Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 7.2e-167 590.5 296 100.0
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.2e-102 377.1 260 71.2
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 1.6e-102 376.7 265 69.8
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 1.6e-102 376.7 280 67.1
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 2.8e-102 375.9 274 68.6
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 4.7e-102 375.2 253 72.3
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 4.7e-102 375.2 253 71.5
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 1.1e-101 374.0 288 67.0
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 8.9e-101 370.9 253 71.9
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 1.3e-99 367.1 265 67.5
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 1.7e-99 366.7 282 64.9
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 2.9e-99 365.9 271 67.2
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 4.9e-99 365.2 282 64.2
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 6.4e-99 364.8 262 69.1
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 1.4e-98 363.6 286 66.1
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 2.4e-98 362.8 271 69.0
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 4.1e-98 362.1 248 71.8
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 7.1e-98 361.3 276 67.8
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 9.2e-98 360.9 269 69.1
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 9.2e-98 360.9 264 67.8
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 1.2e-97 360.5 262 67.2
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 1.0e-96 357.5 257 68.9
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 2.3e-96 356.3 268 66.8
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 3.0e-96 355.9 269 66.2
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 3.9e-96 355.5 248 68.1
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 6.6e-96 354.8 280 62.9
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 1.1e-95 354.0 248 68.1
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 1.1e-95 354.0 307 59.9
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 5.6e-95 351.7 246 69.1
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 7.3e-95 351.3 292 64.0
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 3.6e-94 349.0 280 62.1
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 1.1e-93 347.4 248 67.7
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 1.1e-93 347.4 248 68.5
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 1.1e-93 347.4 265 63.8
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 1.8e-93 346.7 232 73.7
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 5.2e-93 345.1 250 67.6
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 5.2e-93 345.1 286 61.9
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 1.5e-92 343.6 307 59.0
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.0e-92 343.2 258 64.7
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 2.6e-92 342.8 247 67.2
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 2.6e-92 342.8 290 62.4
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 3.4e-92 342.4 247 66.4
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 5.8e-92 341.7 247 66.8
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 5.8e-92 341.7 247 66.8
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 7.6e-92 341.3 276 61.6
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 7.6e-92 341.3 258 65.5
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 1.3e-91 340.5 253 65.6
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 2.9e-91 339.3 257 66.9
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.9e-91 339.3 288 60.4
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 3.8e-91 339.0 247 65.6
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 3.8e-91 339.0 232 70.7
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 3.8e-91 339.0 233 70.0
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 1.4e-90 337.0 263 65.4
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 1.9e-90 336.7 280 59.6
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 2.4e-90 336.3 297 58.2
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 2.4e-90 336.3 256 64.5
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 3.2e-90 335.9 247 65.6
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 4.2e-90 335.5 240 68.8
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 5.4e-90 335.1 228 72.4
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 2.1e-89 333.2 276 59.1
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 4.6e-89 332.0 229 67.7
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 4.6e-89 332.0 252 65.1
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.0e-88 330.9 244 67.2
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.7e-88 330.1 296 58.4
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 6.6e-88 328.2 255 63.1
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 6.6e-88 328.2 246 65.9
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 6.6e-88 328.2 279 59.9
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 8.7e-88 327.8 256 60.9
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 1.1e-87 327.4 301 58.8
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 1.5e-87 327.0 286 58.7
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 3.3e-87 325.9 251 60.6
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 5.6e-87 325.1 253 62.1
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 3.6e-86 322.4 256 62.5
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 8.1e-86 321.2 256 62.5
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 8.1e-86 321.2 256 62.5
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 4.0e-85 318.9 228 66.2
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 9.0e-85 317.8 228 65.8
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 2.6e-84 316.2 259 61.4
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.7e-83 313.5 229 65.5
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 2.2e-83 313.2 248 62.5
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 3.9e-80 302.4 249 59.0
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 3.6e-78 295.8 255 59.2
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 3.4e-76 289.3 203 70.0
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 7.6e-76 288.1 215 64.7
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 5.5e-74 282.0 208 64.9
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 7.1e-74 281.6 217 66.4
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 2.3e-72 276.6 252 55.2
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 8.1e-70 268.1 204 65.7
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 1.4e-69 267.3 264 55.3
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 1.8e-69 266.9 249 53.8
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 3.1e-69 266.2 205 65.9
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 1.2e-68 264.2 202 66.3
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 1.4e-66 257.3 176 70.5
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 7.1e-66 255.0 261 49.0
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 6.0e-65 251.9 183 63.9
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 1.9e-63 246.9 245 51.0
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 1.2e-60 237.7 226 57.5
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 7.6e-60 235.0 257 47.9
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 3.2e-58 229.6 255 48.2
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 7.9e-57 224.9 180 61.7
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.4e-53 214.2 171 63.7
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 2.8e-46 189.9 134 69.4
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 2.6e-44 183.3 248 42.3
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 2.7e-41 173.3 282 42.9
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 1.8e-32 144.1 170 44.7
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 3.7e-30 136.3 103 69.9
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 2.5e-26 123.6 299 32.4
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 6.3e-22 109.0 98 57.1
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.8e-21 107.5 98 55.1
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 1.2e-20 104.8 339 28.3
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 1.3e-14 84.7 261 29.9
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 5.4e-13 79.3 116 44.8
Ca_28940_v3 Cicer arietinum L. HOM05D001568 ORTHO05D148655 1.6e-12 77.8 264 24.6
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 2.8e-09 67.0 47 72.3
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 1.8e-08 64.3 69 49.3
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 5.7e-07 59.3 34 73.5


User provided reference genes

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