Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0737G136 Amborella trichopoda HOM05D006694 ORTHO05D008240 1.2e-49 202.2 107 100.0
ATR0737G153 Amborella trichopoda HOM05D006694 ORTHO05D008240 7.8e-28 129.8 97 68.0
ATR0681G086 Amborella trichopoda HOM05D006694 ORTHO05D008240 4.4e-23 114.0 92 64.1
ATR1128G092 Amborella trichopoda HOM05D006694 ORTHO05D008240 1.2e-20 105.9 103 57.3
ATR0712G084 Amborella trichopoda HOM05D014578 ORTHO05D008240 1.9e-18 98.6 76 64.5
ATR0697G204 Amborella trichopoda HOM05D006694 ORTHO05D008240 1.8e-16 92.0 78 60.3
ATR1128G031 Amborella trichopoda HOM05D006694 ORTHO05D008240 9.9e-15 86.3 74 56.8
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 3.0e-11 74.7 89 41.6
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 8.7e-11 73.2 102 38.2
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 1.1e-10 72.8 103 37.9
Haze_21398 Corylus avellana HOM05D000162 ORTHO05D000090 7.3e-10 70.1 105 29.5
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 7.3e-10 70.1 104 36.5
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 2.1e-09 68.6 105 35.2
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 2.1e-09 68.6 102 32.4
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 2.1e-09 68.6 107 29.9
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 2.8e-09 68.2 102 34.3
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 2.8e-09 68.2 107 30.8
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 3.6e-09 67.8 95 36.8
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 3.6e-09 67.8 107 31.8
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 4.7e-09 67.4 107 34.6
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 8.1e-09 66.6 106 33.0
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 1.1e-08 66.2 107 29.0
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 1.8e-08 65.5 103 34.0
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 1.8e-08 65.5 107 32.7
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.8e-08 65.5 106 32.1
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 2.4e-08 65.1 103 35.0
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 2.4e-08 65.1 106 32.1
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.4e-08 65.1 106 32.1
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 2.4e-08 65.1 83 38.6
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.1e-08 64.7 106 33.0
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 3.1e-08 64.7 102 32.4
QL04p064892 Quercus lobata HOM05D000162 ORTHO05D000090 4.0e-08 64.3 88 33.0
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 5.3e-08 63.9 102 35.3
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 5.3e-08 63.9 105 31.4
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 6.9e-08 63.5 99 29.3
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 6.9e-08 63.5 107 28.0
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 6.9e-08 63.5 108 27.8
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 9.0e-08 63.2 104 31.7
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 9.0e-08 63.2 87 34.5
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 9.0e-08 63.2 103 34.0
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 9.0e-08 63.2 103 34.0
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-07 62.8 107 32.7
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-07 62.8 107 32.7
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 1.2e-07 62.8 91 34.1
MD15G1400000 Malus domestica HOM05D006694 ORTHO05D008240 1.5e-07 62.4 83 39.8
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 1.5e-07 62.4 103 33.0
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 2.0e-07 62.0 102 34.3
Ca_07240_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 2.6e-07 61.6 107 33.6
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 2.6e-07 61.6 92 33.7
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.4e-07 61.2 106 33.0
ATR0730G050 Amborella trichopoda HOM05D006694 ORTHO05D008240 4.4e-07 60.8 48 62.5
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 4.4e-07 60.8 102 29.4
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 4.4e-07 60.8 109 28.4
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 5.8e-07 60.5 101 33.7
Nn3g18307 Nelumbo nucifera HOM05D000162 ORTHO05D000090 5.8e-07 60.5 89 36.0
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 5.8e-07 60.5 104 32.7
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.6e-07 60.1 103 29.1
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.6e-07 60.1 103 29.1
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 7.6e-07 60.1 102 31.4
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 7.6e-07 60.1 90 31.1
arahy.Tifrunner.gnm1.ann1.5GFX18 Arachis hypogaea HOM05D000162 ORTHO05D000090 9.9e-07 59.7 117 30.8
Dinv06480 Davidia involucrata HOM05D000162 ORTHO05D000090 9.9e-07 59.7 93 35.5
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 1.3e-06 59.3 87 29.9
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 1.7e-06 58.9 89 38.2
Eucgr.G03208 Eucalyptus grandis HOM05D006694 ORTHO05D008240 1.7e-06 58.9 82 37.8
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.7e-06 58.9 103 32.0
MBI11_g34855_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 2.2e-06 58.5 92 35.9
THA.LOC104808474 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 2.2e-06 58.5 116 33.6
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 2.9e-06 58.2 108 25.9
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 2.9e-06 58.2 103 31.1
HPP92_025503 Vanilla planifolia HOM05D062792 ORTHO05D008240 2.9e-06 58.2 84 34.5
HPP92_025533 Vanilla planifolia HOM05D062792 ORTHO05D008240 2.9e-06 58.2 84 34.5
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 3.8e-06 57.8 91 29.7
QL03p013111 Quercus lobata HOM05D000162 ORTHO05D000090 4.9e-06 57.4 108 31.5
Actinidia06229 Actinidia chinensis HOM05D000162 ORTHO05D000090 6.4e-06 57.0 88 33.0
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 6.4e-06 57.0 103 31.1
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 6.4e-06 57.0 108 30.6
QL04p064912 Quercus lobata HOM05D000162 ORTHO05D000090 6.4e-06 57.0 72 37.5
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 6.4e-06 57.0 107 28.0
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 6.4e-06 57.0 109 31.2
EL10Ac4g09485 Beta vulgaris HOM05D000162 ORTHO05D000090 8.4e-06 56.6 106 32.1
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 8.4e-06 56.6 91 34.1
MBI11_g20198_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 8.4e-06 56.6 107 27.1
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 8.4e-06 56.6 109 29.4
vmacro15413 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 8.4e-06 56.6 108 26.9


User provided reference genes

Program Settings