Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 1.7e-168 595.9 298 100.0
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 8.4e-91 337.8 307 52.4
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.3e-88 329.7 315 54.6
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 6.7e-88 328.2 299 55.2
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 7.4e-87 324.7 304 53.6
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 4.8e-86 322.0 306 51.6
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 4.8e-86 322.0 306 52.0
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.1e-85 320.9 307 52.4
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 1.4e-85 320.5 294 54.4
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 5.3e-85 318.5 304 52.3
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 6.9e-85 318.2 295 53.6
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 6.9e-85 318.2 301 54.2
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.5e-84 317.0 301 51.8
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.6e-84 316.2 304 51.6
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.6e-84 316.2 293 53.2
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 3.4e-84 315.8 289 54.3
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 1.0e-83 314.3 308 50.6
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.3e-83 313.9 306 53.6
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.7e-83 313.5 300 52.3
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 2.2e-83 313.2 299 53.5
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 5.0e-83 312.0 304 52.6
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 1.1e-82 310.8 295 53.6
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 1.9e-82 310.1 308 51.0
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 3.2e-82 309.3 307 50.5
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 3.2e-82 309.3 306 52.9
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.1e-81 306.6 302 50.0
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 2.1e-81 306.6 306 51.3
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 2.1e-81 306.6 302 50.3
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 3.6e-81 305.8 300 50.0
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 3.6e-81 305.8 300 50.0
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 6.1e-81 305.1 305 50.2
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 7.9e-81 304.7 307 49.8
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.3e-80 303.9 307 50.8
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 2.3e-80 303.1 307 50.5
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.9e-80 302.4 306 51.0
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 5.1e-80 302.0 302 49.3
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 1.1e-79 300.8 307 49.8
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 1.1e-79 300.8 314 47.5
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.9e-79 300.1 306 49.7
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 2.5e-79 299.7 302 49.0
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 4.3e-79 298.9 330 48.5
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 4.3e-79 298.9 305 49.5
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 5.7e-79 298.5 302 48.7
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 7.4e-79 298.1 304 48.0
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 7.4e-79 298.1 364 45.3
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 9.7e-79 297.7 301 49.5
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 1.3e-78 297.4 303 48.5
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 2.2e-78 296.6 309 47.2
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 2.8e-78 296.2 298 50.7
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 4.8e-78 295.4 301 49.8
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 8.2e-78 294.7 298 50.3
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.4e-77 293.9 301 47.2
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 4.1e-77 292.4 298 49.3
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 5.3e-77 292.0 308 47.7
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 6.9e-77 291.6 298 48.0
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 6.9e-77 291.6 306 49.0
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.2e-76 290.8 298 48.7
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 2.6e-76 289.7 307 47.9
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 2.6e-76 289.7 298 49.0
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 3.4e-76 289.3 298 47.7
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 4.5e-76 288.9 289 50.5
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.0e-75 287.7 298 48.7
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 2.2e-75 286.6 303 50.2
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.2e-75 286.6 301 48.8
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 2.9e-75 286.2 308 47.1
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.9e-75 286.2 304 47.7
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 2.9e-75 286.2 307 47.2
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 6.5e-75 285.0 291 49.5
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 6.5e-75 285.0 298 49.3
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.1e-74 284.3 298 47.0
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 3.6e-73 279.3 298 49.3
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 3.6e-73 279.3 313 48.6
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 6.1e-73 278.5 308 44.5
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 6.1e-73 278.5 304 47.4
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 7.9e-73 278.1 313 48.2
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 3.0e-72 276.2 289 47.8
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 5.1e-72 275.4 298 47.3
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 6.7e-72 275.0 298 49.0
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.5e-71 273.9 307 45.0
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.5e-71 273.9 296 47.0
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 2.0e-71 273.5 300 47.0
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 5.7e-71 271.9 292 48.6
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 5.7e-71 271.9 298 47.3
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 9.7e-71 271.2 298 47.3
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 9.7e-71 271.2 298 47.3
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 3.7e-70 269.2 298 46.6
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 3.7e-70 269.2 280 50.0
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 6.9e-69 265.0 311 46.6
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.2e-68 264.2 297 44.1
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.0e-67 261.2 292 46.6
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 1.4e-66 257.3 308 45.5
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 1.9e-66 256.9 295 45.1
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 1.7e-62 243.8 298 45.6
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 3.7e-62 242.7 283 43.5
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.8e-59 232.6 204 57.4
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 2.5e-58 229.9 254 46.1
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 8.2e-54 214.9 237 45.1
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 7.0e-53 211.8 299 44.1
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 1.9e-50 203.8 312 35.3
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.8e-48 197.2 202 50.5
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 9.8e-47 191.4 238 42.9
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 8.3e-46 188.3 264 39.4
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.0e-44 183.7 196 45.9
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.4e-37 161.0 187 47.6
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.0e-35 154.8 289 32.5
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 1.7e-35 154.1 172 47.7
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.2e-30 137.1 106 61.3
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 5.6e-26 122.5 122 46.7
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 9.5e-26 121.7 209 35.9
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 2.2e-22 110.5 283 29.0
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 1.9e-21 107.5 139 44.6
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.4e-21 107.1 139 44.6
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 4.1e-21 106.3 139 44.6
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 1.6e-20 104.4 121 43.0
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 3.6e-17 93.2 228 33.3
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 4.7e-17 92.8 120 44.2
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 6.2e-17 92.4 75 57.3
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 1.1e-16 91.7 72 58.3
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 1.1e-16 91.7 120 44.2
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 2.3e-16 90.5 95 47.4
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 5.8e-15 85.9 142 39.4
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 4.9e-14 82.8 120 35.8
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 7.1e-13 79.0 53 66.0
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 1.7e-11 74.3 114 35.1
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 6.6e-11 72.4 67 46.3
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 3.8e-06 56.6 83 39.8


User provided reference genes

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