Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 0.0e+00 1356.7 774 100.0
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 4.9e-82 310.1 771 35.3
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 2.1e-80 304.7 762 32.4
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 3.1e-68 264.2 858 28.1
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 7.6e-67 259.6 351 43.3
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 5.1e-63 246.9 830 29.3
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 1.5e-62 245.4 364 40.1
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 4.3e-62 243.8 444 36.9
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 4.8e-61 240.4 366 40.7
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 2.0e-59 235.0 318 43.4
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 3.4e-59 234.2 304 43.8
FvH4_4g03920 Fragaria vesca HOM05D008307 ORTHO05D010374 8.7e-55 219.5 318 40.9
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 4.3e-54 217.2 318 40.3
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 3.1e-52 211.1 756 27.8
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 9.0e-52 209.5 359 37.0
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 1.5e-51 208.8 813 25.5
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 1.5e-51 208.8 777 27.5
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 7.1e-49 199.9 752 27.5
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 2.1e-48 198.4 286 38.1
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 2.1e-48 198.4 300 37.7
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 3.5e-48 197.6 313 38.0
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 6.0e-48 196.8 313 38.3
Migut.N00284 Erythranthe guttata HOM05D008307 ORTHO05D010374 1.3e-47 195.7 304 39.1
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 2.3e-47 194.9 313 37.7
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 3.3e-46 191.0 322 37.0
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 3.7e-45 187.6 362 34.5
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 4.8e-45 187.2 304 37.8
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 8.2e-45 186.4 707 27.2
FAN17G2370 Fragaria x ananassa HOM05D000478 ORTHO05D010374 8.2e-45 186.4 257 42.0
AT3G23370 Arabidopsis thaliana HOM05D008307 ORTHO05D010374 1.1e-44 186.0 305 37.7
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 5.3e-44 183.7 292 38.0
BraA07t28701Z Brassica rapa HOM05D008307 ORTHO05D010374 9.0e-44 183.0 302 36.8
Nitab4.5_0007280g0010 Nicotiana tabacum HOM05D008307 ORTHO05D010374 1.5e-43 182.2 334 35.6
DCAR_027325 Daucus carota HOM05D008307 ORTHO05D010374 3.4e-43 181.0 314 37.3
A07p09070 Brassica napus HOM05D008307 ORTHO05D010374 1.0e-42 179.5 302 36.4
BcaC06g35512 Brassica carinata HOM05D008307 ORTHO05D010374 1.7e-42 178.7 302 35.4
BolC7t41901H Brassica oleracea HOM05D008307 ORTHO05D010374 1.7e-42 178.7 302 35.4
C07p14040 Brassica napus HOM05D008307 ORTHO05D010374 8.4e-42 176.4 302 35.1
PGR031G2080 Punica granatum HOM05D008307 ORTHO05D010374 1.0e-39 169.5 282 40.1
CAN.G220.11 Capsicum annuum HOM05D008307 ORTHO05D010374 6.7e-39 166.8 315 34.0
DCAR_024261 Daucus carota HOM05D008307 ORTHO05D010374 6.9e-36 156.8 312 33.0
COL.COLO4_15896 Corchorus olitorius HOM05D008307 ORTHO05D010374 2.6e-35 154.8 471 29.9
Carub.0003s2363 Capsella rubella HOM05D008307 ORTHO05D010374 1.4e-33 149.1 223 40.8
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 2.5e-33 148.3 200 41.0
FAN12G4262 Fragaria x ananassa HOM05D000478 ORTHO05D010374 9.3e-33 146.4 190 45.3
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 5.7e-30 137.1 290 32.4
SGA_v2.0_scaffold31G12662 Striga asiatica HOM05D008307 ORTHO05D010374 3.7e-29 134.4 447 27.1
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 2.4e-28 131.7 297 30.0
Mapoly0004s0145 Marchantia polymorpha HOM05D008307 ORTHO05D010374 5.3e-28 130.6 355 29.6
AagrBONN_evm.TU.Sc2ySwM_369.432 Anthoceros agrestis HOM05D008307 ORTHO05D010374 1.3e-26 125.9 375 28.5
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 1.9e-25 122.1 363 29.5
Cc03_g05710 Coffea canephora HOM05D008307 ORTHO05D010374 8.8e-23 113.2 138 44.2
Gorai.011G175900 Gossypium raimondii HOM05D008307 ORTHO05D010374 1.7e-21 109.0 300 32.3
Gohir.D10G155880 Gossypium hirsutum HOM05D008307 ORTHO05D010374 1.8e-20 105.5 300 31.7
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 4.5e-19 100.9 473 23.3
Thecc.04G258000 Theobroma cacao HOM05D008307 ORTHO05D010374 2.2e-18 98.6 212 34.9
Cc03_g05700 Coffea canephora HOM05D008307 ORTHO05D010374 8.0e-16 90.1 153 35.3
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 8.8e-15 86.7 170 29.4
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 5.3e-12 77.4 156 31.4
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 7.0e-12 77.0 148 30.4
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 1.6e-11 75.9 146 28.8
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 3.5e-11 74.7 162 29.0
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 2.5e-09 68.6 213 29.1
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 5.5e-09 67.4 197 27.4
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 3.6e-08 64.7 151 27.8
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 4.7e-08 64.3 157 28.0
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 4.7e-08 64.3 145 26.9
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 4.7e-08 64.3 146 27.4
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 4.0e-07 61.2 157 27.4
MBI17_g07069_MAGBIO Magnolia biondii HOM05D006793 ORTHO05D003476 2.6e-06 58.5 65 44.6


User provided reference genes

Program Settings