Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G234 Amborella trichopoda HOM05D003123 ORTHO05D003492 4.2e-26 120.6 59 100.0
ATR1136G200 Amborella trichopoda HOM05D003123 ORTHO05D003492 6.7e-24 113.2 58 91.4
ATR1136G090 Amborella trichopoda HOM05D003123 ORTHO05D003492 1.5e-23 112.1 58 91.4
Oeu023005.1 Olea europaea HOM05D003123 ORTHO05D003492 5.9e-12 73.6 58 63.8
ECA240G3446 Erigeron canadensis HOM05D003123 ORTHO05D003492 7.2e-10 66.6 59 59.3
HanXRQChr17g0548851 Helianthus annuus HOM05D003123 ORTHO05D003492 7.2e-10 66.6 58 55.2
Oeu060760.2 Olea europaea HOM05D003123 ORTHO05D003492 7.2e-10 66.6 58 58.6
CiPaw.04G013100 Carya illinoinensis HOM05D003123 ORTHO05D003492 9.4e-10 66.2 58 56.9
Migut.K00168 Erythranthe guttata HOM05D003123 ORTHO05D003492 2.1e-09 65.1 58 55.2
Nn1g02901 Nelumbo nucifera HOM05D003123 ORTHO05D003492 2.1e-09 65.1 58 56.9
Prupe.1G551600 Prunus persica HOM05D003123 ORTHO05D003492 2.7e-09 64.7 58 56.9
Lj2C730T10 Lonicera japonica HOM05D003123 ORTHO05D003492 3.6e-09 64.3 58 56.9
Aa31LG4G8580 Aethionema arabicum HOM05D003123 ORTHO05D003492 4.7e-09 63.9 59 55.9
COL.COLO4_33458 Corchorus olitorius HOM05D003123 ORTHO05D003492 4.7e-09 63.9 58 55.2
Cfa020612 Carpinus fangiana HOM05D003123 ORTHO05D003492 6.1e-09 63.5 58 55.2
Atru.chr7.2717 Acer truncatum HOM05D003123 ORTHO05D003492 1.8e-08 62.0 58 53.4
Gohir.A05G123100 Gossypium hirsutum HOM05D003123 ORTHO05D003492 1.8e-08 62.0 58 53.4
PGR042G0103 Punica granatum HOM05D003123 ORTHO05D003492 1.8e-08 62.0 61 52.5
RcHm_v2.0_Chr2g0090591 Rosa chinensis HOM05D003123 ORTHO05D003492 1.8e-08 62.0 58 51.7
Gorai.009G288800 Gossypium raimondii HOM05D003123 ORTHO05D003492 2.3e-08 61.6 58 55.2
TAR636G3452 Trochodendron aralioides HOM05D003123 ORTHO05D003492 2.3e-08 61.6 58 53.4
Actinidia37868 Actinidia chinensis HOM05D003123 ORTHO05D003492 3.9e-08 60.8 62 50.0
Duzib235G1283 Durio zibethinus HOM05D003123 ORTHO05D003492 5.1e-08 60.5 58 51.7
Gorai.009G128000 Gossypium raimondii HOM05D003123 ORTHO05D003492 5.1e-08 60.5 58 51.7
Nitab4.5_0001270g0190 Nicotiana tabacum HOM05D003123 ORTHO05D003492 5.1e-08 60.5 61 57.4
Atru.chr10.2419 Acer truncatum HOM05D003123 ORTHO05D003492 6.7e-08 60.1 58 55.2
HanXRQChr10g0308101 Helianthus annuus HOM05D003123 ORTHO05D003492 6.7e-08 60.1 59 54.2
Hma1.2p1_0016F.1_g010890 Hydrangea macrophylla HOM05D003123 ORTHO05D003492 6.7e-08 60.1 62 50.0
MBI03_g18675_MAGBIO Magnolia biondii HOM05D003123 ORTHO05D003492 6.7e-08 60.1 60 55.0
SGA_v2.0_scaffold106G30554 Striga asiatica HOM05D003123 ORTHO05D003492 6.7e-08 60.1 58 55.2
Aqoxy3G04121 Aquilegia oxysepala HOM05D003123 ORTHO05D003492 8.8e-08 59.7 59 55.9
CARHR064860 Cardamine hirsuta HOM05D003123 ORTHO05D003492 8.8e-08 59.7 59 54.2
Cfa008139 Carpinus fangiana HOM05D003123 ORTHO05D003492 8.8e-08 59.7 58 53.4
Eucgr.A00553 Eucalyptus grandis HOM05D003123 ORTHO05D003492 8.8e-08 59.7 58 51.7
Nitab4.5_0012379g0010 Nicotiana tabacum HOM05D003123 ORTHO05D003492 8.8e-08 59.7 62 54.8
Eucgr.A00580 Eucalyptus grandis HOM05D003123 ORTHO05D003492 1.1e-07 59.3 57 49.1
Peaxi162Scf00324g00531 Petunia axillaris HOM05D003123 ORTHO05D003492 1.1e-07 59.3 62 53.2
QL09p005009 Quercus lobata HOM05D003123 ORTHO05D003492 1.1e-07 59.3 58 53.4
THA.LOC104800122 Tarenaya hassleriana HOM05D003123 ORTHO05D003492 1.1e-07 59.3 61 52.5
THA.LOC104818694 Tarenaya hassleriana HOM05D003123 ORTHO05D003492 1.1e-07 59.3 60 53.3
Gohir.D05G124000 Gossypium hirsutum HOM05D003123 ORTHO05D003492 1.5e-07 58.9 58 50.0
FAN12G0368 Fragaria x ananassa HOM05D003123 ORTHO05D003492 2.0e-07 58.5 58 53.4
FAN12G2362 Fragaria x ananassa HOM05D003123 ORTHO05D003492 2.0e-07 58.5 58 53.4
Manes.02G195200 Manihot esculenta HOM05D003123 ORTHO05D003492 2.0e-07 58.5 58 51.7
Peaxi162Scf00538g00224 Petunia axillaris HOM05D003123 ORTHO05D003492 2.0e-07 58.5 59 50.8
AUR62018436 Chenopodium quinoa HOM05D003123 ORTHO05D003492 2.6e-07 58.2 61 50.8
AUR62020997 Chenopodium quinoa HOM05D003123 ORTHO05D003492 2.6e-07 58.2 59 50.8
Nitab4.5_0000123g0230 Nicotiana tabacum HOM05D003123 ORTHO05D003492 2.6e-07 58.2 61 55.7
Nitab4.5_0006880g0010 Nicotiana tabacum HOM05D003123 ORTHO05D003492 2.6e-07 58.2 63 50.8
SalBow1G3749 Salvia bowleyana HOM05D003123 ORTHO05D003492 2.6e-07 58.2 58 51.7
Cfa008143 Carpinus fangiana HOM05D003123 ORTHO05D003492 3.3e-07 57.8 58 53.4
Os02g0116000 Oryza sativa ssp. japonica HOM05D003123 ORTHO05D003492 3.3e-07 57.8 64 48.4
BcaC08g45739 Brassica carinata HOM05D003123 ORTHO05D003492 4.4e-07 57.4 60 55.0
C06p35180 Brassica napus HOM05D003123 ORTHO05D003492 4.4e-07 57.4 60 55.0
BolC6t38625H Brassica oleracea HOM05D003123 ORTHO05D003492 4.4e-07 57.4 60 55.0
FvH4_1g04960 Fragaria vesca HOM05D003123 ORTHO05D003492 4.4e-07 57.4 58 50.0
FAN19G0040 Fragaria x ananassa HOM05D003123 ORTHO05D003492 4.4e-07 57.4 58 50.0
FAN23G0770 Fragaria x ananassa HOM05D003123 ORTHO05D003492 4.4e-07 57.4 58 50.0
SGA_v2.0_scaffold413G51179 Striga asiatica HOM05D003123 ORTHO05D003492 4.4e-07 57.4 61 54.1
TWI60G0704 Tripterygium wilfordii HOM05D003123 ORTHO05D003492 4.4e-07 57.4 58 50.0
A02p17650 Brassica napus HOM05D003123 ORTHO05D003492 5.7e-07 57.0 61 59.0
A07p30420 Brassica napus HOM05D003123 ORTHO05D003492 5.7e-07 57.0 60 55.0
BraA07t30679Z Brassica rapa HOM05D003123 ORTHO05D003492 5.7e-07 57.0 60 55.0
BcaB03g15643 Brassica carinata HOM05D003123 ORTHO05D003492 7.4e-07 56.6 64 56.2
BcaB05g24702 Brassica carinata HOM05D003123 ORTHO05D003492 7.4e-07 56.6 61 59.0
Manes.02G205100 Manihot esculenta HOM05D003123 ORTHO05D003492 7.4e-07 56.6 58 50.0
ECA234G4206 Erigeron canadensis HOM05D001066 ORTHO05D000891 9.7e-07 56.2 58 53.4
Potri.019G081100 Populus trichocarpa HOM05D003123 ORTHO05D003492 9.7e-07 56.2 58 48.3
SalBow1G3093 Salvia bowleyana HOM05D003123 ORTHO05D003492 9.7e-07 56.2 58 51.7
Sp5g27120 Schrenkiella parvula HOM05D003123 ORTHO05D003492 9.7e-07 56.2 59 57.6
Dinv40311 Davidia involucrata HOM05D003123 ORTHO05D003492 1.3e-06 55.8 59 52.5
Sabra13G0093900 Salix brachista HOM05D003123 ORTHO05D003492 1.3e-06 55.8 58 50.0
TWI18G0703 Tripterygium wilfordii HOM05D003123 ORTHO05D003492 1.3e-06 55.8 58 48.3
Actinidia17974 Actinidia chinensis HOM05D003123 ORTHO05D003492 1.7e-06 55.5 59 52.5
Eucgr.C02983 Eucalyptus grandis HOM05D003123 ORTHO05D003492 1.7e-06 55.5 58 51.7
FAN07G0983 Fragaria x ananassa HOM05D003123 ORTHO05D003492 1.7e-06 55.5 58 51.7
MD15G1411000 Malus domestica HOM05D003123 ORTHO05D003492 1.7e-06 55.5 58 50.0
Potri.013G108600 Populus trichocarpa HOM05D003123 ORTHO05D003492 1.7e-06 55.5 58 50.0
MBI01_g42407_MAGBIO Magnolia biondii HOM05D003123 ORTHO05D003492 2.2e-06 55.1 58 48.3
TPR.G1421 Trifolium pratense HOM05D003123 ORTHO05D003492 2.2e-06 55.1 58 48.3
MD02G1048300 Malus domestica HOM05D003123 ORTHO05D003492 2.8e-06 54.7 58 46.6
Sabra19G0092000 Salix brachista HOM05D003123 ORTHO05D003492 2.8e-06 54.7 58 46.6
HPP92_013254 Vanilla planifolia HOM05D003123 ORTHO05D003492 2.8e-06 54.7 60 45.0
PSO339G0960 Papaver somniferum HOM05D003123 ORTHO05D003492 3.7e-06 54.3 58 50.0
BcaC03g15328 Brassica carinata HOM05D003123 ORTHO05D003492 4.8e-06 53.9 61 55.7
C02p29330 Brassica napus HOM05D003123 ORTHO05D003492 4.8e-06 53.9 61 55.7
Eucgr.A00584 Eucalyptus grandis HOM05D003123 ORTHO05D003492 6.3e-06 53.5 58 46.6
FAN26G3425 Fragaria x ananassa HOM05D003123 ORTHO05D003492 6.3e-06 53.5 58 48.3
PSO384G3002 Papaver somniferum HOM05D003123 ORTHO05D003492 8.2e-06 53.1 58 50.0
Thecc.08G187200 Theobroma cacao HOM05D003123 ORTHO05D003492 8.2e-06 53.1 59 50.8
Zm00001eb265630 Zea mays HOM05D003123 ORTHO05D003492 8.2e-06 53.1 60 46.7


User provided reference genes

Program Settings