Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 4.9e-101 371.3 211 100.0
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 7.4e-49 198.0 144 75.0
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 3.1e-47 192.6 178 64.6
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 3.4e-46 189.1 213 60.1
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 1.3e-45 187.2 163 65.0
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 2.2e-45 186.4 137 75.9
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 1.1e-44 184.1 194 58.2
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 2.5e-44 183.0 153 68.0
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 3.2e-44 182.6 141 70.2
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 4.2e-44 182.2 133 72.9
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 7.1e-44 181.4 200 57.0
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 9.3e-44 181.0 140 72.1
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 9.3e-44 181.0 194 58.2
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 1.2e-43 180.6 191 56.5
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.2e-43 180.6 164 65.9
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 1.2e-43 180.6 199 56.3
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 1.6e-43 180.3 137 73.7
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 1.6e-43 180.3 137 73.7
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 2.1e-43 179.9 184 60.3
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 2.1e-43 179.9 194 60.8
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 2.1e-43 179.9 188 61.2
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 2.7e-43 179.5 184 60.3
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 3.5e-43 179.1 166 64.5
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 3.5e-43 179.1 131 75.6
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 3.5e-43 179.1 138 71.7
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 6.1e-43 178.3 174 57.5
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 6.1e-43 178.3 198 57.6
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 6.1e-43 178.3 208 58.7
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 7.9e-43 177.9 153 69.9
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 1.0e-42 177.6 164 63.4
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 1.3e-42 177.2 156 65.4
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.3e-42 177.2 195 57.9
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.8e-42 176.8 134 71.6
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 3.0e-42 176.0 153 69.3
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.0e-42 176.0 144 68.1
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 3.9e-42 175.6 185 58.9
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 3.9e-42 175.6 185 58.9
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 3.9e-42 175.6 185 58.9
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 5.1e-42 175.3 153 68.6
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 6.7e-42 174.9 173 60.7
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.7e-42 174.5 148 67.6
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 8.7e-42 174.5 196 57.1
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 8.7e-42 174.5 134 71.6
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 1.1e-41 174.1 137 70.8
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.1e-41 174.1 154 64.3
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.1e-41 174.1 158 65.2
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.9e-41 173.3 159 64.8
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 2.5e-41 172.9 134 70.1
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 2.5e-41 172.9 191 57.6
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 2.5e-41 172.9 154 64.3
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 2.5e-41 172.9 161 64.0
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 3.3e-41 172.6 151 66.9
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 3.3e-41 172.6 132 69.7
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 5.7e-41 171.8 138 68.8
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 5.7e-41 171.8 135 69.6
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 7.4e-41 171.4 154 62.3
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 7.4e-41 171.4 184 57.1
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 7.4e-41 171.4 160 61.9
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 7.4e-41 171.4 198 56.1
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 7.4e-41 171.4 171 61.4
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 7.4e-41 171.4 208 52.4
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 9.7e-41 171.0 190 55.3
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 9.7e-41 171.0 154 66.9
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 9.7e-41 171.0 170 57.6
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 1.6e-40 170.2 157 62.4
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 2.2e-40 169.9 147 63.9
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 2.8e-40 169.5 190 55.3
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 3.7e-40 169.1 182 55.5
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 3.7e-40 169.1 174 61.5
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.7e-40 169.1 154 63.0
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 8.2e-40 167.9 183 56.3
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.1e-39 167.5 154 62.3
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 1.1e-39 167.5 176 57.4
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.4e-39 166.4 147 62.6
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 3.1e-39 166.0 211 53.1
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 4.1e-39 165.6 193 59.1
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.1e-39 165.6 195 53.8
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 4.1e-39 165.6 143 66.4
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 5.3e-39 165.2 136 69.1
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 5.3e-39 165.2 147 63.9
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 5.3e-39 165.2 129 69.8
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 6.9e-39 164.9 142 66.9
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 9.0e-39 164.5 130 66.9
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 9.0e-39 164.5 154 61.0
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 9.0e-39 164.5 134 68.7
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 1.5e-38 163.7 169 58.0
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.0e-38 163.3 141 65.2
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 4.5e-38 162.2 169 59.8
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 4.5e-38 162.2 173 54.3
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 4.5e-38 162.2 142 64.8
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 5.9e-38 161.8 203 53.2
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 5.9e-38 161.8 131 67.9
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 3.8e-37 159.1 131 64.9
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 6.5e-37 158.3 130 66.2
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 8.5e-37 157.9 133 66.2
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.1e-36 157.5 131 65.6
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.1e-36 157.5 153 59.5
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.4e-36 157.1 150 62.7
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.9e-36 156.8 153 59.5
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 4.2e-36 155.6 193 52.8
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.5e-36 155.2 154 60.4
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 7.2e-36 154.8 200 52.0
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.2e-35 154.1 192 54.7
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.7e-35 152.9 125 63.2
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 3.9e-34 149.1 153 58.2
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 5.7e-33 145.2 170 52.9
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 6.3e-32 141.7 152 57.2
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 2.0e-30 136.7 155 55.5
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.6e-30 136.3 133 60.9
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 5.9e-30 135.2 158 54.4
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 5.9e-30 135.2 158 54.4
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 5.9e-30 135.2 104 70.2
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 7.7e-30 134.8 185 50.3
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 7.7e-30 134.8 131 58.8
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 2.2e-29 133.3 171 50.3
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 2.2e-29 133.3 171 50.3
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 2.2e-29 133.3 171 50.3
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 5.5e-28 128.6 182 50.0
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 5.5e-28 128.6 182 50.0
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-27 127.5 201 47.8
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.6e-27 127.1 109 67.0
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 3.6e-27 125.9 200 47.0
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 4.7e-27 125.6 158 51.9
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 6.1e-27 125.2 201 47.3
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 1.8e-26 123.6 202 46.5
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.8e-26 123.6 150 54.0
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 2.0e-25 120.2 159 52.8
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 3.3e-25 119.4 160 49.4
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 5.7e-25 118.6 133 55.6
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 2.8e-24 116.3 111 62.2
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 8.2e-24 114.8 183 43.2
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.4e-23 113.2 200 48.0
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 9.4e-20 101.3 139 51.8
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.6e-19 100.5 127 52.0
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 1.8e-18 97.1 204 42.6
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 3.0e-18 96.3 203 41.4
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.1e-17 94.4 66 77.3
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 4.0e-10 69.3 157 34.4
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 1.7e-08 63.9 60 63.3
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 4.5e-06 55.8 55 52.7


User provided reference genes

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