Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 0.0e+00 1476.8 733 100.0
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 3.2e-269 931.8 743 63.1
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 5.9e-263 911.0 723 63.6
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 3.7e-257 891.7 747 61.8
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 8.3e-257 890.6 747 61.8
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 7.8e-255 884.0 745 61.9
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 2.1e-252 875.9 746 60.6
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 3.6e-252 875.2 755 60.0
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 4.7e-252 874.8 743 61.2
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 9.8e-250 867.1 743 59.9
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 2.4e-248 862.4 740 59.6
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 5.4e-248 861.3 749 59.5
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 5.4e-248 861.3 745 60.1
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 9.2e-248 860.5 742 59.6
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 1.2e-247 860.1 742 59.4
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 1.6e-247 859.8 743 59.4
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 6.0e-247 857.8 753 59.1
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 1.5e-245 853.2 746 57.8
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 4.7e-244 848.2 744 57.7
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 1.8e-243 846.3 740 59.2
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 1.2e-242 843.6 684 61.5
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 1.5e-242 843.2 740 60.0
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 2.0e-242 842.8 745 59.3
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 1.7e-241 839.7 745 58.7
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 5.4e-240 834.7 744 58.7
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 2.1e-239 832.8 751 57.0
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 4.6e-239 831.6 735 59.0
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 1.3e-238 830.1 731 58.4
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 3.9e-238 828.6 748 58.3
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 1.9e-237 826.2 760 57.6
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 1.9e-237 826.2 731 58.1
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 2.5e-237 825.9 742 56.9
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 5.6e-237 824.7 747 56.9
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 2.1e-236 822.8 731 58.8
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 3.6e-236 822.0 742 58.4
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 4.7e-236 821.6 731 58.7
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 1.1e-235 820.5 732 57.9
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 1.4e-235 820.1 733 58.5
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 1.4e-235 820.1 733 58.5
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 1.4e-235 820.1 744 57.1
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 1.4e-235 820.1 742 58.2
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 2.3e-235 819.3 731 58.5
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 3.1e-235 818.9 733 58.5
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 5.2e-235 818.1 745 56.0
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 6.8e-235 817.8 751 56.6
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 1.2e-234 817.0 735 58.2
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 1.2e-234 817.0 738 58.3
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 1.5e-234 816.6 736 58.0
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 2.6e-234 815.8 752 56.6
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 4.4e-234 815.1 735 58.0
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 4.4e-234 815.1 743 56.7
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 3.8e-233 812.0 750 57.6
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 8.4e-233 810.8 734 58.6
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 1.9e-232 809.7 745 56.5
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 2.4e-232 809.3 747 55.3
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 4.1e-232 808.5 767 56.7
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 1.6e-231 806.6 749 55.8
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 2.7e-231 805.8 743 55.5
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 1.0e-230 803.9 737 57.1
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 2.3e-230 802.7 742 57.0
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 1.9e-229 799.7 741 55.9
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 5.6e-229 798.1 743 56.5
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 9.6e-229 797.3 757 55.7
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 1.2e-228 797.0 774 54.0
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 8.1e-228 794.3 734 57.8
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 1.8e-227 793.1 745 55.3
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 3.1e-227 792.3 739 56.8
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 5.2e-227 791.6 662 60.7
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 8.9e-227 790.8 749 56.6
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 2.0e-226 789.6 775 55.6
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 3.4e-226 788.9 744 55.8
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 5.8e-226 788.1 775 55.5
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 3.8e-225 785.4 801 53.4
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 3.2e-224 782.3 778 55.1
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 9.3e-224 780.8 672 59.8
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 1.2e-223 780.4 747 55.4
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 1.7e-222 776.5 768 55.2
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 2.3e-222 776.2 828 51.3
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 6.6e-222 774.6 601 65.7
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 4.0e-219 765.4 765 53.7
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 2.4e-216 756.1 751 54.3
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 4.2e-216 755.4 762 53.8
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 2.7e-215 752.7 760 52.9
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 1.3e-212 743.8 667 57.1
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 3.1e-211 739.2 812 50.5
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 9.9e-210 734.2 731 54.3
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 6.4e-209 731.5 741 52.1
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 3.3e-205 719.2 669 56.2
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 5.6e-205 718.4 665 56.4
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 1.3e-201 707.2 731 50.9
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 1.7e-201 706.8 701 53.6
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 4.6e-199 698.7 752 51.2
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 2.5e-197 693.0 742 51.2
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 1.4e-195 687.2 569 64.0
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 2.4e-195 686.4 668 53.3
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 3.8e-193 679.1 660 53.9
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 5.0e-193 678.7 668 55.4
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 1.3e-190 670.6 762 48.3
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 9.7e-189 664.5 807 47.1
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 7.2e-184 648.3 743 47.2
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 7.9e-183 644.8 743 47.6
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 2.2e-180 636.7 745 49.7
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 7.2e-176 621.7 783 46.4
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 1.7e-172 610.5 632 51.1
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 4.1e-171 605.9 609 54.2
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 7.7e-170 601.7 766 44.9
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 3.2e-168 596.3 445 68.1
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 8.2e-164 581.6 827 42.2
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 1.2e-159 567.8 757 45.4
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 8.0e-159 565.1 661 46.4
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 2.7e-154 550.1 546 53.8
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 1.8e-150 537.3 741 43.6
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 6.8e-150 535.4 920 37.1
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 5.9e-146 522.3 551 51.5
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 4.3e-144 516.2 664 47.3
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 2.3e-134 483.8 392 60.2
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 3.2e-131 473.4 523 47.6
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.3e-95 355.1 399 47.1
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 3.1e-86 323.9 609 34.2
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 6.0e-82 309.7 339 50.4
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 2.4e-78 297.7 375 44.5
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 5.5e-75 286.6 704 30.8
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 3.0e-73 280.8 622 32.6
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 2.7e-58 231.1 227 49.3
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 2.7e-58 231.1 227 49.3
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 9.4e-51 206.1 192 58.3
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 6.3e-47 193.4 539 31.0
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 3.6e-42 177.6 147 58.5
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 5.5e-35 153.7 102 72.5
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 6.8e-33 146.7 77 84.4
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 1.5e-32 145.6 77 85.7
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 2.4e-30 138.3 77 81.8
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 7.0e-30 136.7 170 45.9
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 1.9e-27 128.6 186 41.4
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 3.5e-21 107.8 56 83.9
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 8.0e-18 96.7 175 38.9
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 1.6e-13 82.4 50 70.0
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 2.7e-13 81.6 192 33.3
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 2.3e-12 78.6 100 39.0
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 1.9e-11 75.5 60 58.3
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 2.0e-08 65.5 55 58.2


User provided reference genes

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