Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G225 Amborella trichopoda HOM05D065420 ORTHO05D066901 2.8e-42 174.9 89 100.0
ATR0594G068 Amborella trichopoda HOM05D000139 ORTHO05D000103 3.5e-16 88.2 80 62.5
ATR0693G383 Amborella trichopoda HOM05D065420 ORTHO05D066266 1.4e-09 66.2 40 80.0
Nitab4.5_0005130g0020 Nicotiana tabacum HOM05D000139 ORTHO05D000103 9.2e-09 63.5 93 41.9
CAN.G369.1 Capsicum annuum HOM05D000139 ORTHO05D000103 1.2e-08 63.2 83 43.4
Phvul.008G252200 Phaseolus vulgaris HOM05D000139 ORTHO05D000103 1.2e-08 63.2 74 47.3
CSS0041350 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 2.0e-08 62.4 58 55.2
Nitab4.5_0000719g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 2.0e-08 62.4 79 45.6
Psat2g054720 Pisum sativum HOM05D000139 ORTHO05D000103 2.0e-08 62.4 76 46.1
Lj1P126T10 Lonicera japonica HOM05D000139 ORTHO05D000103 2.7e-08 62.0 97 39.2
QL01p026188 Quercus lobata HOM05D000139 ORTHO05D000103 2.7e-08 62.0 75 44.0
SalBow2G1216 Salvia bowleyana HOM05D000139 ORTHO05D000103 2.7e-08 62.0 76 46.1
MSTRG.12690 Avicennia marina HOM05D000139 ORTHO05D000103 3.5e-08 61.6 77 46.8
ClCG03G000430 Citrullus lanatus HOM05D000139 ORTHO05D000103 4.5e-08 61.2 60 50.0
MELO3C020519.2 Cucumis melo HOM05D000139 ORTHO05D000103 4.5e-08 61.2 60 50.0
CsaV3_1G036490 Cucumis sativus L. HOM05D000139 ORTHO05D000103 4.5e-08 61.2 60 50.0
GSVIVG01024631001 Vitis vinifera HOM05D000139 ORTHO05D000103 4.5e-08 61.2 59 50.8
LjContig00141g0015443 Lotus japonicus HOM05D000139 ORTHO05D000103 5.9e-08 60.8 59 52.5
Nn5g28338 Nelumbo nucifera HOM05D000139 ORTHO05D000103 7.8e-08 60.5 59 50.8
arahy.Tifrunner.gnm1.ann1.9GG7V0 Arachis hypogaea HOM05D000139 ORTHO05D000103 1.0e-07 60.1 75 44.0
arahy.Tifrunner.gnm1.ann1.X9R2CE Arachis hypogaea HOM05D000139 ORTHO05D000103 1.0e-07 60.1 75 44.0
Medtr5g073450 Medicago truncatula HOM05D000139 ORTHO05D000103 1.0e-07 60.1 59 50.8
Peaxi162Scf00055g00142 Petunia axillaris HOM05D000139 ORTHO05D000103 1.0e-07 60.1 59 50.8
Ca_05656_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 1.3e-07 59.7 59 50.8
Sed0018712 Sechium edule HOM05D000139 ORTHO05D000103 1.3e-07 59.7 60 48.3
Dinv28698 Davidia involucrata HOM05D000139 ORTHO05D000103 1.7e-07 59.3 95 37.9
Glyma.02G232100 Glycine max HOM05D000139 ORTHO05D000103 1.7e-07 59.3 73 45.2
Sopen08g019740 Solanum pennellii HOM05D000139 ORTHO05D000103 1.7e-07 59.3 59 50.8
PGSC0003DMG400025456 Solanum tuberosum HOM05D000139 ORTHO05D000103 1.7e-07 59.3 59 50.8
vmacro02914 Vaccinium macrocarpon HOM05D000139 ORTHO05D000103 1.7e-07 59.3 58 50.0
Lalb_Chr04g0251951 Lupinus albus HOM05D000139 ORTHO05D000103 2.3e-07 58.9 59 50.8
Manes.02G217200 Manihot esculenta HOM05D000139 ORTHO05D000103 2.3e-07 58.9 60 50.0
Aqoxy2G00500 Aquilegia oxysepala HOM05D000139 ORTHO05D000103 2.9e-07 58.5 74 43.2
Dinv09675 Davidia involucrata HOM05D000139 ORTHO05D000103 2.9e-07 58.5 59 50.8
Lalb_Chr17g0345401 Lupinus albus HOM05D000139 ORTHO05D000103 2.9e-07 58.5 95 40.0
Prupe.6G048000 Prunus persica HOM05D000139 ORTHO05D000103 2.9e-07 58.5 59 49.2
Solyc08g066070.1 Solanum lycopersicum HOM05D000139 ORTHO05D000103 2.9e-07 58.5 59 50.8
MSTRG.17894 Avicennia marina HOM05D000139 ORTHO05D000103 3.9e-07 58.2 74 44.6
Gohir.A03G025300 Gossypium hirsutum HOM05D000139 ORTHO05D000103 3.9e-07 58.2 59 50.8
Gohir.D03G143200 Gossypium hirsutum HOM05D000139 ORTHO05D000103 3.9e-07 58.2 59 50.8
Gorai.003G150400 Gossypium raimondii HOM05D000139 ORTHO05D000103 3.9e-07 58.2 59 50.8
MD03G1056800 Malus domestica HOM05D000139 ORTHO05D000103 3.9e-07 58.2 76 42.1
RcHm_v2.0_Chr5g0071681 Rosa chinensis HOM05D000139 ORTHO05D000103 3.9e-07 58.2 76 40.8
Ah.08g215080 Amaranthus hybridus HOM05D000139 ORTHO05D000103 5.0e-07 57.8 60 48.3
Eucgr.C02240 Eucalyptus grandis HOM05D000139 ORTHO05D000103 5.0e-07 57.8 76 42.1
Glyma.14G199200 Glycine max HOM05D000139 ORTHO05D000103 5.0e-07 57.8 73 43.8
MBI15_g15937_MAGBIO Magnolia biondii HOM05D000139 ORTHO05D000103 5.0e-07 57.8 59 47.5
PGR119G0232 Punica granatum HOM05D000139 ORTHO05D000103 5.0e-07 57.8 58 48.3
TAR633G2387 Trochodendron aralioides HOM05D000139 ORTHO05D000103 5.0e-07 57.8 58 50.0
EL10Ac7g15924 Beta vulgaris HOM05D000139 ORTHO05D000103 6.6e-07 57.4 88 38.6
Ciclev10028037m.g Citrus clementina HOM05D000139 ORTHO05D000103 6.6e-07 57.4 59 49.2
Dinv11167 Davidia involucrata HOM05D000139 ORTHO05D000103 6.6e-07 57.4 68 39.7
Migut.N00757 Erythranthe guttata HOM05D000139 ORTHO05D000103 6.6e-07 57.4 95 37.9
FvH4_3g39790 Fragaria vesca HOM05D000139 ORTHO05D000103 6.6e-07 57.4 76 40.8
FAN11G2669 Fragaria x ananassa HOM05D000139 ORTHO05D000103 6.6e-07 57.4 76 40.8
FAN16G3339 Fragaria x ananassa HOM05D000139 ORTHO05D000103 6.6e-07 57.4 76 40.8
FAN25G3566 Fragaria x ananassa HOM05D000139 ORTHO05D000103 6.6e-07 57.4 59 47.5
Potri.019G124000 Populus trichocarpa HOM05D000139 ORTHO05D000103 6.6e-07 57.4 59 52.5
CAN.G352.17 Capsicum annuum HOM05D000139 ORTHO05D000103 8.6e-07 57.0 54 48.1
Cpa.g.sc2.351 Carica papaya HOM05D000139 ORTHO05D000103 8.6e-07 57.0 59 47.5
CiPaw.13G068900 Carya illinoinensis HOM05D000139 ORTHO05D000103 8.6e-07 57.0 59 49.2
COL.COLO4_11157 Corchorus olitorius HOM05D000139 ORTHO05D000103 8.6e-07 57.0 59 47.5
DCAR_018216 Daucus carota HOM05D000139 ORTHO05D000103 8.6e-07 57.0 60 48.3
DCAR_018232 Daucus carota HOM05D000139 ORTHO05D000103 8.6e-07 57.0 60 48.3
Oeu019271.1 Olea europaea HOM05D000139 ORTHO05D000103 8.6e-07 57.0 93 35.5
Thecc.09G358100 Theobroma cacao HOM05D000139 ORTHO05D000103 8.6e-07 57.0 59 47.5
PSO349G0061 Papaver somniferum HOM05D000139 ORTHO05D000103 1.1e-06 56.6 59 45.8
PSO765G0115 Papaver somniferum HOM05D000139 ORTHO05D000103 1.1e-06 56.6 59 45.8
Actinidia23194 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.5e-06 56.2 57 50.9
Duzib170G1135 Durio zibethinus HOM05D000139 ORTHO05D000103 1.5e-06 56.2 59 45.8
Eucgr.K02733 Eucalyptus grandis HOM05D000139 ORTHO05D000103 1.5e-06 56.2 76 42.1
SGA_v2.0_scaffold120G32957 Striga asiatica HOM05D000139 ORTHO05D000103 1.5e-06 56.2 92 38.0
SGA_v2.0_scaffold146G36119 Striga asiatica HOM05D000139 ORTHO05D000103 1.5e-06 56.2 59 47.5
Duzib168G1779 Durio zibethinus HOM05D000139 ORTHO05D000103 1.9e-06 55.8 59 45.8
EL10As4g23386 Beta vulgaris HOM05D000139 ORTHO05D000103 2.5e-06 55.5 54 44.4
CANSAT54G2103 Cannabis sativa HOM05D000139 ORTHO05D000103 2.5e-06 55.5 59 45.8
Sabra13G0122900 Salix brachista HOM05D000139 ORTHO05D000103 2.5e-06 55.5 59 49.2
THA.LOC104799384 Tarenaya hassleriana HOM05D000139 ORTHO05D000103 2.5e-06 55.5 59 45.8
MSTRG.18552 Avicennia marina HOM05D000139 ORTHO05D000103 3.3e-06 55.1 59 45.8
AUR62009665 Chenopodium quinoa HOM05D000139 ORTHO05D000103 3.3e-06 55.1 60 46.7
AL8G34620 Arabidopsis lyrata HOM05D000139 ORTHO05D000103 4.3e-06 54.7 59 45.8
BcaB05g22430 Brassica carinata HOM05D000139 ORTHO05D000103 4.3e-06 54.7 59 44.1
Cfa011781 Carpinus fangiana HOM05D000139 ORTHO05D000103 4.3e-06 54.7 76 40.8
Nitab4.5_0004750g0070 Nicotiana tabacum HOM05D000139 ORTHO05D000103 4.3e-06 54.7 80 37.5
Nitab4.5_0005560g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 4.3e-06 54.7 80 37.5
SHI19224 Sapria himalayana HOM05D000139 ORTHO05D000103 4.3e-06 54.7 59 47.5
TWI31G1381 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 4.3e-06 54.7 74 39.2
TWI75G1510 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 4.3e-06 54.7 74 40.5
Ah.15g096020 Amaranthus hybridus HOM05D000139 ORTHO05D000103 5.6e-06 54.3 95 36.8
BcaC03g14096 Brassica carinata HOM05D000139 ORTHO05D000103 5.6e-06 54.3 101 33.7
BolC2t07447H Brassica oleracea HOM05D000139 ORTHO05D000103 5.6e-06 54.3 101 33.7
Mapoly0153s0012 Marchantia polymorpha HOM05D000139 ORTHO05D000103 5.6e-06 54.3 78 39.7
Sc21g0005300 Simmondsia chinensis HOM05D000139 ORTHO05D000103 5.6e-06 54.3 60 45.0
unitig_744.g24468 Utricularia gibba HOM05D000139 ORTHO05D000103 5.6e-06 54.3 57 45.6
AT5G58430 Arabidopsis thaliana HOM05D000139 ORTHO05D000103 7.3e-06 53.9 100 35.0
Peaxi162Scf00089g00063 Petunia axillaris HOM05D000139 ORTHO05D000103 7.3e-06 53.9 52 46.2
TPR.G17762 Trifolium pratense HOM05D000139 ORTHO05D000103 7.3e-06 53.9 49 44.9
Aa31LG11G210 Aethionema arabicum HOM05D000139 ORTHO05D000103 9.5e-06 53.5 59 44.1
Ah.11g045380 Amaranthus hybridus HOM05D000139 ORTHO05D000103 9.5e-06 53.5 54 40.7
AagrBONN_evm.TU.Sc2ySwM_117.3182 Anthoceros agrestis HOM05D000139 ORTHO05D000103 9.5e-06 53.5 57 40.4
Aqoxy3G01522 Aquilegia oxysepala HOM05D000139 ORTHO05D000103 9.5e-06 53.5 75 38.7
BcaB01g04522 Brassica carinata HOM05D000139 ORTHO05D000103 9.5e-06 53.5 74 37.8
BraA02t05845Z Brassica rapa HOM05D000139 ORTHO05D000103 9.5e-06 53.5 104 32.7
Carub.0008s1902 Capsella rubella HOM05D000139 ORTHO05D000103 9.5e-06 53.5 100 34.0
CARHR272260 Cardamine hirsuta HOM05D000139 ORTHO05D000103 9.5e-06 53.5 59 44.1
Haze_24414 Corylus avellana HOM05D000139 ORTHO05D000103 9.5e-06 53.5 76 39.5
Thhalv10012970m.g Eutrema salsugineum HOM05D000139 ORTHO05D000103 9.5e-06 53.5 59 44.1
PSO063G6684 Papaver somniferum HOM05D000139 ORTHO05D000103 9.5e-06 53.5 72 40.3
Sp6g20120 Schrenkiella parvula HOM05D000139 ORTHO05D000103 9.5e-06 53.5 59 44.1
PGSC0003DMG400039752 Solanum tuberosum HOM05D000139 ORTHO05D000103 9.5e-06 53.5 46 50.0


User provided reference genes

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