Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.0e-134 483.4 239 100.0
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 1.2e-52 210.7 234 46.6
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 2.1e-52 209.9 232 49.6
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 4.1e-48 195.7 240 44.2
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 1.1e-43 181.0 246 41.9
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 3.1e-43 179.5 234 41.0
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 3.1e-43 179.5 234 41.0
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 5.2e-43 178.7 236 41.9
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 6.9e-43 178.3 234 42.7
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 6.9e-43 178.3 241 41.9
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 3.4e-42 176.0 243 43.2
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 2.9e-41 172.9 248 40.7
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 3.8e-41 172.6 242 41.7
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 4.9e-41 172.2 237 40.9
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.4e-40 170.6 235 40.0
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 2.4e-40 169.9 242 41.3
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 5.4e-40 168.7 237 38.4
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 9.3e-40 167.9 236 40.3
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 9.3e-40 167.9 234 41.0
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 1.6e-39 167.2 235 40.9
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 2.1e-39 166.8 235 38.7
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 2.1e-39 166.8 247 40.1
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 2.1e-39 166.8 240 40.8
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 2.7e-39 166.4 238 38.7
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 3.5e-39 166.0 233 37.8
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 4.6e-39 165.6 234 38.9
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 6.0e-39 165.2 234 38.9
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 7.8e-39 164.9 234 38.9
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.3e-38 164.1 234 40.2
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 2.3e-38 163.3 235 38.7
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 5.1e-38 162.2 235 39.6
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 6.6e-38 161.8 238 38.7
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 6.6e-38 161.8 242 40.9
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 6.6e-38 161.8 234 38.0
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 8.7e-38 161.4 239 40.2
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 1.1e-37 161.0 236 39.4
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 1.5e-37 160.6 235 39.1
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 1.9e-37 160.2 255 39.2
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 2.5e-37 159.8 235 38.7
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 7.3e-37 158.3 237 40.5
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 9.6e-37 157.9 241 39.4
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 9.6e-37 157.9 235 37.9
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 1.6e-36 157.1 241 41.1
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 3.6e-36 156.0 232 38.8
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 4.8e-36 155.6 235 38.3
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 6.2e-36 155.2 236 38.6
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 2.4e-35 153.3 238 39.9
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 4.0e-35 152.5 233 37.3
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 9.0e-35 151.4 240 37.5
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.2e-34 151.0 243 37.4
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.2e-34 151.0 215 40.0
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 1.5e-34 150.6 219 39.7
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 3.4e-34 149.4 243 37.0
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 4.5e-34 149.1 232 37.9
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 4.5e-34 149.1 257 34.2
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 5.8e-34 148.7 235 35.7
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 7.6e-34 148.3 229 39.7
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 7.6e-34 148.3 203 39.4
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.3e-33 147.5 235 35.7
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 1.3e-33 147.5 233 37.8
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 6.4e-33 145.2 239 38.5
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.4e-32 144.1 236 37.3
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.9e-32 143.7 235 36.6
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 3.2e-32 142.9 234 35.9
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 4.2e-32 142.5 233 36.1
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 7.1e-32 141.7 233 35.6
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 7.1e-32 141.7 233 35.6
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 7.1e-32 141.7 233 35.6
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.2e-31 141.0 233 35.6
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 1.2e-31 141.0 232 37.5
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 1.2e-31 141.0 232 34.5
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 2.1e-31 140.2 235 36.6
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.0e-30 137.9 232 33.2
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 1.0e-30 137.9 235 34.9
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.3e-30 137.5 234 35.5
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 2.3e-30 136.7 243 37.0
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 5.1e-30 135.6 238 37.8
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 6.7e-30 135.2 293 32.8
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 1.9e-29 133.7 204 37.7
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 1.8e-27 127.1 258 30.6
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 3.1e-27 126.3 232 34.1
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 9.0e-27 124.8 174 38.5
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 4.5e-26 122.5 237 31.6
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 1.1e-24 117.9 205 34.1
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 9.3e-24 114.8 143 40.6
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 3.5e-23 112.8 232 31.0
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 1.0e-22 111.3 189 38.1
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 2.3e-22 110.2 217 29.5
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 2.3e-22 110.2 304 27.0
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 8.7e-22 108.2 154 42.2
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 1.1e-21 107.8 164 38.4
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.1e-21 107.8 232 29.7
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 1.3e-20 104.4 176 35.8
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 3.7e-20 102.8 232 29.7
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 2.6e-18 96.7 236 31.8
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 6.5e-17 92.0 178 32.6
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.9e-13 80.5 244 27.5
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 1.3e-12 77.8 235 25.5
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 4.2e-08 62.8 142 29.6
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 9.4e-08 61.6 108 38.9
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 5.1e-06 55.8 112 32.1


User provided reference genes

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