9e-47 192.2 502 30.9
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 2.5e-29 134.4 195 40.0
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.3e-25 122.1 177 40.7
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 1.1e-21 109.0 143 39.9
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 2.5e-21 107.8 116 48.3
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 7.1e-21 106.3 143 39.2
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.0e-19 102.4 171 38.0
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 4.3e-18 97.1 115 44.3
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.8e-17 93.6 115 43.5
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.4e-16 92.0 119 42.0
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 3.0e-11 74.3 115 29.6
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 5.1e-11 73.6 119 42.9
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 6.5e-06 56.6 45 48.9


User provided reference genes

Program Settings