Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 2.6e-144 515.4 263 100.0
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 2.2e-106 389.4 262 73.7
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 1.4e-105 386.7 260 74.6
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 1.7e-103 379.8 260 73.1
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 1.2e-101 373.6 251 74.1
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 1.2e-101 373.6 268 69.4
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 3.6e-101 372.1 257 71.6
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 1.0e-100 370.5 258 69.0
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 3.9e-100 368.6 261 69.7
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 3.9e-100 368.6 258 70.2
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 5.1e-100 368.2 263 68.4
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 1.5e-99 366.7 266 66.9
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 1.5e-99 366.7 263 68.4
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 5.7e-99 364.8 267 68.5
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 5.7e-99 364.8 237 75.5
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 7.4e-99 364.4 243 72.0
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 7.4e-99 364.4 261 69.7
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 9.7e-99 364.0 261 69.3
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 8.2e-98 360.9 252 69.8
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.4e-97 359.4 261 69.0
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 6.9e-97 357.8 250 68.4
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 1.2e-96 357.1 252 69.4
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 2.6e-96 355.9 273 65.9
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 2.6e-96 355.9 261 65.9
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 3.4e-96 355.5 263 66.2
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 5.9e-96 354.8 267 68.5
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 5.9e-96 354.8 267 68.5
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 2.9e-95 352.4 237 71.3
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 2.9e-95 352.4 260 66.9
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 5.0e-95 351.7 263 64.6
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 6.5e-95 351.3 261 65.9
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 6.5e-95 351.3 261 67.8
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 1.1e-94 350.5 268 64.2
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 2.5e-94 349.4 237 70.5
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 3.2e-94 349.0 271 67.2
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 4.2e-94 348.6 261 65.9
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 4.2e-94 348.6 310 59.7
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 9.4e-94 347.4 263 67.3
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 1.6e-93 346.7 264 63.3
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 2.1e-93 346.3 264 63.3
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 4.7e-93 345.1 274 63.9
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 6.1e-93 344.7 263 66.9
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 1.0e-92 344.0 280 62.5
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 1.0e-92 344.0 262 65.6
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 1.8e-92 343.2 261 64.0
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 2.3e-92 342.8 270 62.6
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 2.3e-92 342.8 295 59.7
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 1.5e-91 340.1 261 64.4
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 3.3e-91 339.0 247 69.2
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 3.3e-91 339.0 259 65.3
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 5.7e-91 338.2 278 60.1
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 5.7e-91 338.2 267 64.8
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 5.7e-91 338.2 265 63.4
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 1.7e-90 336.7 227 70.5
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 2.2e-90 336.3 269 63.6
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 4.8e-90 335.1 278 61.2
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 4.8e-90 335.1 278 62.2
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 6.3e-90 334.7 248 65.7
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 1.1e-89 334.0 266 62.0
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 4.1e-89 332.0 247 64.8
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 5.3e-89 331.6 243 65.4
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 7.0e-89 331.3 230 70.0
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 9.1e-89 330.9 250 64.4
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 1.6e-88 330.1 260 63.1
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 2.0e-88 329.7 244 65.6
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 2.6e-88 329.3 213 74.6
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 5.9e-88 328.2 258 64.3
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 1.0e-87 327.4 238 66.4
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 1.5e-86 323.6 248 63.3
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 1.9e-86 323.2 250 63.6
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 2.7e-85 319.3 238 64.7
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 3.6e-85 318.9 249 63.1
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 3.0e-84 315.8 265 63.8
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 1.2e-83 313.9 222 65.3
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 1.2e-83 313.9 212 70.3
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 2.6e-83 312.8 237 62.9
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 4.4e-83 312.0 237 62.0
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 7.5e-83 311.2 213 70.4
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 4.8e-82 308.5 259 59.8
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 4.8e-82 308.5 239 62.8
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 2.4e-81 306.2 212 67.0
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 1.3e-79 300.4 209 70.8
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 2.2e-79 299.7 261 61.7
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 6.1e-77 291.6 265 58.9
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 6.8e-76 288.1 240 62.1
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 3.4e-75 285.8 189 72.0
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 7.5e-75 284.6 244 59.4
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 2.0e-72 276.6 273 56.4
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 3.8e-71 272.3 233 57.9
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 8.6e-71 271.2 252 55.2
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 1.9e-70 270.0 182 69.8
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 1.2e-69 267.3 228 56.6
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 8.3e-66 254.6 218 61.9
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 5.4e-65 251.9 203 61.6
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 1.2e-64 250.8 410 37.8
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.1e-62 244.2 240 56.2
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 2.2e-58 229.9 231 50.6
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 9.2e-57 224.6 185 60.0
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 1.2e-48 197.6 177 56.5
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 4.3e-46 189.1 151 59.6
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 6.0e-40 168.7 151 57.6
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 3.5e-32 142.9 90 75.6
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 2.5e-30 136.7 89 73.0
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.7e-26 124.0 96 59.4
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.1e-22 111.3 72 72.2
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 9.0e-20 101.7 73 61.6
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 5.8e-19 99.0 58 77.6
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 1.2e-16 91.3 81 60.5
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.1e-14 84.7 56 60.7
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 5.6e-14 82.4 70 58.6
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 4.8e-13 79.3 54 59.3
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 6.2e-13 79.0 52 73.1
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.9e-10 70.1 153 30.7
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 3.2e-09 66.6 49 67.3
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 6.0e-08 62.4 100 32.0


User provided reference genes

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