Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G097 Amborella trichopoda HOM05D007536 ORTHO05D009390 2.5e-39 167.5 81 100.0
PSO210G0145 Papaver somniferum HOM05D007536 ORTHO05D009390 1.1e-15 89.0 58 63.8
MBI07_g16910_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 8.1e-14 82.8 78 51.3
MBI10_g13809_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 8.1e-14 82.8 56 66.1
Aqoxy5G00211 Aquilegia oxysepala HOM05D007536 ORTHO05D009390 1.1e-13 82.4 73 56.2
QL03p030462 Quercus lobata HOM05D007536 ORTHO05D009390 3.1e-13 80.9 58 58.6
CDE04G1469 Ceratophyllum demersum HOM05D007536 ORTHO05D009390 1.5e-12 78.6 79 53.2
Sc20g0000630 Simmondsia chinensis HOM05D007536 ORTHO05D009390 3.4e-12 77.4 57 59.6
CiPaw.15G107000 Carya illinoinensis HOM05D007536 ORTHO05D009390 5.8e-12 76.6 67 52.2
Ciclev10019470m.g Citrus clementina HOM05D007536 ORTHO05D009390 5.8e-12 76.6 62 54.8
Lj2C43T1 Lonicera japonica HOM05D007536 ORTHO05D009390 9.9e-12 75.9 66 51.5
Dinv24676 Davidia involucrata HOM05D007536 ORTHO05D009390 1.3e-11 75.5 56 57.1
Sed0002849 Sechium edule HOM05D007536 ORTHO05D009390 2.2e-11 74.7 60 50.0
Cpa.g.sc162.41 Carica papaya HOM05D007536 ORTHO05D009390 3.7e-11 73.9 57 57.9
Dinv18987 Davidia involucrata HOM05D007536 ORTHO05D009390 4.9e-11 73.6 55 58.2
Sed0012628 Sechium edule HOM05D007536 ORTHO05D009390 6.4e-11 73.2 70 45.7
Atru.chr2.985 Acer truncatum HOM05D007536 ORTHO05D009390 1.4e-10 72.0 64 51.6
Nitab4.5_0003780g0060 Nicotiana tabacum HOM05D007536 ORTHO05D009390 1.4e-10 72.0 55 54.5
Nitab4.5_0006737g0040 Nicotiana tabacum HOM05D007536 ORTHO05D009390 1.4e-10 72.0 55 54.5
Sopen04g005180 Solanum pennellii HOM05D007536 ORTHO05D009390 1.4e-10 72.0 55 56.4
MSTRG.10543 Avicennia marina HOM05D007536 ORTHO05D009390 1.9e-10 71.6 62 50.0
ClCG03G009740 Citrullus lanatus HOM05D007536 ORTHO05D009390 1.9e-10 71.6 60 48.3
Haze_04425 Corylus avellana HOM05D007536 ORTHO05D009390 1.9e-10 71.6 67 49.3
SalBow1G3025 Salvia bowleyana HOM05D007536 ORTHO05D009390 1.9e-10 71.6 59 52.5
Solyc04g010050.4 Solanum lycopersicum HOM05D007536 ORTHO05D009390 1.9e-10 71.6 55 54.5
MELO3C010129.2 Cucumis melo HOM05D007536 ORTHO05D009390 2.4e-10 71.2 60 48.3
Migut.L01514 Erythranthe guttata HOM05D007536 ORTHO05D009390 3.2e-10 70.9 65 47.7
Nn1g02810 Nelumbo nucifera HOM05D007536 ORTHO05D009390 3.2e-10 70.9 56 57.1
Actinidia34755 Actinidia chinensis HOM05D007536 ORTHO05D009390 4.1e-10 70.5 61 50.8
Oeu000315.1 Olea europaea HOM05D007536 ORTHO05D009390 4.1e-10 70.5 59 49.2
Thecc.05G270900 Theobroma cacao HOM05D007536 ORTHO05D009390 4.1e-10 70.5 67 50.7
AUR62040928 Chenopodium quinoa HOM05D007536 ORTHO05D009390 5.4e-10 70.1 59 55.9
CSS0008501 Camellia sinensis var. sinensis HOM05D007536 ORTHO05D009390 7.1e-10 69.7 57 56.1
AUR62004838 Chenopodium quinoa HOM05D007536 ORTHO05D009390 7.1e-10 69.7 56 57.1
Cc02_g08820 Coffea canephora HOM05D007536 ORTHO05D009390 7.1e-10 69.7 55 54.5
Ah.04g163100 Amaranthus hybridus HOM05D007536 ORTHO05D009390 9.2e-10 69.3 55 56.4
Hma1.2p1_2103F.1_g314080 Hydrangea macrophylla HOM05D007536 ORTHO05D009390 1.2e-09 68.9 56 51.8
Peaxi162Scf00528g00022 Petunia axillaris HOM05D007536 ORTHO05D009390 1.6e-09 68.6 55 52.7
TAR636G1433 Trochodendron aralioides HOM05D007536 ORTHO05D009390 1.6e-09 68.6 69 47.8
BraA09t41926Z Brassica rapa HOM05D007536 ORTHO05D009390 2.1e-09 68.2 69 43.5
Aa31LG11G11200 Aethionema arabicum HOM05D007536 ORTHO05D009390 3.5e-09 67.4 57 47.4
BcaC07g41933 Brassica carinata HOM05D007536 ORTHO05D009390 4.6e-09 67.0 63 47.6
BolC8t52519H Brassica oleracea HOM05D007536 ORTHO05D009390 4.6e-09 67.0 63 47.6
vmacro10366 Vaccinium macrocarpon HOM05D007536 ORTHO05D009390 6.0e-09 66.6 57 49.1
C08p49910 Brassica napus HOM05D007536 ORTHO05D009390 7.8e-09 66.2 57 47.4
CARHR008520 Cardamine hirsuta HOM05D007536 ORTHO05D009390 7.8e-09 66.2 57 45.6
A09p65820 Brassica napus HOM05D007536 ORTHO05D009390 1.0e-08 65.9 69 42.0
COL.COLO4_15481 Corchorus olitorius HOM05D007536 ORTHO05D009390 1.0e-08 65.9 77 42.9
Prupe.6G350100 Prunus persica HOM05D007536 ORTHO05D009390 1.0e-08 65.9 56 51.8
CsaV3_1G045080 Cucumis sativus L. HOM05D007536 ORTHO05D009390 1.3e-08 65.5 59 45.8
RcHm_v2.0_Chr3g0449641 Rosa chinensis HOM05D007536 ORTHO05D009390 1.3e-08 65.5 56 50.0
TAR362G0895 Trochodendron aralioides HOM05D007536 ORTHO05D009390 1.3e-08 65.5 69 44.9
CAN.G358.142 Capsicum annuum HOM05D007536 ORTHO05D009390 1.7e-08 65.1 55 49.1
PGR142G0030 Punica granatum HOM05D007536 ORTHO05D009390 1.7e-08 65.1 57 52.6
GSVIVG01023504001 Vitis vinifera HOM05D007536 ORTHO05D009390 1.7e-08 65.1 62 50.0
THA.LOC104821264 Tarenaya hassleriana HOM05D007536 ORTHO05D009390 2.3e-08 64.7 59 47.5
Gohir.D11G257700 Gossypium hirsutum HOM05D007536 ORTHO05D009390 3.0e-08 64.3 56 48.2
Gorai.007G276000 Gossypium raimondii HOM05D007536 ORTHO05D009390 3.0e-08 64.3 56 48.2
Manes.08G053700 Manihot esculenta HOM05D007536 ORTHO05D009390 3.9e-08 63.9 69 46.4
Sp1g07270 Schrenkiella parvula HOM05D007536 ORTHO05D009390 3.9e-08 63.9 57 43.9
Carub.0001s0797 Capsella rubella HOM05D007536 ORTHO05D009390 5.1e-08 63.5 57 43.9
COL.COLO4_15479 Corchorus olitorius HOM05D007536 ORTHO05D009390 5.1e-08 63.5 77 42.9
CANSAT54G0748 Cannabis sativa HOM05D007536 ORTHO05D009390 6.6e-08 63.2 62 45.2
Gohir.D13G172800 Gossypium hirsutum HOM05D007536 ORTHO05D009390 6.6e-08 63.2 55 50.9
Gorai.013G187800 Gossypium raimondii HOM05D007536 ORTHO05D009390 6.6e-08 63.2 55 50.9
TWI38G0843 Tripterygium wilfordii HOM05D007536 ORTHO05D009390 6.6e-08 63.2 56 50.0
AL1G19040 Arabidopsis lyrata HOM05D007536 ORTHO05D009390 8.6e-08 62.8 57 42.1
AT1G08610 Arabidopsis thaliana HOM05D007536 ORTHO05D009390 8.6e-08 62.8 57 42.1
Gohir.A13G167300 Gossypium hirsutum HOM05D007536 ORTHO05D009390 8.6e-08 62.8 55 50.9
MD04G1230200 Malus domestica HOM05D007536 ORTHO05D009390 8.6e-08 62.8 56 48.2
FvH4_6g01910 Fragaria vesca HOM05D007536 ORTHO05D009390 1.1e-07 62.4 56 50.0
FAN05G1587 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.1e-07 62.4 56 50.0
FAN05G2252 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.1e-07 62.4 56 50.0
FAN14G0137 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.1e-07 62.4 56 50.0
FAN14G3895 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.1e-07 62.4 56 50.0
Ca_10014_v3 Cicer arietinum L. HOM05D007536 ORTHO05D009390 1.5e-07 62.0 56 50.0
Eucgr.B02149 Eucalyptus grandis HOM05D007536 ORTHO05D009390 1.5e-07 62.0 57 47.4
Gohir.A11G247400 Gossypium hirsutum HOM05D007536 ORTHO05D009390 1.5e-07 62.0 56 46.4
Lj5g0027095 Lotus japonicus HOM05D007536 ORTHO05D009390 1.5e-07 62.0 54 55.6
Medtr1g080120 Medicago truncatula HOM05D007536 ORTHO05D009390 1.9e-07 61.6 57 47.4
VMungo0720G1101 Vigna mungo HOM05D007536 ORTHO05D009390 1.9e-07 61.6 62 48.4
ECA233G3269 Erigeron canadensis HOM05D007536 ORTHO05D009390 2.5e-07 61.2 51 49.0
Thhalv10007213m.g Eutrema salsugineum HOM05D007536 ORTHO05D009390 2.5e-07 61.2 57 42.1
FAN09G4642 Fragaria x ananassa HOM05D007536 ORTHO05D009390 2.5e-07 61.2 56 50.0
Phvul.008G151830 Phaseolus vulgaris HOM05D007536 ORTHO05D009390 3.3e-07 60.8 69 44.9
Rhsim09G0137000 Rhododendron simsii HOM05D007536 ORTHO05D009390 3.3e-07 60.8 51 51.0
HanXRQChr07g0204491 Helianthus annuus HOM05D007536 ORTHO05D009390 4.3e-07 60.5 69 43.5
Lsat_1_v5_gn_8_24901 Lactuca sativa HOM05D007536 ORTHO05D009390 5.6e-07 60.1 50 50.0
Glyma.20G222900 Glycine max HOM05D007536 ORTHO05D009390 9.6e-07 59.3 56 46.4
FAN02G3965 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.6e-06 58.5 56 48.2
Duzib177G0261 Durio zibethinus HOM05D007536 ORTHO05D009390 2.1e-06 58.2 58 46.6
Sabra19G0031900 Salix brachista HOM05D007536 ORTHO05D009390 2.1e-06 58.2 55 45.5
Potri.019G019200 Populus trichocarpa HOM05D007536 ORTHO05D009390 2.8e-06 57.8 55 43.6
Lalb_Chr21g0311181 Lupinus albus HOM05D007536 ORTHO05D009390 3.6e-06 57.4 56 44.6
Lalb_Chr02g0149121 Lupinus albus HOM05D007536 ORTHO05D009390 4.7e-06 57.0 56 44.6
TPR.G22324 Trifolium pratense HOM05D007536 ORTHO05D009390 6.2e-06 56.6 53 47.2
Psat6g142640 Pisum sativum HOM05D007536 ORTHO05D009390 8.1e-06 56.2 53 47.2


User provided reference genes

Program Settings