Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 0.0e+00 1616.7 1020 100.0
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 1.6e-152 544.7 878 47.3
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 4.7e-141 506.5 877 45.2
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 4.3e-134 483.4 870 39.2
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 1.3e-130 471.9 863 45.5
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 2.9e-130 470.7 852 44.1
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 2.0e-128 464.5 975 41.3
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 1.1e-126 458.8 969 40.9
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 1.0e-124 452.2 917 39.3
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 7.5e-123 446.0 861 42.0
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 9.8e-123 445.7 884 42.6
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.3e-122 445.3 876 43.2
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 8.3e-122 442.6 871 42.8
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.1e-121 442.2 875 43.4
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 2.7e-120 437.6 873 42.7
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 7.8e-120 436.0 873 42.6
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 2.3e-119 434.5 879 40.7
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 3.0e-119 434.1 875 43.4
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 5.0e-119 433.3 874 38.3
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 8.6e-119 432.6 876 42.9
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.1e-118 432.2 874 43.5
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 9.5e-118 429.1 877 41.0
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 2.8e-117 427.6 873 41.8
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 6.2e-117 426.4 862 43.7
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 8.1e-117 426.0 879 42.0
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 1.1e-116 425.6 847 43.3
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 1.4e-116 425.2 869 44.2
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 1.8e-116 424.9 869 41.9
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 4.0e-116 423.7 885 40.6
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 5.2e-116 423.3 899 40.3
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 8.9e-116 422.5 872 36.4
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 3.4e-115 420.6 886 40.7
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 4.9e-114 416.8 898 42.3
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 4.9e-114 416.8 886 40.7
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 6.4e-114 416.4 846 42.7
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 1.1e-113 415.6 872 41.6
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 1.4e-113 415.2 887 37.7
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 2.4e-113 414.5 877 41.2
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 2.4e-113 414.5 886 43.1
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 7.1e-113 412.9 892 41.8
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 9.2e-113 412.5 894 39.5
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 1.2e-112 412.1 871 42.3
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 1.3e-111 408.7 896 42.4
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 2.3e-111 407.9 870 38.3
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 1.5e-110 405.2 850 42.5
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 1.5e-110 405.2 878 36.2
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.9e-110 404.8 897 41.9
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 2.5e-110 404.4 880 40.6
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 4.3e-110 403.7 877 40.6
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 9.5e-110 402.5 847 39.0
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 4.7e-109 400.2 870 43.2
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.1e-108 399.1 902 38.8
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 1.4e-108 398.7 866 37.2
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 6.8e-108 396.4 871 40.2
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 6.8e-108 396.4 889 42.0
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 1.2e-107 395.6 874 40.6
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 1.5e-107 395.2 901 41.2
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 2.6e-107 394.4 877 34.5
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 3.4e-107 394.0 852 39.8
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 7.6e-107 392.9 846 41.0
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 1.3e-106 392.1 874 40.7
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 2.9e-106 391.0 877 35.2
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 3.8e-106 390.6 879 42.4
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 1.9e-105 388.3 871 41.8
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 2.4e-105 387.9 869 41.3
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 7.1e-105 386.3 882 39.7
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 2.7e-104 384.4 870 40.0
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 2.7e-104 384.4 839 42.8
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 3.5e-104 384.0 858 38.2
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 6.0e-104 383.3 873 40.7
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 1.0e-103 382.5 894 43.1
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 5.1e-103 380.2 959 34.7
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 6.6e-103 379.8 878 39.0
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 1.1e-102 379.0 868 39.7
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 1.5e-102 378.6 864 35.3
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 1.6e-101 375.2 870 39.3
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 2.8e-101 374.4 944 41.0
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 3.6e-101 374.0 875 39.2
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 1.8e-100 371.7 727 45.0
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 2.4e-100 371.3 850 38.5
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 4.0e-100 370.5 853 40.1
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 8.9e-100 369.4 837 35.7
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 8.9e-100 369.4 915 37.2
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 2.0e-99 368.2 752 41.8
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 2.6e-99 367.9 880 35.0
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 3.4e-99 367.5 865 37.2
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 4.4e-99 367.1 886 40.5
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 1.7e-98 365.2 877 39.1
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 4.9e-98 363.6 853 38.5
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 4.9e-98 363.6 828 39.1
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 4.9e-98 363.6 866 37.0
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 1.9e-97 361.7 882 38.2
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 3.2e-97 360.9 882 38.2
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 4.2e-97 360.5 869 34.9
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.6e-96 358.6 883 39.2
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 5.8e-91 340.1 852 39.1
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 3.8e-90 337.4 819 37.5
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 1.9e-89 335.1 798 42.1
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 1.2e-88 332.4 845 37.3
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 3.9e-87 327.4 761 38.4
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 5.1e-87 327.0 843 36.9
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 1.9e-86 325.1 843 36.8
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 1.3e-85 322.4 542 41.0
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 1.6e-85 322.0 844 36.3
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 2.8e-85 321.2 844 36.1
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 1.1e-81 309.3 876 33.9
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 3.7e-77 294.3 642 41.4
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 2.4e-76 291.6 883 35.7
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 1.3e-74 285.8 866 33.8
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 1.4e-73 282.3 510 37.6
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 1.9e-49 202.2 475 34.3
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 1.7e-42 179.1 276 40.2
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 4.0e-39 167.9 375 36.3
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 1.5e-38 166.0 886 27.2
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 2.0e-38 165.6 724 31.6
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 5.7e-38 164.1 482 31.1
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 1.7e-37 162.5 528 29.5
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 3.7e-37 161.4 476 31.1
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 5.5e-33 147.5 601 26.8
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 2.6e-30 138.7 331 32.0
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 1.4e-28 132.9 169 43.8
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 9.1e-28 130.2 218 40.4
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 2.5e-25 122.1 112 51.8
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 2.8e-24 118.6 178 44.4
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 5.7e-22 110.9 213 31.5
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 8.6e-18 97.1 172 36.0
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 5.6e-17 94.4 149 38.9
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 2.8e-08 65.5 128 38.3
Zm00001eb367440 Zea mays HOM05D005855 ORTHO05D006406 4.7e-08 64.7 104 38.5
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 1.8e-07 62.8 73 45.2
Ah.06g195240 Amaranthus hybridus HOM05D000941 ORTHO05D000882 3.4e-06 58.5 67 49.3


User provided reference genes

Program Settings