Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0739G163 Amborella trichopoda HOM05D005317 ORTHO05D005146 7.5e-104 380.6 197 100.0
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 2.0e-19 100.1 177 43.5
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 7.4e-19 98.2 167 40.7
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.6e-16 89.7 168 38.7
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 1.0e-15 87.8 172 39.5
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 5.0e-15 85.5 165 37.6
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 5.0e-15 85.5 178 37.6
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 8.5e-15 84.7 125 45.6
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 8.5e-15 84.7 160 38.8
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 8.5e-15 84.7 176 35.2
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 9.4e-14 81.3 172 36.0
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.2e-13 80.9 168 37.5
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.6e-13 80.5 166 36.7
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.1e-13 80.1 166 37.3
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 6.1e-13 78.6 162 36.4
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.0e-12 77.8 187 34.8
MBI16_g41241_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 1.8e-12 77.0 179 38.5
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 3.0e-12 76.3 170 37.1
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 3.0e-12 76.3 177 33.9
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 3.9e-12 75.9 167 34.7
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 5.2e-12 75.5 176 36.9
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 8.8e-12 74.7 178 36.0
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 1.1e-11 74.3 193 32.6
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 1.5e-11 73.9 169 38.5
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.5e-11 73.9 174 34.5
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 2.0e-11 73.6 170 34.7
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.6e-11 73.2 178 37.6
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 2.6e-11 73.2 166 34.3
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 4.4e-11 72.4 178 34.3
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 4.4e-11 72.4 162 35.2
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 5.7e-11 72.0 120 40.0
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 2.2e-10 70.1 175 34.9
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 2.8e-10 69.7 175 32.0
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 2.8e-10 69.7 177 31.6
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 2.8e-10 69.7 169 34.3
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 3.7e-10 69.3 178 32.0
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 4.8e-10 68.9 84 50.0
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 4.8e-10 68.9 184 32.1
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 8.2e-10 68.2 119 37.0
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 8.2e-10 68.2 169 33.7
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 1.1e-09 67.8 167 32.9
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 1.1e-09 67.8 169 30.8
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.8e-09 67.0 160 35.0
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 1.8e-09 67.0 187 32.1
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 1.8e-09 67.0 169 32.5
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 1.8e-09 67.0 160 36.2
Prupe.1G419200 Prunus persica HOM05D005317 ORTHO05D005146 3.1e-09 66.2 175 32.6
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 4.1e-09 65.9 163 33.7
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 4.1e-09 65.9 164 33.5
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 5.3e-09 65.5 167 35.3
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 5.3e-09 65.5 182 32.4
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 7.0e-09 65.1 163 33.7
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 7.0e-09 65.1 169 32.0
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 9.1e-09 64.7 181 33.1
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 1.6e-08 63.9 181 33.7
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.6e-08 63.9 181 32.6
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 1.6e-08 63.9 162 31.5
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 2.6e-08 63.2 175 34.3
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.6e-08 63.2 166 34.9
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 2.6e-08 63.2 172 33.1
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 2.6e-08 63.2 171 31.6
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 3.5e-08 62.8 159 31.4
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 3.5e-08 62.8 181 33.1
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 3.5e-08 62.8 167 32.9
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 4.5e-08 62.4 180 32.8
FAN28G2997 Fragaria x ananassa HOM05D005317 ORTHO05D005146 4.5e-08 62.4 181 32.0
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 5.9e-08 62.0 165 33.3
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 7.7e-08 61.6 170 34.1
Ciclev10029376m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.0e-07 61.2 191 29.8
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 1.0e-07 61.2 167 32.3
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 1.3e-07 60.8 170 33.5
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 2.2e-07 60.1 163 31.9
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 2.9e-07 59.7 200 33.5
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 2.9e-07 59.7 157 34.4
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 3.8e-07 59.3 174 31.0
Glyma.17G232900 Glycine max HOM05D005317 ORTHO05D005146 5.0e-07 58.9 163 30.1
PGSC0003DMG400004968 Solanum tuberosum HOM05D005317 ORTHO05D005146 5.0e-07 58.9 176 32.4
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 8.5e-07 58.2 117 37.6
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 1.1e-06 57.8 201 30.3
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 1.5e-06 57.4 171 29.2
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 2.5e-06 56.6 172 36.6
Glyma.14G089084 Glycine max HOM05D005317 ORTHO05D005146 4.2e-06 55.8 163 30.7
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 5.5e-06 55.5 166 33.1
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 7.2e-06 55.1 139 36.7
MBI16_g06081_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 7.2e-06 55.1 125 40.0
CDE04G2604 Ceratophyllum demersum HOM05D000375 ORTHO05D000240 9.4e-06 54.7 173 31.2
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 9.4e-06 54.7 178 29.2


User provided reference genes

Program Settings