Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0739G043 Amborella trichopoda HOM05D000004 ORTHO05D021182 2.1e-85 318.9 154 100.0
Manes.12G101375 Manihot esculenta HOM05D000004 ORTHO05D000002 2.3e-15 86.3 94 45.7
Manes.14G045351 Manihot esculenta HOM05D000004 ORTHO05D000002 1.5e-14 83.6 94 44.7
Sopen07g017950 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 99 38.4
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 99 38.4
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-12 74.7 99 38.4
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-12 74.7 99 38.4
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-12 74.7 99 38.4
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-12 74.7 99 38.4
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-12 74.7 99 38.4
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-12 74.7 99 38.4
Sopen03g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-11 73.9 99 38.4
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-11 73.9 93 39.8
Sopen05g029610 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-11 73.9 99 37.4
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-11 73.9 93 39.8
Sopen01g025050 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-11 73.2 94 39.4
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 2.6e-11 72.8 63 50.8
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-11 72.8 116 38.8
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-11 72.8 116 38.8
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-11 72.8 116 38.8
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-11 72.8 116 38.8
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-11 72.4 93 39.8
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-11 72.0 93 39.8
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 5.8e-11 71.6 93 38.7
AUR62022350 Chenopodium quinoa HOM05D000004 ORTHO05D000002 7.6e-11 71.2 60 53.3
Potri.004G014401 Populus trichocarpa HOM05D000004 ORTHO05D000002 7.6e-11 71.2 89 41.6
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 7.6e-11 71.2 93 38.7
Sopen10g017950 Solanum pennellii HOM05D000014 ORTHO05D000016 7.6e-11 71.2 92 38.0
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-11 70.9 92 38.0
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-10 70.5 87 37.9
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-10 70.1 93 38.7
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-10 69.7 90 42.2
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-10 68.9 92 37.0
Sopen11g019750 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-10 68.6 92 38.0
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-10 68.2 87 39.1
AUR62029167 Chenopodium quinoa HOM05D000004 ORTHO05D000002 8.4e-10 67.8 82 42.7
AUR62036706 Chenopodium quinoa HOM05D007020 ORTHO05D000002 8.4e-10 67.8 58 53.4
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 8.4e-10 67.8 84 39.3
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 8.4e-10 67.8 99 35.4
Sopen08g005590 Solanum pennellii HOM05D000004 ORTHO05D000002 8.4e-10 67.8 92 38.0
CSS0034382 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-09 66.2 56 57.1
Sopen05g021280 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-09 66.2 87 39.1
Sopen11g014650 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-09 65.1 92 35.9
Sopen10g020250 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-09 64.7 79 39.2
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 1.6e-08 63.5 95 37.9
CSS0004422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-08 63.2 56 55.4
Sopen08g014710 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-08 63.2 107 32.7
CiPaw.04G042200 Carya illinoinensis HOM05D000004 ORTHO05D000002 2.7e-08 62.8 90 34.4
Sopen05g016250 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-08 62.4 92 37.0
Sopen12g020530 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-08 62.4 93 36.6
Sopen01g010650 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-08 61.2 90 36.7
Sopen08g015300 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-08 61.2 89 34.8
Sopen09g009570 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-08 61.2 73 38.4
EL10Ac8g19739 Beta vulgaris HOM05D000004 ORTHO05D000002 1.8e-07 60.1 98 38.8
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-07 60.1 71 38.0
CSS0010412 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.3e-07 59.7 55 54.5
SHI25119 Sapria himalayana HOM05D000004 ORTHO05D000002 2.3e-07 59.7 92 34.8
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-07 58.9 69 39.1
CiPaw.15G094100 Carya illinoinensis HOM05D000691 ORTHO05D000378 8.7e-07 57.8 83 33.7
Sopen02g007540 Solanum pennellii HOM05D000691 ORTHO05D000378 8.7e-07 57.8 83 33.7
THA.LOC104816062 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 8.7e-07 57.8 72 37.5
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-06 57.4 73 39.7
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.1e-06 57.4 71 36.6
Sopen03g009560 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.4 92 33.7
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.4 94 33.0
Sopen12g018380 Solanum pennellii HOM05D000691 ORTHO05D000378 1.1e-06 57.4 94 33.0
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-06 57.0 75 34.7
Ah.09g229590 Amaranthus hybridus HOM05D000004 ORTHO05D021182 1.9e-06 56.6 79 36.7
ClCG10G007950 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.9e-06 56.6 88 35.2
Ah.13g069290 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.3e-06 55.8 70 37.1
Sopen09g016390 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-06 55.8 69 37.7
Manes.S035016 Manihot esculenta HOM05D000004 ORTHO05D000002 4.3e-06 55.5 74 39.2
RcHm_v2.0_Chr2g0142791 Rosa chinensis HOM05D011008 ORTHO05D015283 4.3e-06 55.5 93 35.5
RcHm_v2.0_Chr7g0200201 Rosa chinensis HOM05D000004 ORTHO05D000002 4.3e-06 55.5 93 35.5
Sopen08g011070 Solanum pennellii HOM05D000014 ORTHO05D000016 4.3e-06 55.5 60 41.7
Ah.15g100080 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.6e-06 55.1 66 37.9
CSS0009193 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.6e-06 55.1 49 55.1
FvH4_1g23712 Fragaria vesca HOM05D000004 ORTHO05D000002 7.4e-06 54.7 76 34.2
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 7.4e-06 54.7 94 33.0
FvH4_1g29809 Fragaria vesca HOM05D000004 ORTHO05D000002 9.6e-06 54.3 81 33.3
Sopen00g013620 Solanum pennellii HOM05D000004 ORTHO05D000002 9.6e-06 54.3 94 31.9
Sopen04g014250 Solanum pennellii HOM05D000004 ORTHO05D000378 9.6e-06 54.3 87 34.5
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 9.6e-06 54.3 94 31.9
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 9.6e-06 54.3 94 31.9


User provided reference genes

Program Settings