Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 3.4e-147 526.2 603 100.0
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 8.3e-37 159.5 169 53.3
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 1.6e-35 155.2 155 54.2
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 2.7e-35 154.5 129 58.9
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 1.1e-33 149.1 107 63.6
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 1.1e-33 149.1 124 58.9
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 3.3e-33 147.5 162 48.1
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 3.3e-33 147.5 162 48.1
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 8.1e-32 142.9 108 64.8
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 8.1e-32 142.9 108 64.8
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 1.4e-31 142.1 125 55.2
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 1.4e-31 142.1 125 54.4
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 2.3e-31 141.4 109 59.6
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.1e-31 141.0 108 63.9
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.1e-31 141.0 172 45.3
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 4.0e-31 140.6 125 52.8
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 3.4e-30 137.5 107 59.8
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 9.8e-30 136.0 125 53.6
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 1.3e-29 135.6 125 52.0
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 2.2e-29 134.8 104 62.5
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 2.2e-29 134.8 125 53.6
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 4.9e-29 133.7 99 62.6
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 6.4e-29 133.3 107 57.9
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 1.1e-28 132.5 146 45.2
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 1.1e-28 132.5 92 64.1
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 2.4e-28 131.3 101 60.4
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 3.2e-28 131.0 125 50.4
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 4.1e-28 130.6 146 44.5
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 4.1e-28 130.6 158 42.4
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 9.2e-28 129.4 130 48.5
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 1.2e-27 129.0 99 59.6
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 2.7e-27 127.9 92 60.9
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 2.7e-27 127.9 99 57.6
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 3.5e-27 127.5 148 44.6
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 1.0e-26 125.9 101 56.4
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 1.3e-26 125.6 156 44.2
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 3.0e-26 124.4 126 52.4
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 3.9e-26 124.0 106 52.8
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 3.9e-26 124.0 106 52.8
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 1.9e-25 121.7 120 47.5
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 2.5e-25 121.3 99 54.5
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 3.3e-25 120.9 99 53.5
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 4.3e-25 120.6 103 50.5
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 1.2e-24 119.0 107 51.4
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 1.2e-24 119.0 99 56.6
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 6.2e-24 116.7 106 50.9
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 3.1e-23 114.4 100 56.0
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 4.0e-23 114.0 99 53.5
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 8.9e-23 112.8 133 48.1
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 7.6e-22 109.8 142 44.4
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 7.6e-22 109.8 142 44.4
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 1.3e-21 109.0 142 44.4
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 1.3e-21 109.0 144 43.8
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.7e-21 107.5 142 45.1
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 4.9e-21 107.1 141 41.8
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 1.1e-20 105.9 125 45.6
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.1e-20 105.9 75 65.3
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 3.2e-20 104.4 71 70.4
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 5.4e-20 103.6 71 67.6
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 5.4e-20 103.6 96 56.2
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 7.1e-20 103.2 107 51.4
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 7.1e-20 103.2 94 54.3
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 4.6e-19 100.5 70 64.3
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.0e-18 99.4 71 66.2
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 1.0e-18 99.4 101 44.6
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 1.3e-18 99.0 92 54.3
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 2.3e-18 98.2 125 36.8
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 3.0e-18 97.8 70 62.9
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 3.0e-18 97.8 69 63.8
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 3.9e-18 97.4 121 42.1
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 6.6e-18 96.7 77 58.4
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 1.5e-17 95.5 77 58.4
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 2.5e-17 94.7 70 60.0
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 4.3e-17 94.0 77 58.4
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 4.3e-17 94.0 96 49.0
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 4.3e-17 94.0 168 34.5
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 9.6e-17 92.8 77 53.2
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 2.1e-16 91.7 92 50.0
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 2.1e-16 91.7 113 40.7
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 1.8e-15 88.6 97 47.4
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 2.4e-15 88.2 91 47.3
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 3.1e-15 87.8 129 38.0
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 4.0e-15 87.4 72 59.7
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 4.0e-15 87.4 116 40.5
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 4.4e-14 84.0 93 46.2
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 2.9e-13 81.3 71 52.1
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 3.8e-13 80.9 77 48.1
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 8.4e-13 79.7 66 53.0
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 2.4e-12 78.2 61 59.0
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 9.3e-12 76.3 90 44.4
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 1.2e-11 75.9 69 50.7
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 2.7e-11 74.7 69 49.3
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.7e-10 72.0 135 36.3
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.7e-10 72.0 135 36.3
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.0e-10 71.2 111 40.5
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 3.3e-09 67.8 69 50.7
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 5.6e-09 67.0 107 34.6
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 5.6e-09 67.0 40 75.0
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 3.6e-08 64.3 106 38.7
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 4.8e-08 63.9 73 46.6
RcHm_v2.0_Chr7g0226411 Rosa chinensis HOM05D009519 ORTHO05D010307 1.1e-07 62.8 83 39.8
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 2.4e-07 61.6 119 31.1
Zm00001eb151420 Zea mays HOM05D037632 ORTHO05D009568 1.2e-06 59.3 59 45.8
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 1.5e-06 58.9 103 35.0
AUR62005166 Chenopodium quinoa HOM05D001413 ORTHO05D003288 1.5e-06 58.9 92 30.4
Nn6g31772 Nelumbo nucifera HOM05D007700 ORTHO05D009669 1.5e-06 58.9 139 30.9
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 2.6e-06 58.2 84 42.9
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 3.4e-06 57.8 76 43.4
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 4.5e-06 57.4 38 60.5
Aqoxy3G03617 Aquilegia oxysepala HOM05D005622 ORTHO05D002854 7.6e-06 56.6 120 30.8
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 7.6e-06 56.6 67 40.3
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 7.6e-06 56.6 38 60.5
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 9.9e-06 56.2 38 57.9


User provided reference genes

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