Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 2.7e-252 874.8 424 100.0
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 9.2e-200 700.3 422 77.3
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 2.3e-195 685.6 424 74.8
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 6.6e-190 667.5 424 71.7
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 8.1e-188 660.6 424 71.0
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 8.1e-188 660.6 424 70.8
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.1e-187 660.2 422 74.4
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 4.0e-187 658.3 424 70.8
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.5e-186 656.4 419 71.1
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 2.6e-186 655.6 425 71.1
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 4.4e-186 654.8 424 70.8
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 4.4e-186 654.8 424 70.3
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 7.6e-186 654.1 424 71.0
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 9.9e-186 653.7 422 70.9
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 3.8e-185 651.7 425 70.1
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 4.9e-185 651.4 425 69.9
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 6.4e-185 651.0 410 72.2
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 2.4e-184 649.0 424 69.8
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 2.4e-184 649.0 424 69.6
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 9.2e-184 647.1 425 71.5
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 2.1e-183 646.0 424 69.1
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 2.7e-183 645.6 424 70.3
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.7e-183 645.6 422 69.2
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 4.6e-183 644.8 424 68.6
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 6.0e-183 644.4 423 69.5
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 1.3e-182 643.3 412 70.1
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.7e-182 642.9 426 68.5
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 2.3e-182 642.5 417 70.3
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 6.6e-182 641.0 410 71.0
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 6.6e-182 641.0 427 68.6
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 1.5e-181 639.8 419 68.0
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 1.5e-181 639.8 410 70.5
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 3.3e-181 638.6 422 68.7
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 5.6e-181 637.9 422 67.8
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 2.1e-180 636.0 417 69.5
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 4.7e-180 634.8 424 68.9
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 8.1e-180 634.0 419 67.5
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.1e-179 633.6 424 67.0
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.8e-179 632.9 419 70.6
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.8e-179 632.9 418 68.4
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 1.8e-179 632.9 425 67.5
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 3.1e-179 632.1 415 70.8
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 4.0e-179 631.7 425 67.1
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 9.0e-179 630.6 425 67.3
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 2.6e-178 629.0 422 67.5
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 4.4e-178 628.2 425 67.3
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 7.6e-178 627.5 419 67.5
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 3.8e-177 625.2 412 69.4
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 4.9e-177 624.8 425 67.5
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 8.4e-177 624.0 384 73.2
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 5.4e-176 621.3 450 65.3
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 5.4e-176 621.3 425 67.5
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 7.1e-176 620.9 422 67.1
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 9.3e-176 620.5 422 66.8
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.2e-175 620.2 412 68.9
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.6e-175 619.8 424 68.2
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 2.7e-175 619.0 419 67.3
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.5e-175 618.6 412 69.2
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 6.0e-175 617.8 422 66.1
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 6.0e-175 617.8 420 68.6
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.0e-174 617.1 422 66.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.3e-174 616.7 422 66.8
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 3.9e-174 615.1 418 66.7
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 8.7e-174 614.0 425 68.0
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 1.5e-173 613.2 422 66.1
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 3.3e-173 612.1 422 66.1
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 4.3e-173 611.7 424 66.0
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 4.3e-173 611.7 422 66.1
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 4.3e-173 611.7 422 66.4
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 9.6e-173 610.5 423 66.9
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.3e-172 610.1 422 66.1
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.6e-172 609.8 412 68.0
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 8.1e-172 607.4 422 65.6
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.0e-170 602.8 425 66.6
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 9.9e-170 600.5 421 65.3
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 4.6e-167 591.7 402 66.7
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.0e-166 590.5 540 54.8
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.8e-164 582.4 417 64.5
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 2.4e-163 579.3 402 66.4
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.7e-161 573.2 408 64.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 9.3e-160 567.4 412 64.6
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 2.8e-156 555.8 433 60.3
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.1e-152 543.9 414 61.6
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.9e-152 543.1 410 63.9
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 1.9e-152 543.1 467 56.5
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.9e-152 543.1 457 58.9
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 4.8e-148 528.5 384 63.0
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 1.4e-147 526.9 390 64.4
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 2.4e-147 526.2 405 62.5
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 3.3e-141 505.8 311 74.0
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.3e-140 503.8 313 70.9
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 9.1e-139 497.7 364 64.8
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 4.2e-128 462.2 377 60.7
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 2.0e-117 426.8 424 53.1
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 8.6e-97 358.2 343 46.4
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 2.5e-88 330.1 349 44.7
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 3.3e-88 329.7 214 69.2
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 5.8e-85 318.9 346 45.7
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 2.9e-84 316.6 205 68.8
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 8.3e-84 315.1 204 69.1
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 2.7e-74 283.5 347 38.0
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 2.4e-59 233.8 280 38.9
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 1.4e-43 181.4 106 74.5
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.8e-38 164.5 103 69.9
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 4.5e-37 159.8 114 65.8
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 4.5e-37 159.8 114 65.8
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 2.2e-36 157.5 103 68.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 3.2e-35 153.7 85 78.8
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 2.9e-28 130.6 138 53.6
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 5.9e-13 79.7 49 75.5
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.3e-12 78.6 49 75.5
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.8e-12 77.0 50 72.0
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.4e-09 68.6 48 68.8
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 3.3e-08 63.9 62 51.6
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.1e-06 58.9 45 57.8


User provided reference genes

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