Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 4.2e-189 664.8 420 100.0
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 1.8e-70 270.8 297 53.9
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 3.7e-68 263.1 291 53.3
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 7.8e-66 255.4 398 53.3
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.5e-64 251.1 311 48.2
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 3.3e-64 250.0 401 46.4
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 4.3e-64 249.6 394 46.7
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 3.6e-63 246.5 397 51.6
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 6.1e-63 245.7 241 56.8
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.3e-62 243.8 395 48.1
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 8.9e-62 241.9 390 50.8
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 2.6e-61 240.4 298 47.3
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 2.6e-61 240.4 391 46.8
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 3.4e-61 240.0 392 49.5
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 3.4e-61 240.0 289 49.8
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 7.5e-61 238.8 292 50.3
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.3e-60 238.0 208 61.5
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.7e-60 237.7 301 46.8
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 2.2e-60 237.3 407 48.6
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.9e-60 236.9 297 49.8
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 8.3e-60 235.3 285 48.8
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 1.1e-59 235.0 293 46.8
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.1e-59 235.0 297 49.5
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.1e-59 235.0 293 50.2
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 1.4e-59 234.6 322 50.6
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.9e-59 234.2 413 44.3
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.4e-59 233.8 297 48.8
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.4e-59 233.8 298 48.7
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 2.4e-59 233.8 406 47.5
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 1.6e-58 231.1 400 47.5
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 4.6e-58 229.6 286 49.7
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 6.0e-58 229.2 291 46.0
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.0e-57 228.4 426 49.5
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.3e-57 228.0 214 58.4
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 5.0e-57 226.1 391 46.5
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 5.0e-57 226.1 354 52.5
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 6.6e-57 225.7 289 49.1
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.5e-56 223.8 298 46.0
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 2.5e-56 223.8 402 44.8
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 3.3e-56 223.4 292 47.6
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 9.5e-56 221.9 372 47.8
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.2e-55 221.5 400 45.8
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.6e-55 221.1 189 60.8
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 2.1e-55 220.7 406 47.8
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 2.1e-55 220.7 290 46.6
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 2.1e-55 220.7 229 54.1
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 2.8e-55 220.3 393 44.5
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 4.7e-55 219.5 297 44.8
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 6.2e-55 219.2 293 46.4
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 1.1e-54 218.4 399 47.4
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 3.1e-54 216.9 245 52.2
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 4.0e-54 216.5 289 48.1
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 8.9e-54 215.3 292 46.2
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 8.9e-54 215.3 206 56.8
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.5e-53 214.5 401 43.9
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 2.0e-53 214.2 213 56.8
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 2.6e-53 213.8 292 47.9
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 4.4e-53 213.0 404 47.0
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 4.4e-53 213.0 414 44.2
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 7.5e-53 212.2 398 44.2
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 7.5e-53 212.2 400 46.2
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 7.5e-53 212.2 290 46.9
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 7.5e-53 212.2 363 54.0
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 2.2e-52 210.7 274 46.0
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 4.9e-52 209.5 286 46.2
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 6.4e-52 209.1 190 60.0
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 2.4e-51 207.2 295 43.4
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 4.1e-51 206.5 293 45.1
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 5.4e-51 206.1 286 44.4
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 5.4e-51 206.1 358 50.8
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 7.0e-51 205.7 227 52.9
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 9.2e-51 205.3 356 40.2
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 1.6e-50 204.5 292 47.3
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.6e-50 204.5 291 46.4
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 1.6e-50 204.5 234 49.6
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.1e-50 204.1 291 46.7
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 3.5e-50 203.4 241 50.2
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 3.5e-50 203.4 293 45.7
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 6.0e-50 202.6 290 46.6
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 2.3e-49 200.7 293 44.4
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 3.0e-49 200.3 234 49.1
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 6.6e-49 199.1 204 54.4
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 1.5e-48 198.0 290 45.2
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.5e-48 197.2 299 42.8
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 2.5e-48 197.2 292 44.9
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 5.6e-48 196.1 293 45.4
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 9.5e-48 195.3 358 49.4
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 2.1e-47 194.1 200 53.0
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 2.8e-47 193.7 202 52.5
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 8.1e-47 192.2 238 48.3
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 1.4e-46 191.4 366 45.9
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.5e-45 188.0 205 49.8
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 5.8e-45 186.0 320 41.6
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.3e-44 184.9 214 50.5
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 4.1e-43 179.9 209 47.8
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 7.1e-43 179.1 203 50.7
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 7.1e-43 179.1 189 52.9
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 9.2e-43 178.7 186 53.2
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.1e-42 177.6 280 42.5
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 4.6e-42 176.4 230 44.3
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 4.6e-42 176.4 250 46.8
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 6.0e-42 176.0 283 42.8
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 1.1e-40 171.8 178 52.8
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 9.5e-40 168.7 184 54.3
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.8e-36 156.8 209 44.5
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 4.9e-36 156.4 207 42.5
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 2.4e-35 154.1 342 42.7
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 8.7e-33 145.6 229 39.3
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 4.0e-30 136.7 240 38.8
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 4.9e-28 129.8 193 43.0
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 3.3e-24 117.1 168 47.0
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 7.9e-18 95.9 136 45.6
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 4.0e-14 83.6 52 76.9
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 5.5e-11 73.2 55 67.3
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 7.4e-08 62.8 243 32.5


User provided reference genes

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