Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 1.1e-303 1045.8 510 100.0
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 7.4e-228 793.9 503 74.2
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 9.6e-228 793.5 509 73.1
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 1.6e-227 792.7 507 72.0
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 8.1e-227 790.4 505 73.5
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 7.6e-225 783.9 503 73.8
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 1.3e-224 783.1 503 73.4
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 1.2e-222 776.5 485 74.2
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 1.2e-222 776.5 496 72.4
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.0e-221 771.9 495 73.3
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 3.0e-221 771.9 494 72.9
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 3.9e-221 771.5 503 71.8
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 9.6e-220 766.9 496 73.0
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 1.6e-219 766.1 501 71.7
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 2.1e-219 765.8 498 71.9
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.8e-219 765.4 505 71.1
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.8e-219 765.4 505 71.1
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 3.7e-219 765.0 488 73.0
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 6.2e-219 764.2 503 72.4
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 5.3e-218 761.1 501 71.5
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 4.5e-217 758.1 503 70.6
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.0e-216 756.9 503 70.8
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 2.9e-216 755.4 497 70.8
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 2.9e-216 755.4 502 70.5
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 6.5e-216 754.2 498 70.5
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.4e-215 753.1 498 71.9
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.9e-215 752.7 504 69.8
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 1.9e-215 752.7 477 74.0
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 3.2e-215 751.9 504 70.0
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 9.3e-215 750.4 503 70.4
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 9.3e-215 750.4 477 73.4
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 2.1e-214 749.2 519 67.4
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 2.7e-214 748.8 503 70.2
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 7.9e-214 747.3 502 70.1
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.0e-213 746.9 494 71.5
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.0e-213 746.9 509 69.4
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 1.3e-213 746.5 502 69.3
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.8e-213 746.1 497 69.6
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 3.0e-213 745.3 543 65.0
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 3.9e-213 745.0 503 70.2
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 5.1e-213 744.6 489 70.3
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.1e-212 743.4 494 70.6
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 1.1e-212 743.4 499 71.3
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 2.5e-212 742.3 498 70.7
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 2.5e-212 742.3 503 70.2
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.3e-212 741.9 493 70.8
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 3.3e-212 741.9 500 69.8
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.3e-212 741.5 493 71.0
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.3e-211 740.0 500 70.8
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 2.8e-211 738.8 504 69.8
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.8e-211 738.8 504 69.0
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 2.8e-211 738.8 483 71.4
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 3.7e-211 738.4 503 70.6
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 3.7e-211 738.4 502 70.1
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 8.2e-211 737.3 501 68.3
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 2.4e-210 735.7 501 70.7
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 1.2e-209 733.4 502 68.1
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 2.0e-209 732.6 498 69.5
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.6e-209 732.3 500 69.6
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.5e-209 731.5 500 69.6
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.0e-208 730.3 480 69.2
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 1.7e-208 729.6 497 69.0
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 3.8e-208 728.4 498 70.1
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 3.8e-208 728.4 483 70.6
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 3.8e-208 728.4 502 69.1
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 6.5e-208 727.6 499 69.1
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.9e-207 726.1 486 69.5
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 1.6e-206 723.0 501 67.5
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.1e-206 722.6 496 67.5
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 3.0e-205 718.8 464 73.3
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.3e-204 715.3 465 72.3
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 9.7e-204 713.8 487 69.0
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 2.8e-203 712.2 447 73.8
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 9.1e-202 707.2 470 70.4
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.0e-201 706.1 481 68.6
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 4.5e-201 704.9 503 67.4
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 1.3e-200 703.4 495 68.3
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.7e-200 703.0 481 68.4
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 4.2e-199 698.4 499 67.3
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 5.5e-199 698.0 509 65.0
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 7.2e-199 697.6 501 67.5
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 9.4e-199 697.2 453 71.7
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 6.1e-198 694.5 451 72.1
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 7.9e-198 694.1 501 65.9
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 1.5e-196 689.9 491 66.8
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 2.0e-196 689.5 497 66.8
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 2.0e-196 689.5 497 67.0
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 2.0e-196 689.5 497 66.8
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 2.2e-195 686.0 513 64.7
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 2.0e-193 679.5 491 67.4
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 4.5e-193 678.3 505 66.3
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 5.5e-191 671.4 519 64.2
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 9.4e-191 670.6 546 61.7
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 1.0e-181 640.6 479 64.9
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 1.4e-173 613.6 498 61.6
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 9.8e-172 607.4 497 57.9
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 1.6e-158 563.5 378 71.2
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.8e-149 533.5 370 69.5
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 5.4e-138 495.4 352 65.6
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 1.7e-136 490.3 358 65.4
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 2.4e-133 479.9 354 64.4
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.2e-115 420.2 488 47.5
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.4e-109 401.0 303 63.4
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.9e-107 393.3 311 60.5
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 5.1e-96 355.9 232 68.1
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 8.8e-88 328.6 214 67.8
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.5e-71 274.6 172 74.4
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 8.2e-70 268.9 183 65.6
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.1e-61 241.9 141 79.4
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 5.3e-61 239.6 148 72.3
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 7.1e-21 106.3 103 56.3
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 5.1e-11 73.6 79 46.8
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.9e-10 71.6 51 62.7
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.5e-10 71.2 79 48.1


User provided reference genes

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