Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G088 Amborella trichopoda HOM05D002563 ORTHO05D006856 2.0e-29 131.7 65 100.0
ATR0743G194 Amborella trichopoda HOM05D002563 ORTHO05D006856 1.4e-19 99.0 64 78.1
ATR0582G047 Amborella trichopoda HOM05D002563 ORTHO05D006856 1.9e-19 98.6 64 78.1
Thhalv10007840m.g Eutrema salsugineum HOM05D002563 ORTHO05D006856 9.0e-14 79.7 54 63.0
Aa31LG7G3150 Aethionema arabicum HOM05D002563 ORTHO05D006856 1.2e-13 79.3 54 63.0
THA.LOC104812127 Tarenaya hassleriana HOM05D002563 ORTHO05D006856 2.0e-13 78.6 54 59.3
AT1G18480 Arabidopsis thaliana HOM05D002563 ORTHO05D006856 3.4e-13 77.8 54 61.1
CARHR019100 Cardamine hirsuta HOM05D002563 ORTHO05D006856 3.4e-13 77.8 54 61.1
AL1G30910 Arabidopsis lyrata HOM05D002563 ORTHO05D006856 4.5e-13 77.4 54 61.1
PGR142G0923 Punica granatum HOM05D002563 ORTHO05D006856 4.5e-13 77.4 57 59.6
Sp1g16420 Schrenkiella parvula HOM05D002563 ORTHO05D006856 4.5e-13 77.4 54 59.3
SHI26106 Sapria himalayana HOM05D002563 ORTHO05D006856 5.9e-13 77.0 54 59.3
BcaB03g12983 Brassica carinata HOM05D002563 ORTHO05D006856 1.0e-12 76.3 54 57.4
Carub.0005s1262 Capsella rubella HOM05D002563 ORTHO05D006856 1.3e-12 75.9 54 57.4
Lj6C207T2 Lonicera japonica HOM05D002563 ORTHO05D006856 1.3e-12 75.9 54 59.3
Lj6C216T6 Lonicera japonica HOM05D002563 ORTHO05D006856 1.3e-12 75.9 54 59.3
SEGI_01120 Sequoiadendron giganteum HOM05D002563 ORTHO05D006856 1.7e-12 75.5 64 53.1
Atru.chr2.1563 Acer truncatum HOM05D002563 ORTHO05D006856 2.2e-12 75.1 64 50.0
Dinv33212 Davidia involucrata HOM05D002563 ORTHO05D006856 2.2e-12 75.1 54 57.4
Gohir.D09G212200 Gossypium hirsutum HOM05D002563 ORTHO05D006856 2.9e-12 74.7 54 61.1
Gorai.006G232000 Gossypium raimondii HOM05D002563 ORTHO05D006856 2.9e-12 74.7 54 61.1
SEGI_18926 Sequoiadendron giganteum HOM05D002563 ORTHO05D006856 2.9e-12 74.7 57 57.9
BcaC07g38912 Brassica carinata HOM05D002563 ORTHO05D006856 3.8e-12 74.3 54 53.7
C08p18660 Brassica napus HOM05D002563 ORTHO05D006856 3.8e-12 74.3 54 53.7
BolC8t49492H Brassica oleracea HOM05D002563 ORTHO05D006856 3.8e-12 74.3 54 53.7
BraA08t34971Z Brassica rapa HOM05D002563 ORTHO05D006856 5.0e-12 73.9 54 53.7
Thecc.04G164500 Theobroma cacao HOM05D002563 ORTHO05D006856 5.0e-12 73.9 54 59.3
Cpa.g.sc9.374 Carica papaya HOM05D002563 ORTHO05D006856 6.5e-12 73.6 54 55.6
CiPaw.01G168700 Carya illinoinensis HOM05D002563 ORTHO05D006856 6.5e-12 73.6 64 50.0
Duzib212G0374 Durio zibethinus HOM05D002563 ORTHO05D006856 6.5e-12 73.6 54 59.3
Solyc08g014290.1 Solanum lycopersicum HOM05D002563 ORTHO05D006856 6.5e-12 73.6 54 57.4
Sopen08g005200 Solanum pennellii HOM05D002563 ORTHO05D006856 6.5e-12 73.6 54 57.4
Gohir.A09G213606 Gossypium hirsutum HOM05D002563 ORTHO05D006856 8.4e-12 73.2 54 59.3
Pp3c17_14050 Physcomitrium patens HOM05D002563 ORTHO05D006856 8.4e-12 73.2 64 50.0
TWI63G0091 Tripterygium wilfordii HOM05D002563 ORTHO05D006856 8.4e-12 73.2 54 59.3
CAN.G759.4 Capsicum annuum HOM05D002563 ORTHO05D006856 1.1e-11 72.8 64 50.0
Dinv18326 Davidia involucrata HOM05D002563 ORTHO05D006856 1.1e-11 72.8 54 55.6
COL.COLO4_38112 Corchorus olitorius HOM05D002563 ORTHO05D006856 1.4e-11 72.4 54 57.4
Nitab4.5_0000013g0500 Nicotiana tabacum HOM05D002563 ORTHO05D006856 1.4e-11 72.4 54 55.6
Nitab4.5_0003911g0010 Nicotiana tabacum HOM05D002563 ORTHO05D006856 1.4e-11 72.4 54 55.6
Peaxi162Scf00075g00133 Petunia axillaris HOM05D002563 ORTHO05D006856 1.4e-11 72.4 54 57.4
Cpa.g.sc9.376 Carica papaya HOM05D002563 ORTHO05D006856 1.9e-11 72.0 54 53.7
GSVIVG01035133001 Vitis vinifera HOM05D002563 ORTHO05D006856 1.9e-11 72.0 54 55.6
BcaB07g31856 Brassica carinata HOM05D002563 ORTHO05D006856 2.5e-11 71.6 54 51.9
A06p14520 Brassica napus HOM05D000001 ORTHO05D000003 2.5e-11 71.6 54 51.9
A08p30380 Brassica napus HOM05D002563 ORTHO05D006856 2.5e-11 71.6 54 51.9
BraA06t24577Z Brassica rapa HOM05D002563 ORTHO05D006856 2.5e-11 71.6 54 51.9
MELO3C011856.2 Cucumis melo HOM05D002563 ORTHO05D006856 2.5e-11 71.6 54 53.7
CsaV3_5G030180 Cucumis sativus L. HOM05D002563 ORTHO05D006856 2.5e-11 71.6 54 53.7
Rhsim09G0008800 Rhododendron simsii HOM05D002563 ORTHO05D006856 2.5e-11 71.6 54 55.6
C05p16740 Brassica napus HOM05D002563 ORTHO05D006856 3.2e-11 71.2 57 47.4
AUR62006064 Chenopodium quinoa HOM05D002563 ORTHO05D006856 3.2e-11 71.2 55 52.7
Ciclev10020495m.g Citrus clementina HOM05D002563 ORTHO05D006856 3.2e-11 71.2 54 55.6
Lsat_1_v5_gn_6_67620 Lactuca sativa HOM05D002563 ORTHO05D006856 4.2e-11 70.9 64 48.4
Nn2g13968 Nelumbo nucifera HOM05D002563 ORTHO05D006856 4.2e-11 70.9 54 53.7
TWI63G0944 Tripterygium wilfordii HOM05D002563 ORTHO05D006856 4.2e-11 70.9 54 55.6
Ah.07g205320 Amaranthus hybridus HOM05D002563 ORTHO05D006856 5.5e-11 70.5 55 54.5
arahy.Tifrunner.gnm1.ann1.SY3PZC Arachis hypogaea HOM05D002563 ORTHO05D006856 5.5e-11 70.5 54 53.7
ClCG11G013560 Citrullus lanatus HOM05D002563 ORTHO05D006856 5.5e-11 70.5 54 51.9
Sed0011720 Sechium edule HOM05D002563 ORTHO05D006856 5.5e-11 70.5 54 51.9
arahy.Tifrunner.gnm1.ann1.W46PLF Arachis hypogaea HOM05D002563 ORTHO05D006856 7.2e-11 70.1 54 51.9
BcaC05g25741 Brassica carinata HOM05D002563 ORTHO05D006856 7.2e-11 70.1 54 50.0
BolC5t30374H Brassica oleracea HOM05D000001 ORTHO05D000003 7.2e-11 70.1 54 50.0
CANSAT56G0069 Cannabis sativa HOM05D002563 ORTHO05D006856 7.2e-11 70.1 54 51.9
DCAR_027518 Daucus carota HOM05D002563 ORTHO05D006856 7.2e-11 70.1 57 50.9
Phvul.005G085100 Phaseolus vulgaris HOM05D002563 ORTHO05D006856 7.2e-11 70.1 54 53.7
Actinidia12129 Actinidia chinensis HOM05D002563 ORTHO05D006856 9.3e-11 69.7 55 50.9
Cfa015672 Carpinus fangiana HOM05D002563 ORTHO05D006856 9.3e-11 69.7 54 50.0
AUR62035563 Chenopodium quinoa HOM05D002563 ORTHO05D006856 9.3e-11 69.7 55 50.9
Manes.05G137100 Manihot esculenta HOM05D002563 ORTHO05D006856 9.3e-11 69.7 54 53.7
TAR633G0323 Trochodendron aralioides HOM05D002563 ORTHO05D006856 9.3e-11 69.7 54 51.9
MSTRG.18642 Avicennia marina HOM05D002563 ORTHO05D006856 1.2e-10 69.3 54 53.7
EL10Ac3g05246 Beta vulgaris HOM05D002563 ORTHO05D006856 1.2e-10 69.3 55 50.9
CSS0022138 Camellia sinensis var. sinensis HOM05D002563 ORTHO05D006856 1.2e-10 69.3 64 45.3
CSS0039717 Camellia sinensis var. sinensis HOM05D002563 ORTHO05D006856 1.2e-10 69.3 64 45.3
CSS0049843 Camellia sinensis var. sinensis HOM05D002563 ORTHO05D006856 1.2e-10 69.3 64 45.3
QL10p056525 Quercus lobata HOM05D002563 ORTHO05D006856 1.6e-10 68.9 64 42.2
RcHm_v2.0_Chr4g0435781 Rosa chinensis HOM05D002563 ORTHO05D006856 1.6e-10 68.9 64 40.6
vmacro00689 Vaccinium macrocarpon HOM05D002563 ORTHO05D006856 1.6e-10 68.9 54 51.9
HanXRQChr10g0285981 Helianthus annuus HOM05D002563 ORTHO05D006856 2.1e-10 68.6 54 53.7
Oeu050332.1 Olea europaea HOM05D002563 ORTHO05D006856 2.1e-10 68.6 57 50.9
Sc19g0002250 Simmondsia chinensis HOM05D002563 ORTHO05D006856 2.1e-10 68.6 54 50.0
Hma1.2p1_0725F.1_g208840 Hydrangea macrophylla HOM05D002563 ORTHO05D006856 2.7e-10 68.2 54 50.0
Lalb_Chr10g0093701 Lupinus albus HOM05D002563 ORTHO05D006856 2.7e-10 68.2 51 54.9
MD07G1034500 Malus domestica HOM05D002563 ORTHO05D006856 2.7e-10 68.2 58 44.8
Mapoly0109s0024 Marchantia polymorpha HOM05D002563 ORTHO05D006856 2.7e-10 68.2 64 46.9
PSO210G6884 Papaver somniferum HOM05D002563 ORTHO05D006856 2.7e-10 68.2 64 45.3
SMO358G0530 Selaginella moellendorffii HOM05D002563 ORTHO05D006856 2.7e-10 68.2 58 51.7
TWI15G0988 Tripterygium wilfordii HOM05D002563 ORTHO05D006856 2.7e-10 68.2 50 58.0
unitig_899.g15349 Utricularia gibba HOM05D002563 ORTHO05D006856 2.7e-10 68.2 64 45.3
VMungo1080G0795 Vigna mungo HOM05D002563 ORTHO05D006856 3.5e-10 67.8 54 50.0
Haze_00849 Corylus avellana HOM05D002563 ORTHO05D006856 4.6e-10 67.4 54 48.1
FAN21G2308 Fragaria x ananassa HOM05D002563 ORTHO05D006856 4.6e-10 67.4 54 50.0
Lsat_1_v5_gn_2_40101 Lactuca sativa HOM05D002563 ORTHO05D006856 4.6e-10 67.4 54 51.9
MD02G1292100 Malus domestica HOM05D002563 ORTHO05D006856 4.6e-10 67.4 58 43.1
MBI07_g11490_MAGBIO Magnolia biondii HOM05D002563 ORTHO05D006856 6.1e-10 67.0 57 49.1
FvH4_3g25460 Fragaria vesca HOM05D002563 ORTHO05D006856 1.0e-09 66.2 54 48.1
FAN11G2708 Fragaria x ananassa HOM05D002563 ORTHO05D006856 1.0e-09 66.2 54 48.1
FAN25G2288 Fragaria x ananassa HOM05D002563 ORTHO05D006856 1.0e-09 66.2 54 48.1
Glyma.19G062400 Glycine max HOM05D002563 ORTHO05D006856 1.0e-09 66.2 51 51.0
Lsat_1_v5_gn_2_40161 Lactuca sativa HOM05D002563 ORTHO05D006856 1.0e-09 66.2 54 53.7
PSO832G2579 Papaver somniferum HOM05D002563 ORTHO05D006856 1.0e-09 66.2 64 43.8
Prupe.2G031200 Prunus persica HOM05D002563 ORTHO05D006856 1.0e-09 66.2 58 43.1
Aqoxy6G02691 Aquilegia oxysepala HOM05D002563 ORTHO05D006856 1.8e-09 65.5 54 50.0
Psat5g296240 Pisum sativum HOM05D002563 ORTHO05D006856 1.8e-09 65.5 51 51.0
QL10p056534 Quercus lobata HOM05D002563 ORTHO05D006856 1.8e-09 65.5 64 39.1
Cc03_g14310 Coffea canephora HOM05D002563 ORTHO05D006856 2.3e-09 65.1 54 50.0
FAN16G1592 Fragaria x ananassa HOM05D002563 ORTHO05D006856 3.0e-09 64.7 54 48.1
Medtr8g064720 Medicago truncatula HOM05D002563 ORTHO05D006856 3.0e-09 64.7 54 50.0
CDE04G3450 Ceratophyllum demersum HOM05D002563 ORTHO05D006856 3.9e-09 64.3 58 46.6
CDE07G0327 Ceratophyllum demersum HOM05D002563 ORTHO05D006856 3.9e-09 64.3 58 46.6
HanXRQChr02g0059111 Helianthus annuus HOM05D002563 ORTHO05D006856 5.1e-09 63.9 54 48.1
Sabra13G0106600 Salix brachista HOM05D002563 ORTHO05D006856 5.1e-09 63.9 54 48.1
AagrBONN_evm.TU.Sc2ySwM_344.2705 Anthoceros agrestis HOM05D002563 ORTHO05D006856 6.7e-09 63.5 64 40.6
Lj1g0002201 Lotus japonicus HOM05D002563 ORTHO05D006856 6.7e-09 63.5 51 49.0
SGA_v2.0_scaffold61G21166 Striga asiatica HOM05D002563 ORTHO05D006856 6.7e-09 63.5 54 48.1
ECA236G2542 Erigeron canadensis HOM05D002563 ORTHO05D006856 8.7e-09 63.2 58 53.4
Migut.D02180 Erythranthe guttata HOM05D002563 ORTHO05D006856 8.7e-09 63.2 54 48.1
MCO05G011 Micromonas commoda HOM05D002563 ORTHO05D006856 8.7e-09 63.2 54 44.4
TPR.G648 Trifolium pratense HOM05D002563 ORTHO05D006856 8.7e-09 63.2 54 48.1
Ca_27098_v3 Cicer arietinum L. HOM05D002563 ORTHO05D006856 1.1e-08 62.8 51 49.0
Psat4g124240 Pisum sativum HOM05D002563 ORTHO05D006856 1.5e-08 62.4 51 49.0
Potri.013G127500 Populus trichocarpa HOM05D002563 ORTHO05D006856 1.5e-08 62.4 54 46.3
SalBow3G1267 Salvia bowleyana HOM05D002563 ORTHO05D006856 1.9e-08 62.0 54 46.3
PRCOL_00003638 Prasinoderma coloniale HOM05D002563 ORTHO05D006856 4.3e-08 60.8 57 43.9
ECA246G2001 Erigeron canadensis HOM05D002563 ORTHO05D006856 5.7e-08 60.5 55 45.5
Zm00001eb169080 Zea mays HOM05D002563 ORTHO05D006856 1.6e-07 58.9 54 48.1
QL02p002150 Quercus lobata HOM05D000048 ORTHO05D000436 2.2e-07 58.5 54 44.4
Medtr7g006040 Medicago truncatula HOM05D002563 ORTHO05D006856 3.7e-07 57.8 47 51.1
Cre17.g718800 Chlamydomonas reinhardtii HOM05D002563 ORTHO05D006856 4.8e-07 57.4 64 37.5
MCO03G600 Micromonas commoda HOM05D002563 ORTHO05D008422 4.8e-07 57.4 57 43.9
AagrBONN_evm.TU.Sc2ySwM_228.874 Anthoceros agrestis HOM05D002563 ORTHO05D008422 1.8e-06 55.5 54 38.9
MCO12G166 Micromonas commoda HOM05D002563 ORTHO05D008422 3.1e-06 54.7 54 38.9
Mapoly0036s0024 Marchantia polymorpha HOM05D002563 ORTHO05D006856 4.1e-06 54.3 54 40.7
PRCOL_00000146 Prasinoderma coloniale HOM05D002563 ORTHO05D008422 5.3e-06 53.9 54 38.9
Lalb_Chr04g0251991 Lupinus albus HOM05D002563 ORTHO05D008422 6.9e-06 53.5 54 40.7
Mapoly0036s0022 Marchantia polymorpha HOM05D002563 ORTHO05D006856 6.9e-06 53.5 54 38.9
ATR0594G062 Amborella trichopoda HOM05D002563 ORTHO05D008422 9.0e-06 53.1 54 42.6


User provided reference genes

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