Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.3e-257 892.5 429 100.0
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 1.3e-132 477.2 419 54.9
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 1.1e-131 474.2 422 55.2
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 7.8e-130 468.0 421 54.6
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 1.7e-129 466.8 422 56.4
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 5.0e-129 465.3 421 54.6
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.1e-128 464.2 421 54.2
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 2.5e-128 463.0 423 55.8
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 8.0e-127 458.0 426 52.8
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 8.9e-126 454.5 427 52.9
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.5e-125 453.8 431 52.9
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 1.5e-125 453.8 421 55.6
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 2.0e-125 453.4 425 54.6
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 2.6e-125 453.0 428 53.5
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 1.7e-124 450.3 416 55.8
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 1.1e-123 447.6 419 53.2
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 2.4e-123 446.4 436 53.4
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 3.2e-123 446.0 426 53.3
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 9.2e-123 444.5 413 52.8
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 9.2e-123 444.5 428 53.7
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.6e-122 443.7 422 52.6
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 3.5e-122 442.6 429 52.9
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 7.8e-122 441.4 419 53.0
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 3.9e-121 439.1 423 53.7
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 6.6e-121 438.3 413 54.0
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 1.9e-120 436.8 419 52.7
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 2.5e-120 436.4 421 53.7
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 2.1e-119 433.3 425 52.2
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 2.1e-119 433.3 429 52.7
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 1.8e-118 430.3 431 51.0
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 4.0e-118 429.1 429 52.7
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 4.0e-118 429.1 433 50.8
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 2.6e-117 426.4 423 51.3
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 4.4e-117 425.6 425 52.2
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 9.9e-117 424.5 441 49.7
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 1.3e-116 424.1 443 50.6
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 1.7e-116 423.7 425 51.1
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 1.7e-116 423.7 437 51.0
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 3.7e-116 422.5 419 51.1
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 4.9e-116 422.2 424 50.5
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 6.4e-116 421.8 433 52.2
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.1e-115 421.0 417 51.8
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 1.4e-115 420.6 418 51.4
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 3.2e-115 419.5 427 51.5
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 7.1e-115 418.3 432 50.0
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 1.6e-114 417.2 426 50.0
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.6e-114 417.2 451 49.4
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.6e-114 417.2 451 49.4
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 2.1e-114 416.8 419 50.6
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 2.1e-114 416.8 419 50.6
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 2.7e-114 416.4 419 50.4
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 4.6e-114 415.6 417 50.4
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 6.0e-114 415.2 420 50.7
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 1.0e-113 414.5 404 51.5
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.3e-113 414.1 455 49.0
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 3.0e-113 412.9 417 49.6
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 2.5e-112 409.8 424 48.8
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 3.3e-112 409.5 442 50.5
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 4.3e-112 409.1 423 49.6
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 4.3e-112 409.1 415 50.8
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 5.6e-112 408.7 421 49.2
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 7.3e-112 408.3 541 42.7
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 9.5e-112 407.9 425 49.4
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 1.2e-111 407.5 426 50.5
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 2.8e-111 406.4 419 48.4
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 3.6e-111 406.0 441 48.3
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 1.4e-110 404.1 332 58.7
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 4.0e-110 402.5 420 49.8
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 6.8e-110 401.7 435 47.8
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 6.8e-110 401.7 474 46.4
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 2.6e-109 399.8 430 47.9
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 9.9e-109 397.9 438 47.9
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 3.8e-108 396.0 419 47.5
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.9e-107 393.7 416 48.8
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 4.2e-107 392.5 424 49.3
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.7e-105 387.1 419 48.4
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 2.6e-101 373.2 377 52.0
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 5.8e-101 372.1 435 45.3
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.1e-99 367.9 378 50.5
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 4.2e-99 365.9 387 50.6
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 2.1e-98 363.6 357 53.2
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 3.5e-98 362.8 380 51.8
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 3.9e-97 359.4 442 44.1
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 3.9e-97 359.4 433 44.6
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 1.5e-96 357.5 404 47.3
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.3e-95 354.4 450 44.7
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 1.4e-94 350.9 452 45.6
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 1.8e-94 350.5 402 46.3
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 3.4e-93 346.3 437 44.9
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 1.6e-90 337.4 341 51.9
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 1.1e-88 331.3 335 51.6
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 3.3e-88 329.7 379 48.0
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 6.2e-87 325.5 367 45.8
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 2.0e-85 320.5 290 53.4
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 6.5e-84 315.5 357 49.6
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.4e-65 254.6 344 41.9
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.4e-59 234.6 344 40.4
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 2.7e-58 230.3 191 55.0
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.0e-56 224.2 308 39.9
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 5.3e-54 216.1 398 32.7
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 7.7e-53 212.2 161 59.6
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 2.0e-45 187.6 230 43.5
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 1.4e-41 174.9 237 43.5
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 4.5e-37 159.8 224 43.3
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.2e-25 119.8 157 42.0
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 5.6e-19 99.8 83 56.6
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 3.6e-18 97.1 178 36.5
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 9.8e-16 89.0 159 34.0
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 7.8e-13 79.3 62 56.5
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.0e-12 79.0 202 29.2
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 5.4e-06 56.6 94 40.4


User provided reference genes

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