Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 4.1e-130 468.8 383 100.0
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 5.3e-37 159.5 275 42.5
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 8.4e-35 152.1 277 37.5
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 1.4e-34 151.4 278 34.9
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.5e-34 150.6 269 35.7
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 5.5e-34 149.4 277 40.1
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 1.2e-33 148.3 273 40.3
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 6.0e-33 146.0 284 46.1
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 6.0e-33 146.0 284 46.1
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 1.8e-32 144.4 277 44.8
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 6.7e-32 142.5 279 39.4
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 6.7e-32 142.5 273 45.1
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 8.7e-32 142.1 284 45.4
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 2.5e-31 140.6 277 39.7
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 5.7e-31 139.4 277 42.2
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 7.4e-31 139.0 277 39.4
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 9.6e-31 138.7 277 43.7
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 2.1e-30 137.5 275 45.1
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 2.8e-30 137.1 275 38.5
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 2.8e-30 137.1 278 38.1
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 6.3e-30 136.0 266 38.0
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 1.1e-29 135.2 277 38.3
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 1.4e-29 134.8 277 37.9
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 1.4e-29 134.8 274 36.1
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 2.4e-29 134.0 278 32.7
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 2.4e-29 134.0 275 44.4
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 3.1e-29 133.7 275 44.0
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 4.1e-29 133.3 270 41.5
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 5.3e-29 132.9 280 40.4
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 6.9e-29 132.5 267 42.7
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 9.0e-29 132.1 275 36.4
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 9.0e-29 132.1 267 37.1
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 1.5e-28 131.3 275 36.7
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 2.0e-28 131.0 276 44.6
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 3.4e-28 130.2 273 47.6
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 1.0e-27 128.6 276 47.1
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 1.3e-27 128.3 276 37.7
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 1.3e-27 128.3 252 46.8
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 1.7e-27 127.9 277 36.5
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 1.7e-27 127.9 277 35.7
Mapoly0166s0007 Marchantia polymorpha HOM05D005998 ORTHO05D007664 3.8e-27 126.7 271 46.9
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 5.0e-27 126.3 277 40.4
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 1.4e-26 124.8 252 40.5
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 5.5e-26 122.9 277 44.0
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 9.3e-26 122.1 275 36.0
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 2.7e-25 120.6 268 43.3
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 3.6e-25 120.2 300 44.0
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 7.9e-25 119.0 277 35.0
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 1.3e-24 118.2 273 42.9
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 1.3e-24 118.2 276 39.9
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 2.3e-24 117.5 277 34.7
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 2.3e-24 117.5 277 34.7
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 3.9e-24 116.7 267 47.2
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 1.1e-23 115.2 277 42.2
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 1.5e-23 114.8 264 48.5
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 1.9e-23 114.4 275 41.1
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 2.5e-23 114.0 237 37.6
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 5.7e-23 112.8 277 38.3
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 7.4e-23 112.5 295 43.4
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 1.6e-22 111.3 260 43.1
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 2.8e-22 110.5 274 38.3
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 4.8e-22 109.8 275 38.9
Zm00001eb112540 Zea mays HOM05D005998 ORTHO05D007664 1.4e-21 108.2 268 46.6
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 1.5e-20 104.8 273 37.0
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 2.0e-20 104.4 276 39.1
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 4.5e-20 103.2 273 37.0
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 2.9e-19 100.5 257 42.8
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 6.5e-19 99.4 143 38.5
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 1.4e-18 98.2 267 43.8
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 1.9e-18 97.8 277 46.9
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 3.6e-17 93.6 277 46.2
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 7.9e-17 92.4 277 45.8
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 3.0e-16 90.5 287 33.1
Duzib211G0440 Durio zibethinus HOM05D005998 ORTHO05D007664 3.9e-16 90.1 205 44.4
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 1.5e-15 88.2 278 45.3
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 2.6e-15 87.4 277 45.8
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-15 87.0 253 34.4
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 3.3e-15 87.0 277 44.8
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 2.2e-14 84.3 151 47.0
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 4.8e-14 83.2 269 33.1
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 1.1e-13 82.0 268 34.0
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 1.1e-13 82.0 268 34.0
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.1e-13 80.5 273 37.4
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 3.1e-13 80.5 267 33.7
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 4.1e-13 80.1 89 48.3
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 2.6e-12 77.4 89 48.3
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 4.5e-12 76.6 276 30.4
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 3.8e-11 73.6 265 38.1
Zm00001eb182340 Zea mays HOM05D005998 ORTHO05D015715 8.5e-11 72.4 82 48.8
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-10 70.9 251 33.1
Zm00001eb048880 Zea mays HOM05D005998 ORTHO05D015715 2.7e-09 67.4 78 48.7
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 4.7e-09 66.6 81 49.4
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 4.7e-09 66.6 143 28.7
Potri.007G048101 Populus trichocarpa HOM05D001905 ORTHO05D001820 1.8e-08 64.7 132 34.8
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 8.8e-08 62.4 280 25.7
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 2.0e-07 61.2 141 27.7
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.6e-07 60.8 285 27.0
MD10G1146000 Malus domestica HOM05D005998 ORTHO05D007664 2.6e-07 60.8 265 38.5
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-07 60.8 140 28.6
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-07 60.8 140 28.6
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-07 60.8 140 28.6
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-07 60.8 140 28.6
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-07 60.8 140 28.6
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 4.4e-07 60.1 68 47.1
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 4.4e-07 60.1 138 29.0
Aqoxy5G01162 Aquilegia oxysepala HOM05D001905 ORTHO05D001820 6.3e-06 56.2 134 30.6
Lj4g0025766 Lotus japonicus HOM05D001905 ORTHO05D001820 6.3e-06 56.2 104 37.5
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 6.3e-06 56.2 102 30.4


User provided reference genes

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