Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0737G097 Amborella trichopoda HOM05D006968 ORTHO05D008748 1.1e-96 356.7 184 100.0
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 4.5e-26 122.1 152 47.4
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 1.3e-25 120.6 162 40.1
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 2.5e-24 116.3 129 48.8
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 3.2e-24 115.9 162 41.4
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 1.6e-23 113.6 150 45.3
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 2.7e-23 112.8 169 40.8
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 4.6e-23 112.1 150 42.7
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 6.1e-23 111.7 129 45.7
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 1.8e-22 110.2 129 45.0
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 2.3e-22 109.8 162 40.1
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 1.1e-21 107.5 129 43.4
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 1.5e-21 107.1 151 41.7
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 4.3e-21 105.5 156 41.7
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 7.4e-21 104.8 127 47.2
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 7.4e-21 104.8 127 47.2
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 7.4e-21 104.8 126 43.7
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 2.2e-20 103.2 129 43.4
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 6.3e-20 101.7 151 38.4
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 8.2e-20 101.3 134 39.6
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 1.8e-19 100.1 152 39.5
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 2.4e-19 99.8 162 40.1
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 3.1e-19 99.4 152 40.1
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 6.9e-19 98.2 152 38.2
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 9.1e-19 97.8 126 43.7
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 1.2e-18 97.4 159 40.3
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 1.5e-18 97.1 152 38.8
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 2.0e-18 96.7 151 43.7
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 2.6e-18 96.3 158 36.1
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 2.6e-18 96.3 126 41.3
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 4.5e-18 95.5 152 38.8
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 5.9e-18 95.1 152 38.8
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 5.9e-18 95.1 145 38.6
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 7.7e-18 94.7 152 40.8
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 7.7e-18 94.7 153 37.9
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 7.7e-18 94.7 129 40.3
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 1.0e-17 94.4 152 36.2
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 1.7e-17 93.6 129 38.0
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.7e-17 93.6 129 38.0
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 1.7e-17 93.6 162 37.7
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 2.2e-17 93.2 129 38.0
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 2.2e-17 93.2 146 38.4
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 2.9e-17 92.8 131 38.2
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 3.8e-17 92.4 156 38.5
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 3.8e-17 92.4 129 37.2
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 5.0e-17 92.0 130 42.3
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 6.5e-17 91.7 160 36.2
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 6.5e-17 91.7 153 37.9
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 6.5e-17 91.7 150 36.7
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 8.5e-17 91.3 151 40.4
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 1.4e-16 90.5 163 36.8
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 1.9e-16 90.1 160 35.6
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 4.2e-16 89.0 146 34.2
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 7.2e-16 88.2 162 35.8
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 9.4e-16 87.8 168 36.9
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 9.4e-16 87.8 123 41.5
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 2.7e-15 86.3 154 35.7
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 6.1e-15 85.1 122 41.0
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 7.9e-15 84.7 148 39.9
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 1.0e-14 84.3 147 38.1
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 1.4e-14 84.0 165 34.5
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 1.4e-14 84.0 131 35.9
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 1.8e-14 83.6 161 37.3
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 2.3e-14 83.2 163 33.1
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 3.9e-14 82.4 150 35.3
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 3.9e-14 82.4 164 35.4
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 3.9e-14 82.4 155 33.5
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 5.1e-14 82.0 151 36.4
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 6.7e-14 81.6 131 35.9
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 1.1e-13 80.9 152 36.2
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.5e-13 80.5 151 35.8
Migut.M00982 Erythranthe guttata HOM05D006968 ORTHO05D008748 2.0e-13 80.1 125 37.6
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 2.0e-13 80.1 134 34.3
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 2.0e-13 80.1 153 35.9
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 4.4e-13 79.0 164 33.5
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 9.7e-13 77.8 142 35.9
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 9.7e-13 77.8 150 34.0
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 9.7e-13 77.8 154 32.5
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 1.7e-12 77.0 149 32.2
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 1.7e-12 77.0 149 32.2
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 2.8e-12 76.3 162 30.9
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 3.7e-12 75.9 146 32.2
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 4.8e-12 75.5 157 33.8
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 5.3e-11 72.0 161 32.3
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 7.0e-11 71.6 153 33.3
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 1.6e-10 70.5 132 33.3
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 2.0e-10 70.1 155 33.5
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 5.9e-10 68.6 144 32.6
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 7.7e-10 68.2 148 33.1
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 1.3e-09 67.4 156 31.4
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 1.7e-09 67.0 134 30.6
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 1.7e-09 67.0 134 30.6
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 2.9e-09 66.2 117 39.3
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 2.9e-09 66.2 127 33.9
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 3.8e-09 65.9 162 29.6
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 5.0e-09 65.5 169 30.2
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 6.5e-09 65.1 169 30.2
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 6.5e-09 65.1 140 32.1
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 1.5e-08 63.9 152 29.6
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 3.2e-08 62.8 155 31.6
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 4.2e-08 62.4 134 29.1
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 4.2e-08 62.4 158 30.4
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.2e-07 60.8 90 40.0
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 1.6e-07 60.5 90 40.0


User provided reference genes

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