Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0739G136 Amborella trichopoda HOM05D006534 ORTHO05D006434 6.5e-17 90.5 83 100.0
HPP92_006071 Vanilla planifolia HOM05D006534 ORTHO05D006434 2.7e-10 68.6 87 71.3
Gohir.D02G203600 Gossypium hirsutum HOM05D006534 ORTHO05D006434 3.2e-08 61.6 90 82.2
Gorai.005G230700 Gossypium raimondii HOM05D006534 ORTHO05D006434 3.2e-08 61.6 90 82.2
Potri.009G086900 Populus trichocarpa HOM05D006534 ORTHO05D006434 3.2e-08 61.6 97 62.9
Atru.chr5.2330 Acer truncatum HOM05D006534 ORTHO05D006434 1.2e-07 59.7 97 67.0
Thecc.02G118300 Theobroma cacao HOM05D006534 ORTHO05D006434 2.1e-07 58.9 90 70.0
Gohir.A03G181900 Gossypium hirsutum HOM05D006534 ORTHO05D006434 2.7e-07 58.5 90 81.1
TWI59G0168 Tripterygium wilfordii HOM05D006534 ORTHO05D006434 3.6e-07 58.2 91 82.4
Dinv42239 Davidia involucrata HOM05D006534 ORTHO05D006434 4.7e-07 57.8 93 63.4
HPP92_006076 Vanilla planifolia HOM05D006534 ORTHO05D006434 8.0e-07 57.0 71 47.9
Ah.01g007070 Amaranthus hybridus HOM05D006534 ORTHO05D006434 1.0e-06 56.6 102 58.8
CiPaw.06G165200 Carya illinoinensis HOM05D006534 ORTHO05D006434 1.0e-06 56.6 91 75.8
Duzib248G1096 Durio zibethinus HOM05D006534 ORTHO05D006434 1.0e-06 56.6 90 73.3
TWI14G1419 Tripterygium wilfordii HOM05D006534 ORTHO05D006434 1.0e-06 56.6 91 65.9
Cfa004668 Carpinus fangiana HOM05D006534 ORTHO05D006434 1.4e-06 56.2 97 73.2
PGR042G3724 Punica granatum HOM05D006534 ORTHO05D006434 1.8e-06 55.8 93 64.5
Ca_22100_v3 Cicer arietinum L. HOM05D006534 ORTHO05D006434 2.3e-06 55.5 88 65.9
Lj5g0022695 Lotus japonicus HOM05D006534 ORTHO05D006434 2.3e-06 55.5 97 51.5
GSVIVG01002630001 Vitis vinifera HOM05D006534 ORTHO05D006434 2.3e-06 55.5 83 66.3
Sc08g0004430 Simmondsia chinensis HOM05D006534 ORTHO05D006434 3.0e-06 55.1 92 56.5
Solyc09g098300.3 Solanum lycopersicum HOM05D006534 ORTHO05D006434 4.0e-06 54.7 92 75.0
TPR.G21131 Trifolium pratense HOM05D006534 ORTHO05D006434 4.0e-06 54.7 99 59.6
Aqoxy5G01709 Aquilegia oxysepala HOM05D006534 ORTHO05D006434 5.2e-06 54.3 95 60.0
CsaV3_4G000160 Cucumis sativus L. HOM05D006534 ORTHO05D006434 5.2e-06 54.3 93 64.5
Glyma.17G160200 Glycine max HOM05D006534 ORTHO05D006434 5.2e-06 54.3 84 54.8
Oeu013796.1 Olea europaea HOM05D006534 ORTHO05D006434 5.2e-06 54.3 92 65.2
Ciclev10026875m.g Citrus clementina HOM05D006534 ORTHO05D006434 8.8e-06 53.5 88 53.4


User provided reference genes

Program Settings