Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 0.0e+00 1152.9 575 100.0
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 1.6e-186 656.8 586 57.8
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 1.4e-179 633.6 588 54.9
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 1.2e-178 630.6 589 54.5
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 1.3e-177 627.1 585 54.0
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 3.0e-177 625.9 583 55.2
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 3.3e-176 622.5 592 52.7
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 4.3e-176 622.1 577 54.8
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 4.3e-176 622.1 583 54.9
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 5.6e-176 621.7 581 54.0
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 1.6e-175 620.2 580 54.3
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 2.1e-175 619.8 580 54.3
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 2.1e-175 619.8 585 53.3
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 4.8e-175 618.6 587 52.8
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 1.4e-174 617.1 587 52.8
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 3.1e-174 615.9 582 53.3
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 6.9e-174 614.8 580 53.6
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 1.2e-173 614.0 587 52.1
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 7.6e-173 611.3 587 53.5
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 1.7e-172 610.1 586 52.7
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 3.2e-171 605.9 588 53.1
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 4.2e-171 605.5 584 53.3
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 2.1e-170 603.2 584 53.3
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 3.5e-170 602.4 588 52.6
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 2.3e-169 599.7 605 50.6
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 3.0e-169 599.4 585 52.0
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 3.0e-169 599.4 590 52.2
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 6.7e-169 598.2 588 51.9
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 1.9e-168 596.7 584 51.0
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 2.5e-168 596.3 589 52.8
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 5.7e-168 595.1 580 51.6
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 9.6e-168 594.3 587 51.3
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 5.3e-166 588.6 587 52.6
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 5.3e-166 588.6 588 50.2
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.2e-165 587.4 584 52.1
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 2.0e-165 586.6 588 50.9
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 2.6e-165 586.3 594 51.2
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 1.0e-164 584.3 622 49.2
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.8e-164 582.4 591 50.8
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 5.0e-164 582.0 578 51.7
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 6.5e-164 581.6 591 50.9
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 1.1e-163 580.9 559 55.3
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.1e-163 580.9 580 50.5
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 5.5e-163 578.6 583 51.5
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 4.6e-162 575.5 584 49.8
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 6.1e-162 575.1 582 49.7
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 1.8e-161 573.5 584 50.3
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 1.1e-160 570.9 543 54.0
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 1.5e-160 570.5 584 50.2
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 3.3e-160 569.3 580 50.0
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 9.7e-160 567.8 580 50.0
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 2.2e-159 566.6 589 49.6
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 2.2e-159 566.6 578 50.5
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 2.8e-159 566.2 588 50.3
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 6.3e-159 565.1 589 49.4
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 1.8e-158 563.5 585 48.7
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 4.1e-158 562.4 586 49.3
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 5.3e-158 562.0 585 48.5
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 2.0e-157 560.1 577 50.3
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 5.9e-157 558.5 583 49.1
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.7e-156 557.0 638 46.9
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 3.8e-156 555.8 570 49.5
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 1.1e-155 554.3 545 52.7
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 9.4e-155 551.2 565 50.8
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 4.6e-154 548.9 575 49.4
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.0e-153 547.7 584 50.9
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 3.9e-153 545.8 545 51.0
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 8.8e-153 544.7 538 51.9
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 2.0e-152 543.5 484 54.8
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 3.7e-151 539.3 477 54.9
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 3.7e-151 539.3 479 56.4
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 4.1e-150 535.8 599 48.2
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 5.3e-150 535.4 540 50.2
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 1.7e-148 530.4 560 48.6
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 7.2e-147 525.0 540 50.4
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 4.4e-144 515.8 584 48.1
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 4.4e-144 515.8 541 50.6
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 1.4e-142 510.8 594 47.6
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 2.0e-141 506.9 545 49.5
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 3.5e-141 506.1 523 49.7
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 6.5e-132 475.3 609 44.3
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 3.0e-129 466.5 623 44.1
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 2.0e-125 453.8 582 43.6
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.5e-120 437.6 502 48.4
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 1.6e-114 417.5 512 46.1
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 3.0e-113 413.3 280 65.7
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 6.8e-113 412.1 604 38.1
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 1.1e-110 404.8 601 37.8
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 3.2e-110 403.3 552 42.8
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 5.9e-109 399.1 547 42.8
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 4.3e-107 392.9 702 35.8
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 1.2e-106 391.3 306 57.8
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 1.5e-96 357.8 418 44.5
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 5.8e-96 355.9 500 42.2
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 4.3e-83 313.2 243 58.0
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 3.5e-77 293.5 245 55.5
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 3.9e-76 290.0 329 47.4
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 6.0e-69 266.2 341 43.1
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 1.3e-68 265.0 366 42.9
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 1.9e-67 261.2 329 44.7
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 1.1e-65 255.4 210 57.6
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 4.3e-59 233.4 481 33.9
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 6.2e-58 229.6 423 34.5
Oeu015049.1 Olea europaea HOM05D006190 ORTHO05D008260 1.1e-57 228.8 156 69.9
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 1.9e-54 218.0 194 53.1
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 3.0e-44 184.1 282 41.8
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 5.1e-44 183.3 287 39.7
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 2.5e-43 181.0 283 39.6
Sabra14G0120600 Salix brachista HOM05D006190 ORTHO05D008260 3.8e-39 167.2 170 47.1
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 2.5e-38 164.5 186 46.2
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.8e-33 148.3 277 37.2
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 2.4e-33 147.9 170 50.6
QL08p030629 Quercus lobata HOM05D006190 ORTHO05D027094 1.0e-28 132.5 88 67.0
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 1.2e-24 119.0 164 40.2
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 2.0e-24 118.2 224 36.2
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 7.7e-24 116.3 91 59.3
THA.LOC104822845 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.9e-22 111.7 136 43.4
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 7.5e-19 99.8 150 44.0
Hund15364 Selenicereus undatus HOM05D006190 ORTHO05D027094 1.0e-15 89.4 67 58.2
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.8e-15 87.4 166 34.3
Lsat_1_v5_gn_1_125520 Lactuca sativa HOM05D006190 ORTHO05D008260 2.7e-08 64.7 60 53.3
BcaC02g11231 Brassica carinata HOM05D006190 ORTHO05D027094 1.0e-07 62.8 54 53.7
CDE04G2645 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 3.8e-07 60.8 132 31.1
BcaC01g05961 Brassica carinata HOM05D006190 ORTHO05D008260 1.9e-06 58.5 81 38.3


User provided reference genes

Program Settings