Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0739G025 Amborella trichopoda HOM05D000066 ORTHO05D066428 7.1e-49 196.8 91 100.0
ATR0739G056 Amborella trichopoda HOM05D000066 ORTHO05D000055 1.6e-16 89.4 52 90.4
ATR0739G074 Amborella trichopoda HOM05D000066 ORTHO05D000055 3.6e-16 88.2 52 88.5
ATR0739G157 Amborella trichopoda HOM05D000066 ORTHO05D069149 2.3e-15 85.5 49 85.7
Peaxi162Scf00286g01034 Petunia axillaris HOM05D000066 ORTHO05D000055 5.1e-07 57.8 49 53.1
Aqoxy5G04372 Aquilegia oxysepala HOM05D000066 ORTHO05D000055 6.7e-07 57.4 66 42.4
TAR636G0850 Trochodendron aralioides HOM05D000066 ORTHO05D000055 1.1e-06 56.6 24 87.5
TAR636G3087 Trochodendron aralioides HOM05D000066 ORTHO05D000055 1.1e-06 56.6 24 87.5
Ca_21209_v3 Cicer arietinum L. HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
Haze_22233 Corylus avellana HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
Duzib150G1292 Durio zibethinus HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
Nn2g12675 Nelumbo nucifera HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
QL03p052917 Quercus lobata HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
QL03p052925 Quercus lobata HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
QL03p052965 Quercus lobata HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
QL03p052969 Quercus lobata HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
Thecc.09G170200 Theobroma cacao HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
GSVIVG01029173001 Vitis vinifera HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
GSVIVG01029175001 Vitis vinifera HOM05D000066 ORTHO05D000055 3.3e-06 55.1 22 90.9
COL.COLO4_04644 Corchorus olitorius HOM05D000066 ORTHO05D000055 4.4e-06 54.7 22 90.9
Glyma.17G065300 Glycine max HOM05D000066 ORTHO05D000055 4.4e-06 54.7 23 87.0
arahy.Tifrunner.gnm1.ann1.3BDP96 Arachis hypogaea HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
arahy.Tifrunner.gnm1.ann1.BWTU0I Arachis hypogaea HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
CSS0000803 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
CSS0046687 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
CSS0047119 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Cfa013610 Carpinus fangiana HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
ClCG06G008880 Citrullus lanatus HOM05D000066 ORTHO05D000055 5.7e-06 54.3 92 35.9
Dinv25397 Davidia involucrata HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Dinv26454 Davidia involucrata HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Dinv41263 Davidia involucrata HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Glyma.13G094900 Glycine max HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Glyma.13G103100 Glycine max HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Glyma.17G065400 Glycine max HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
MBI16_g29054_MAGBIO Magnolia biondii HOM05D000066 ORTHO05D021173 5.7e-06 54.3 24 83.3
Manes.14G114500 Manihot esculenta HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Medtr4g126920 Medicago truncatula HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Medtr4g128590 Medicago truncatula HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Nn2g12674 Nelumbo nucifera HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Nn2g12676 Nelumbo nucifera HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Nn2g12681 Nelumbo nucifera HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Oeu042144.2 Olea europaea HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
PSO541G4099 Papaver somniferum HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Phvul.003G137600 Phaseolus vulgaris HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
Potri.002G236200 Populus trichocarpa HOM05D000066 ORTHO05D000055 5.7e-06 54.3 43 55.8
QL02p097472 Quercus lobata HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
TAR383G0394 Trochodendron aralioides HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
VMungo1215G2919 Vigna mungo HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
GSVIVG01029160001 Vitis vinifera HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
GSVIVG01029162001 Vitis vinifera HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
GSVIVG01029165001 Vitis vinifera HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
GSVIVG01029171001 Vitis vinifera HOM05D000066 ORTHO05D000055 5.7e-06 54.3 22 90.9
ATR0580G140 Amborella trichopoda HOM05D000066 ORTHO05D000055 7.4e-06 53.9 22 86.4
ATR0752G030 Amborella trichopoda HOM05D000066 ORTHO05D000055 7.4e-06 53.9 22 86.4
ATR0752G148 Amborella trichopoda HOM05D000066 ORTHO05D000055 7.4e-06 53.9 22 86.4
ATR0752G198 Amborella trichopoda HOM05D000066 ORTHO05D000055 7.4e-06 53.9 22 86.4
Eucgr.A01968 Eucalyptus grandis HOM05D000066 ORTHO05D000055 7.4e-06 53.9 23 82.6
Gohir.A02G017600 Gossypium hirsutum HOM05D000066 ORTHO05D000055 7.4e-06 53.9 51 49.0
Gohir.D02G019800 Gossypium hirsutum HOM05D000066 ORTHO05D000055 7.4e-06 53.9 51 49.0
Gorai.005G025000 Gossypium raimondii HOM05D000066 ORTHO05D000055 7.4e-06 53.9 51 49.0
MD04G1020100 Malus domestica HOM05D000066 ORTHO05D000055 7.4e-06 53.9 47 51.1
Nn1g06065 Nelumbo nucifera HOM05D000066 ORTHO05D000055 7.4e-06 53.9 24 83.3
Prupe.1G088600 Prunus persica HOM05D000066 ORTHO05D000055 7.4e-06 53.9 22 86.4
Rhsim03G0263700 Rhododendron simsii HOM05D000066 ORTHO05D000055 7.4e-06 53.9 22 86.4
Aqoxy7G03111 Aquilegia oxysepala HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
arahy.Tifrunner.gnm1.ann1.S987R3 Arachis hypogaea HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 87.0
Cpa.g.sc233.26 Carica papaya HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 86.4
CiPaw.07G190300 Carya illinoinensis HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 86.4
Cc06_g13400 Coffea canephora HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 87.0
ECA236G3740 Erigeron canadensis HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 82.6
ECA236G4243 Erigeron canadensis HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 86.4
Eucgr.C00180 Eucalyptus grandis HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
Eucgr.C00181 Eucalyptus grandis HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
Glyma.13G095200 Glycine max HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 86.4
Lsat_1_v5_gn_8_67301 Lactuca sativa HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 82.6
Lsat_1_v5_gn_8_67360 Lactuca sativa HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 82.6
Lsat_1_v5_gn_8_67401 Lactuca sativa HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 82.6
Lsat_1_v5_gn_8_67581 Lactuca sativa HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 82.6
Lj4g0000077 Lotus japonicus HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
MD13G1237300 Malus domestica HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
Manes.11G115200 Manihot esculenta HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
Nn1g08138 Nelumbo nucifera HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 87.0
Nitab4.5_0000404g0110 Nicotiana tabacum HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
Nitab4.5_0000833g0010 Nicotiana tabacum HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
PSO339G3599 Papaver somniferum HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 87.0
PSO384G2705 Papaver somniferum HOM05D000066 ORTHO05D000055 9.7e-06 53.5 23 87.0
Peaxi162Scf00315g00820 Petunia axillaris HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
Peaxi162Scf00610g00353 Petunia axillaris HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 86.4
PGR044G2429 Punica granatum HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
PGR142G1896 Punica granatum HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 86.4
QL02p097440 Quercus lobata HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
QL11p009899 Quercus lobata HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 90.9
Rhsim01G0006400 Rhododendron simsii HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 86.4
Rhsim01G0125700 Rhododendron simsii HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 86.4
Solyc09g092520.3 Solanum lycopersicum HOM05D000066 ORTHO05D000055 9.7e-06 53.5 24 83.3
Sopen09g035420 Solanum pennellii HOM05D000066 ORTHO05D000055 9.7e-06 53.5 24 83.3
PGSC0003DMG400021877 Solanum tuberosum HOM05D000066 ORTHO05D000055 9.7e-06 53.5 24 83.3
vmacro13113 Vaccinium macrocarpon HOM05D000066 ORTHO05D000055 9.7e-06 53.5 22 86.4


User provided reference genes

Program Settings