Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G010 Amborella trichopoda HOM05D003975 ORTHO05D009762 3.1e-166 590.1 993 100.0
ATR0743G137 Amborella trichopoda HOM05D003975 ORTHO05D009762 6.1e-154 549.3 993 97.7
MBI04_g11438_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009762 1.8e-28 132.5 812 74.3
TAR375G0346 Trochodendron aralioides HOM05D003975 ORTHO05D009762 1.7e-23 115.9 162 40.7
Gorai.003G114200 Gossypium raimondii HOM05D003975 ORTHO05D009762 6.8e-20 104.0 178 33.1
Dinv28563 Davidia involucrata HOM05D003975 ORTHO05D009762 8.9e-20 103.6 170 35.9
Gohir.D03G107900 Gossypium hirsutum HOM05D003975 ORTHO05D009762 5.8e-19 100.9 178 32.6
Thecc.03G157100 Theobroma cacao HOM05D003975 ORTHO05D009762 3.7e-18 98.2 169 35.5
Haze_13863 Corylus avellana HOM05D003975 ORTHO05D009762 4.9e-18 97.8 149 38.3
Cfa008191 Carpinus fangiana HOM05D003975 ORTHO05D009762 8.3e-18 97.1 149 36.9
Cc00_g07030 Coffea canephora HOM05D003975 ORTHO05D009762 1.1e-17 96.7 152 36.2
TWI39G0436 Tripterygium wilfordii HOM05D003975 ORTHO05D009762 1.9e-17 95.9 160 32.5
Nitab4.5_0002816g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 4.1e-17 94.7 177 35.0
Lj8C41T2 Lonicera japonica HOM05D003975 ORTHO05D009762 1.2e-16 93.2 154 33.1
MSTRG.8816 Avicennia marina HOM05D003975 ORTHO05D009762 1.6e-16 92.8 174 33.9
Migut.F00464 Erythranthe guttata HOM05D003975 ORTHO05D009762 1.6e-16 92.8 168 33.9
Aqoxy6G00092 Aquilegia oxysepala HOM05D003975 ORTHO05D009762 2.7e-16 92.0 164 32.3
CANSAT11G0896 Cannabis sativa HOM05D003975 ORTHO05D009762 3.5e-16 91.7 161 34.2
Duzib205G1466 Durio zibethinus HOM05D003975 ORTHO05D009762 4.6e-16 91.3 168 32.1
Nitab4.5_0002149g0030 Nicotiana tabacum HOM05D003975 ORTHO05D009762 7.8e-16 90.5 154 37.0
Nitab4.5_0009543g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.3e-15 89.7 154 37.0
QL05p001270 Quercus lobata HOM05D003975 ORTHO05D009762 1.3e-15 89.7 149 35.6
Sed0001623 Sechium edule HOM05D003975 ORTHO05D009762 1.3e-15 89.7 151 32.5
COL.COLO4_14135 Corchorus olitorius HOM05D003975 ORTHO05D009762 1.7e-15 89.4 170 34.1
MELO3C006816.2 Cucumis melo HOM05D003975 ORTHO05D009762 1.7e-15 89.4 158 33.5
CAN.G48.19 Capsicum annuum HOM05D003975 ORTHO05D009762 2.3e-15 89.0 152 37.5
QL09p019427 Quercus lobata HOM05D003975 ORTHO05D009762 6.6e-15 87.4 147 34.7
Eucgr.D00222 Eucalyptus grandis HOM05D003975 ORTHO05D009762 4.3e-14 84.7 158 35.4
SGA_v2.0_scaffold2G01188 Striga asiatica HOM05D003975 ORTHO05D009762 4.3e-14 84.7 149 35.6
AT5G62370 Arabidopsis thaliana HOM05D003975 ORTHO05D009762 7.3e-14 84.0 152 31.6
Ciclev10004237m.g Citrus clementina HOM05D003975 ORTHO05D009762 7.3e-14 84.0 159 29.6
Carub.0008s2305 Capsella rubella HOM05D003975 ORTHO05D009762 9.5e-14 83.6 168 32.7
Lsat_1_v5_gn_8_8880 Lactuca sativa HOM05D003975 ORTHO05D009762 9.5e-14 83.6 162 29.0
AL8G39200 Arabidopsis lyrata HOM05D003975 ORTHO05D009762 3.6e-13 81.6 168 29.8
GSVIVG01018516001 Vitis vinifera HOM05D003975 ORTHO05D009762 3.6e-13 81.6 108 41.7
CARHR276150 Cardamine hirsuta HOM05D003975 ORTHO05D009762 4.7e-13 81.3 157 30.6
DCAR_029158 Daucus carota HOM05D003975 ORTHO05D009762 4.7e-13 81.3 178 32.0
Potri.004G200900 Populus trichocarpa HOM05D003975 ORTHO05D009762 6.2e-13 80.9 171 31.6
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 1.8e-12 79.3 140 35.7
Sp2g25540 Schrenkiella parvula HOM05D003975 ORTHO05D009762 1.8e-12 79.3 162 30.2
Solyc03g093150.3 Solanum lycopersicum HOM05D003975 ORTHO05D009762 1.8e-12 79.3 110 41.8
Sopen03g023950 Solanum pennellii HOM05D003975 ORTHO05D009762 1.8e-12 79.3 110 41.8
Thhalv10003595m.g Eutrema salsugineum HOM05D003975 ORTHO05D009762 2.4e-12 79.0 150 30.7
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 2.4e-12 79.0 150 30.7
HanXRQChr05g0142511 Helianthus annuus HOM05D003975 ORTHO05D009762 3.1e-12 78.6 141 31.2
Gohir.A03G058201 Gossypium hirsutum HOM05D003975 ORTHO05D009762 4.0e-12 78.2 104 40.4
Sabra15G0054000 Salix brachista HOM05D003975 ORTHO05D009762 5.2e-12 77.8 171 30.4
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 8.9e-12 77.0 127 33.9
Sabra15G0045800 Salix brachista HOM05D003975 ORTHO05D009762 1.2e-11 76.6 137 33.6
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 1.5e-11 76.3 162 30.2
PGSC0003DMG402014825 Solanum tuberosum HOM05D003975 ORTHO05D009762 1.5e-11 76.3 110 40.9
Rhsim09G0192100 Rhododendron simsii HOM05D000201 ORTHO05D000375 2.0e-11 75.9 150 29.3
Manes.15G055100 Manihot esculenta HOM05D003975 ORTHO05D009762 2.6e-11 75.5 158 30.4
Sabra15G0044600 Salix brachista HOM05D003975 ORTHO05D009762 5.8e-11 74.3 137 32.8
Sabra15G0046400 Salix brachista HOM05D003975 ORTHO05D009762 5.8e-11 74.3 137 32.8
Sabra15G0048500 Salix brachista HOM05D003975 ORTHO05D009762 5.8e-11 74.3 137 32.8
Sabra15G0052100 Salix brachista HOM05D003975 ORTHO05D009762 5.8e-11 74.3 137 32.8
Sabra15G0053100 Salix brachista HOM05D003975 ORTHO05D009762 5.8e-11 74.3 137 32.8
Sabra15G0060200 Salix brachista HOM05D003975 ORTHO05D009762 5.8e-11 74.3 137 32.8
Sabra15G0031500 Salix brachista HOM05D003975 ORTHO05D009762 9.9e-11 73.6 137 33.6
BolC1t02243H Brassica oleracea HOM05D003975 ORTHO05D009762 1.3e-10 73.2 163 28.8
Atru.chr1.696 Acer truncatum HOM05D003975 ORTHO05D009762 2.2e-10 72.4 149 29.5
CiPaw.03G094900 Carya illinoinensis HOM05D003975 ORTHO05D009762 2.9e-10 72.0 97 40.2
CSS0048267 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 4.9e-10 71.2 108 41.7
CSS0004960 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 1.4e-09 69.7 108 40.7
THA.LOC104821407 Tarenaya hassleriana HOM05D003975 ORTHO05D009762 4.2e-09 68.2 154 28.6
HPP92_003270 Vanilla planifolia HOM05D003975 ORTHO05D009762 5.4e-09 67.8 158 29.7
PGR142G2422 Punica granatum HOM05D003975 ORTHO05D009762 1.6e-08 66.2 114 31.6
Atru.chr1.699 Acer truncatum HOM05D003975 ORTHO05D009762 2.1e-08 65.9 108 36.1
Os10g0116000 Oryza sativa ssp. japonica HOM05D003975 ORTHO05D009762 4.6e-08 64.7 85 40.0
A01p18130 Brassica napus HOM05D003975 ORTHO05D009762 1.0e-07 63.5 124 30.6
BraA01t01768Z Brassica rapa HOM05D003975 ORTHO05D009762 1.0e-07 63.5 124 30.6
ECA233G1567 Erigeron canadensis HOM05D003975 ORTHO05D009762 2.3e-07 62.4 122 32.8
BcaNung03570 Brassica carinata HOM05D003975 ORTHO05D009762 5.1e-07 61.2 111 32.4
C01p23090 Brassica napus HOM05D003975 ORTHO05D009762 5.1e-07 61.2 124 29.8
Peaxi162Scf00241g00015 Petunia axillaris HOM05D003975 ORTHO05D009762 5.1e-07 61.2 107 34.6
Nn1g01091 Nelumbo nucifera HOM05D003975 ORTHO05D009762 6.6e-07 60.8 108 34.3
Nitab4.5_0002556g0070 Nicotiana tabacum HOM05D003975 ORTHO05D009762 9.6e-06 57.0 90 34.4


User provided reference genes

Program Settings