Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 0.0e+00 1164.1 554 100.0
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 5.1e-283 977.2 546 81.9
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 3.3e-282 974.5 550 80.5
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 2.1e-281 971.8 546 81.1
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 3.7e-281 971.1 546 81.9
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 8.1e-281 969.9 546 81.3
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 2.4e-280 968.4 550 80.5
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 2.4e-280 968.4 546 80.4
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 4.0e-280 967.6 546 80.0
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 5.3e-280 967.2 546 81.0
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.2e-279 966.1 546 80.8
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 7.6e-279 963.4 546 79.9
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 9.9e-279 963.0 544 80.5
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 1.3e-278 962.6 537 81.0
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 2.9e-278 961.4 546 80.2
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 1.1e-277 959.5 546 80.6
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 9.3e-277 956.4 550 78.5
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 1.6e-276 955.7 540 80.2
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 6.0e-276 953.7 546 79.5
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.3e-275 952.6 546 79.7
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 2.3e-275 951.8 545 78.7
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 5.1e-275 950.7 537 79.7
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 1.5e-274 949.1 546 78.4
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 3.3e-274 948.0 546 78.0
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 7.4e-274 946.8 545 79.4
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 3.7e-273 944.5 549 78.7
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 8.2e-273 943.3 545 78.2
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 1.4e-272 942.6 540 79.4
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 2.4e-272 941.8 540 79.8
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 4.0e-272 941.0 546 78.4
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 1.2e-271 939.5 547 77.7
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 1.5e-271 939.1 543 78.5
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 7.6e-271 936.8 546 76.9
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 1.0e-270 936.4 559 75.8
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 1.0e-270 936.4 569 77.0
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 1.7e-270 935.6 546 77.3
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 2.9e-270 934.9 544 77.9
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 3.8e-270 934.5 576 75.5
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 4.9e-270 934.1 537 79.1
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 1.1e-269 932.9 545 77.4
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 1.1e-269 932.9 545 77.6
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 1.1e-269 932.9 545 77.4
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 1.1e-269 932.9 566 75.6
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 4.2e-269 931.0 546 78.0
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 5.5e-269 930.6 591 73.4
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 7.1e-269 930.2 545 77.2
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 1.2e-268 929.5 545 76.9
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.2e-268 929.5 545 76.9
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 2.1e-268 928.7 545 77.2
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 2.1e-268 928.7 545 77.6
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 3.5e-268 927.9 579 74.4
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 3.5e-268 927.9 537 78.2
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 4.6e-268 927.5 591 73.4
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 7.9e-268 926.8 545 76.5
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 7.9e-268 926.8 545 76.5
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 1.8e-267 925.6 545 76.9
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 1.4e-264 916.0 545 76.7
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 6.9e-264 913.7 545 75.4
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 1.2e-263 912.9 545 74.9
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 5.9e-263 910.6 546 76.9
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.7e-262 909.1 541 77.6
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 1.7e-262 909.1 606 70.8
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 6.5e-262 907.1 541 77.3
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 1.4e-261 906.0 547 75.1
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 9.3e-261 903.3 545 75.6
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 2.7e-260 901.7 601 69.9
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 3.6e-260 901.4 599 71.0
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 1.0e-259 899.8 544 76.8
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 8.8e-259 896.7 544 74.4
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 1.1e-256 889.8 560 74.3
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 1.8e-256 889.0 524 77.9
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 2.4e-256 888.6 549 75.2
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 1.4e-253 879.4 514 76.3
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 5.5e-253 877.5 546 73.1
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 4.4e-250 867.8 540 73.1
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 1.3e-249 866.3 552 71.2
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 3.1e-248 861.7 554 73.8
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 1.7e-246 855.9 496 77.8
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 4.2e-245 851.3 545 72.7
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 5.2e-243 844.3 710 59.9
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 5.2e-243 844.3 756 56.6
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 6.3e-241 837.4 547 71.3
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 2.5e-237 825.5 468 80.3
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 7.2e-237 823.9 467 79.4
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 7.7e-231 803.9 546 70.5
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 6.5e-230 800.8 546 70.1
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 8.8e-227 790.4 500 72.0
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 9.8e-226 786.9 549 67.8
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 3.4e-218 761.9 432 79.4
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 3.7e-193 678.7 550 59.1
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 1.5e-189 666.8 429 70.9
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 1.2e-188 663.7 449 70.2
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 1.4e-179 633.6 369 78.0
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 7.1e-176 621.3 586 54.4
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.1e-168 597.4 471 61.1
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.5e-165 587.0 538 55.0
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 1.9e-165 586.6 559 51.9
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 2.2e-161 573.2 555 49.7
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 3.2e-152 542.7 350 70.9
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 9.7e-133 478.0 345 67.5
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 2.5e-120 436.8 430 54.2
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.5e-114 416.4 264 72.3
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 1.3e-97 361.3 201 80.1
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 2.3e-97 360.5 202 77.7
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.1e-80 305.1 178 79.2
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 1.1e-78 298.5 178 77.5
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 1.1e-75 288.5 170 77.6
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 3.2e-75 287.0 172 73.8
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 7.3e-72 275.8 174 73.0
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 4.0e-54 216.9 150 66.0
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.0e-50 203.0 119 77.3
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 1.8e-49 201.4 116 75.0
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-46 192.2 106 83.0
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.4e-35 155.2 127 63.8
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.5e-32 144.4 127 59.8
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 4.3e-32 143.7 82 75.6
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 2.2e-31 141.4 83 79.5
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.8e-28 130.6 82 76.8
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.3e-24 117.5 112 56.2
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.3e-24 117.5 112 56.2
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.1e-17 93.6 78 59.0
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 5.9e-13 80.1 48 81.2
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 6.5e-12 76.6 51 68.6
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.5e-11 73.6 59 61.0
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.8e-07 61.2 54 53.7
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 8.2e-07 59.7 34 76.5
Sp4g25500 Schrenkiella parvula HOM05D000001 ORTHO05D000003 1.4e-06 58.9 77 44.2
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 3.1e-06 57.8 42 59.5
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 5.3e-06 57.0 40 62.5
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 5.3e-06 57.0 40 62.5


User provided reference genes

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