Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 0.0e+00 1105.9 559 100.0
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.2e-152 542.7 456 61.2
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 8.0e-143 511.5 526 50.8
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 7.2e-136 488.4 485 53.2
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 9.5e-136 488.0 524 50.8
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 1.6e-135 487.3 531 50.7
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 1.4e-131 474.2 526 50.6
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 2.0e-125 453.8 491 49.3
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 3.4e-125 453.0 445 51.9
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 1.4e-123 447.6 486 51.2
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 9.2e-123 444.9 527 44.6
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 2.0e-122 443.7 496 48.8
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 8.6e-121 438.3 524 47.5
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 4.3e-120 436.0 351 61.5
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 2.8e-119 433.3 528 45.8
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 2.8e-119 433.3 463 49.2
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 3.6e-119 433.0 456 50.0
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 6.2e-119 432.2 461 49.5
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 4.0e-118 429.5 455 48.6
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 4.0e-118 429.5 426 52.1
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 8.9e-118 428.3 525 45.1
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 2.0e-117 427.2 452 50.9
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 4.4e-117 426.0 527 45.4
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 5.8e-117 425.6 504 47.2
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 7.5e-117 425.2 533 45.8
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 2.9e-116 423.3 460 50.4
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 2.9e-116 423.3 530 43.8
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 3.7e-116 422.9 525 43.8
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 4.9e-116 422.5 457 48.1
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 6.4e-116 422.2 462 50.2
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 3.2e-115 419.9 447 50.3
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 1.6e-114 417.5 532 45.7
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 2.1e-114 417.2 465 49.5
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.7e-114 416.8 465 49.5
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 3.9e-113 412.9 444 48.9
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 1.5e-112 411.0 426 49.8
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 7.3e-112 408.7 492 45.5
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 2.1e-111 407.1 493 46.5
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 8.1e-111 405.2 492 47.6
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 8.1e-111 405.2 453 47.9
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 3.1e-110 403.3 446 46.4
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 4.0e-110 402.9 511 45.4
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.5e-109 401.0 491 45.0
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 2.0e-109 400.6 494 43.9
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 4.4e-109 399.4 521 45.5
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 9.9e-109 398.3 565 43.7
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 2.9e-108 396.7 520 44.2
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 1.6e-106 391.0 463 45.4
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 2.7e-106 390.2 466 44.4
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 4.6e-106 389.4 407 50.6
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 5.1e-105 386.0 445 48.3
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 2.5e-104 383.6 421 47.7
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 3.3e-104 383.3 545 42.9
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 3.3e-104 383.3 528 41.5
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 9.5e-104 381.7 502 44.0
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 2.8e-103 380.2 516 42.6
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 6.2e-103 379.0 497 43.1
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 8.1e-103 378.6 529 44.0
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 4.0e-102 376.3 530 40.4
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 1.5e-101 374.4 479 44.7
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 2.6e-101 373.6 531 43.9
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 2.6e-101 373.6 531 43.9
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 3.4e-101 373.2 537 42.3
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 3.4e-101 373.2 454 47.4
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 3.4e-101 373.2 514 40.1
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 5.8e-101 372.5 498 44.0
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 5.8e-101 372.5 520 43.5
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 7.6e-101 372.1 525 42.5
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 7.6e-101 372.1 499 43.9
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 9.9e-101 371.7 530 43.2
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 9.9e-101 371.7 421 46.6
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 1.3e-100 371.3 504 43.7
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 1.7e-100 370.9 538 43.3
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 2.9e-100 370.2 516 42.8
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 6.4e-100 369.0 490 42.2
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 6.4e-100 369.0 531 41.4
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 6.4e-100 369.0 449 44.3
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 8.4e-100 368.6 423 46.6
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 1.1e-99 368.2 449 46.3
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.9e-99 367.5 301 61.5
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 3.2e-99 366.7 445 46.3
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 1.6e-98 364.4 449 43.9
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 2.7e-98 363.6 488 43.0
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 4.6e-98 362.8 369 50.4
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 3.0e-97 360.1 454 43.0
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 2.5e-96 357.1 445 45.8
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 2.5e-96 357.1 445 45.8
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 1.1e-94 351.7 443 44.5
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 1.8e-94 350.9 446 45.5
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 1.8e-94 350.9 446 45.7
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 1.8e-94 350.9 533 38.8
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 1.5e-93 347.8 529 41.2
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 1.7e-92 344.4 454 43.6
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 6.4e-92 342.4 497 39.4
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 6.0e-90 335.9 421 43.9
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 1.3e-89 334.7 449 44.1
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 5.8e-85 319.3 433 43.2
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 9.3e-83 312.0 375 43.2
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 3.2e-75 287.0 441 37.6
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 4.6e-66 256.5 370 37.8
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 1.8e-65 254.6 211 61.1
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.3e-65 254.2 279 49.5
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 4.1e-62 243.4 334 42.5
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.9e-57 226.9 301 44.9
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 1.1e-56 225.3 450 34.9
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 1.1e-54 218.8 282 44.0
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 1.8e-54 218.0 460 38.0
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 1.8e-54 218.0 189 60.3
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 3.1e-54 217.2 491 32.2
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 3.4e-53 213.8 474 35.0
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 2.0e-48 198.0 225 48.4
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 1.8e-46 191.4 428 32.9
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 3.0e-41 174.1 142 61.3
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.2e-37 162.2 125 65.6
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.0e-32 144.8 135 53.3
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 8.5e-28 129.4 141 47.5
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.1e-27 129.0 214 36.4
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 1.9e-27 128.3 119 53.8
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 2.6e-24 117.9 234 31.2
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 1.7e-23 115.2 285 28.4
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.8e-20 104.0 116 42.2
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.8e-18 97.8 92 47.8
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 4.6e-13 80.5 187 33.2
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 3.9e-12 77.4 139 33.1
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 6.4e-07 60.1 75 48.0
Os02g0515000 Oryza sativa ssp. japonica HOM05D006020 ORTHO05D007665 3.2e-06 57.8 151 29.8


User provided reference genes

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