Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G114 Amborella trichopoda HOM05D002537 ORTHO05D002751 1.2e-40 169.5 87 100.0
ATR0582G285 Amborella trichopoda HOM05D002537 ORTHO05D002751 1.2e-24 116.3 70 87.1
Nn4g22137 Nelumbo nucifera HOM05D002537 ORTHO05D002751 3.5e-13 78.2 80 56.2
TAR374G1592 Trochodendron aralioides HOM05D002537 ORTHO05D002751 2.1e-10 68.9 66 57.6
Hund25508 Selenicereus undatus HOM05D002537 ORTHO05D002751 3.6e-10 68.2 64 56.2
TAR475G0008 Trochodendron aralioides HOM05D002537 ORTHO05D002751 4.8e-10 67.8 64 56.2
MBI10_g39274_MAGBIO Magnolia biondii HOM05D002537 ORTHO05D002751 6.2e-10 67.4 84 50.0
TAR622G0948 Trochodendron aralioides HOM05D002537 ORTHO05D002751 4.0e-09 64.7 67 53.7
Glyma.10G298700 Glycine max HOM05D002537 ORTHO05D002751 5.3e-09 64.3 67 53.7
MBI07_g41899_MAGBIO Magnolia biondii HOM05D002537 ORTHO05D002751 5.3e-09 64.3 67 50.7
CiPaw.06G109100 Carya illinoinensis HOM05D002537 ORTHO05D002751 2.0e-08 62.4 72 48.6
Glyma.20G249900 Glycine max HOM05D002537 ORTHO05D002751 2.6e-08 62.0 67 52.2
Lj1g0023956 Lotus japonicus HOM05D002537 ORTHO05D002751 2.6e-08 62.0 73 47.9
Phvul.007G000400 Phaseolus vulgaris HOM05D002537 ORTHO05D002751 4.4e-08 61.2 69 50.7
TWI36G0118 Tripterygium wilfordii HOM05D002537 ORTHO05D002751 4.4e-08 61.2 63 52.4
LjContig00470g0023601 Lotus japonicus HOM05D002537 ORTHO05D002751 5.8e-08 60.8 69 47.8
Psat3g190160 Pisum sativum HOM05D002537 ORTHO05D002751 7.6e-08 60.5 65 50.8
VMungo0720G0377 Vigna mungo HOM05D002537 ORTHO05D002751 7.6e-08 60.5 69 49.3
TPR.G35704 Trifolium pratense HOM05D002537 ORTHO05D002751 9.9e-08 60.1 65 49.2
Medtr7g020870 Medicago truncatula HOM05D002537 ORTHO05D002751 1.7e-07 59.3 69 50.7
QL03p049540 Quercus lobata HOM05D002537 ORTHO05D002751 1.7e-07 59.3 65 49.2
CiPaw.05G101900 Carya illinoinensis HOM05D002537 ORTHO05D002751 2.2e-07 58.9 65 50.8
Cpa.g.sc2461.1 Carica papaya HOM05D002537 ORTHO05D002751 2.9e-07 58.5 64 51.6
Sc11g0000120 Simmondsia chinensis HOM05D002537 ORTHO05D002751 2.9e-07 58.5 64 50.0
TWI18G1224 Tripterygium wilfordii HOM05D002537 ORTHO05D002751 3.8e-07 58.2 64 53.1
Lalb_Chr02g0144711 Lupinus albus HOM05D002537 ORTHO05D002751 4.9e-07 57.8 84 44.0
Manes.09G187700 Manihot esculenta HOM05D002537 ORTHO05D002751 6.4e-07 57.4 82 43.9
Potri.001G066900 Populus trichocarpa HOM05D002537 ORTHO05D002751 8.4e-07 57.0 66 48.5
BolC4t23124H Brassica oleracea HOM05D002537 ORTHO05D002751 1.1e-06 56.6 66 50.0
TWI75G0641 Tripterygium wilfordii HOM05D002537 ORTHO05D002751 1.1e-06 56.6 63 49.2
GSVIVG01001081001 Vitis vinifera HOM05D002537 ORTHO05D002751 1.1e-06 56.6 65 49.2
Glyma.18G281800 Glycine max HOM05D002537 ORTHO05D002751 1.4e-06 56.2 63 52.4
Sabra01G0046500 Salix brachista HOM05D002537 ORTHO05D002751 1.9e-06 55.8 68 47.1
Ca_07076_v3 Cicer arietinum L. HOM05D002537 ORTHO05D002751 2.4e-06 55.5 65 47.7
MELO3C022356.2 Cucumis melo HOM05D002537 ORTHO05D002751 2.4e-06 55.5 65 44.6
CsaV3_6G007760 Cucumis sativus L. HOM05D002537 ORTHO05D002751 2.4e-06 55.5 65 44.6
SEGI_15899 Sequoiadendron giganteum HOM05D002537 ORTHO05D002751 2.4e-06 55.5 66 51.5
Atru.chr6.1911 Acer truncatum HOM05D002537 ORTHO05D002751 4.2e-06 54.7 73 43.8
Aqoxy1G00445 Aquilegia oxysepala HOM05D002537 ORTHO05D002751 4.2e-06 54.7 64 48.4
C04p15530 Brassica napus HOM05D002537 ORTHO05D002751 4.2e-06 54.7 67 52.2
ClCG06G001740 Citrullus lanatus HOM05D002537 ORTHO05D002751 4.2e-06 54.7 79 39.2
Hma1.2p1_0787F.1_g217860 Hydrangea macrophylla HOM05D002537 ORTHO05D002751 4.2e-06 54.7 65 47.7
Rhsim12G0017600 Rhododendron simsii HOM05D002537 ORTHO05D002751 4.2e-06 54.7 74 44.6
Duzib132G0792 Durio zibethinus HOM05D002537 ORTHO05D002751 5.4e-06 54.3 65 49.2
Dinv19305 Davidia involucrata HOM05D002537 ORTHO05D002751 9.3e-06 53.5 81 42.0
Duzib052G0845 Durio zibethinus HOM05D002537 ORTHO05D002751 9.3e-06 53.5 64 50.0
Glyma.08G257500 Glycine max HOM05D002537 ORTHO05D002751 9.3e-06 53.5 66 48.5
Potri.003G163000 Populus trichocarpa HOM05D002537 ORTHO05D002751 9.3e-06 53.5 67 47.8
PGR119G1955 Punica granatum HOM05D002537 ORTHO05D002751 9.3e-06 53.5 67 49.3


User provided reference genes

Program Settings