Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 3.4e-61 238.0 113 100.0
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.7e-44 182.6 107 85.0
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 1.4e-25 119.8 108 53.7
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 1.5e-24 116.3 108 53.7
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.5e-24 116.3 108 53.7
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 3.4e-24 115.2 108 51.9
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.7e-23 112.8 108 50.9
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 3.7e-23 111.7 108 52.8
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 3.7e-23 111.7 108 52.8
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 4.9e-23 111.3 108 48.1
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 3.2e-22 108.6 108 48.1
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 5.4e-22 107.8 109 49.5
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 5.4e-22 107.8 109 49.5
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 7.0e-22 107.5 108 47.2
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 1.2e-21 106.7 106 50.9
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.0e-21 105.9 103 50.5
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 2.0e-21 105.9 108 45.4
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 2.7e-21 105.5 108 49.1
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 2.7e-21 105.5 106 50.9
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 2.7e-21 105.5 110 49.1
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 3.5e-21 105.1 108 47.2
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 3.5e-21 105.1 108 45.4
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 4.6e-21 104.8 108 47.2
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 4.6e-21 104.8 108 48.1
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 5.9e-21 104.4 104 51.9
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 5.9e-21 104.4 108 45.4
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 7.8e-21 104.0 104 51.0
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 1.0e-20 103.6 102 50.0
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.0e-20 103.6 108 44.4
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.7e-20 102.8 106 48.1
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.7e-20 102.8 102 51.0
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 1.7e-20 102.8 102 49.0
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.3e-20 102.4 108 47.2
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 2.3e-20 102.4 106 50.0
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 2.3e-20 102.4 99 50.5
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 3.0e-20 102.1 108 44.4
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 3.9e-20 101.7 105 50.5
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 3.9e-20 101.7 105 50.5
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 3.9e-20 101.7 102 51.0
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 3.9e-20 101.7 106 49.1
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 3.9e-20 101.7 118 46.6
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 3.9e-20 101.7 102 50.0
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 5.0e-20 101.3 106 47.2
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 5.0e-20 101.3 108 47.2
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 5.0e-20 101.3 108 44.4
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 8.6e-20 100.5 106 49.1
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 1.1e-19 100.1 101 48.5
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.1e-19 100.1 104 48.1
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 1.5e-19 99.8 109 48.6
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.9e-19 99.4 106 46.2
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 1.9e-19 99.4 104 47.1
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 1.9e-19 99.4 104 42.3
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 1.9e-19 99.4 118 46.6
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 1.9e-19 99.4 102 48.0
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 2.5e-19 99.0 105 49.5
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 2.5e-19 99.0 105 49.5
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 2.5e-19 99.0 108 42.6
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 3.3e-19 98.6 102 50.0
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 3.3e-19 98.6 106 48.1
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 3.3e-19 98.6 102 45.1
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 3.3e-19 98.6 104 48.1
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 4.3e-19 98.2 102 49.0
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 5.6e-19 97.8 106 46.2
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 7.3e-19 97.4 107 46.7
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 7.3e-19 97.4 102 49.0
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 7.3e-19 97.4 106 45.3
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 1.2e-18 96.7 103 46.6
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 2.8e-18 95.5 107 44.9
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 2.8e-18 95.5 102 46.1
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 2.8e-18 95.5 107 45.8
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 3.6e-18 95.1 102 47.1
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 4.7e-18 94.7 108 41.7
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 8.0e-18 94.0 109 47.7
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 1.4e-17 93.2 102 45.1
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 1.4e-17 93.2 112 43.8
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 2.3e-17 92.4 108 44.4
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 3.1e-17 92.0 103 44.7
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 4.0e-17 91.7 106 45.3
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 6.8e-17 90.9 102 46.1
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 8.9e-17 90.5 110 42.7
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 8.9e-17 90.5 110 42.7
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 1.2e-16 90.1 109 41.3
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 2.6e-16 89.0 103 44.7
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 7.5e-16 87.4 104 43.3
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 2.9e-15 85.5 110 40.9
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.1e-14 83.6 91 46.2
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 2.7e-13 79.0 108 39.8
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 2.5e-11 72.4 106 36.8
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 9.5e-11 70.5 106 39.6
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 9.5e-11 70.5 106 39.6
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 1.6e-10 69.7 105 40.0
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 1.6e-10 69.7 105 40.0
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 1.6e-10 69.7 110 35.5
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 6.8e-09 64.3 84 46.4
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 6.8e-09 64.3 104 41.3
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 2.6e-08 62.4 51 52.9
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 5.8e-08 61.2 47 57.4
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 4.9e-07 58.2 80 42.5
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 1.1e-06 57.0 104 39.4
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 1.4e-06 56.6 111 27.9
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 1.9e-06 56.2 85 40.0
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 4.1e-06 55.1 85 38.8


User provided reference genes

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