Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 0.0e+00 1235.3 731 100.0
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 1.3e-108 398.3 578 48.8
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 1.3e-105 388.3 616 45.3
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 3.1e-102 377.1 602 45.7
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 1.2e-98 365.2 594 46.1
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 7.6e-93 345.9 586 45.1
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 6.4e-92 342.8 604 45.9
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 1.9e-91 341.3 604 44.5
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.4e-91 340.9 554 44.2
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 3.2e-91 340.5 606 45.7
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 6.7e-89 332.8 616 43.5
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.9e-88 331.3 563 42.1
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 2.5e-88 330.9 603 44.1
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.3e-87 328.6 556 43.2
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 4.8e-87 326.6 568 41.4
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 1.1e-86 325.5 567 46.6
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 1.1e-86 325.5 617 39.9
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 6.9e-86 322.8 589 42.1
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 2.0e-85 321.2 561 43.3
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 2.6e-85 320.9 563 41.4
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 5.8e-85 319.7 589 43.1
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 7.6e-85 319.3 608 42.6
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 1.4e-83 315.1 567 45.1
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 9.3e-83 312.4 579 42.7
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 1.6e-82 311.6 607 42.2
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 1.6e-82 311.6 606 38.8
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 2.3e-81 307.8 610 41.5
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 6.7e-81 306.2 599 40.4
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 6.7e-81 306.2 567 45.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 8.7e-81 305.8 582 40.0
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.9e-80 304.7 595 40.3
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 1.9e-80 304.7 554 39.9
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 1.9e-80 304.7 628 39.8
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 2.8e-79 300.8 597 41.9
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 2.8e-79 300.8 619 39.1
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 4.8e-79 300.1 579 43.2
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 4.8e-79 300.1 626 38.8
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.8e-78 298.1 604 41.1
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 2.4e-78 297.7 599 41.4
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 5.3e-78 296.6 566 44.0
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 4.5e-77 293.5 567 41.6
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 8.4e-76 289.3 753 35.3
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.1e-75 288.9 596 41.3
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 1.1e-75 288.9 570 40.2
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 4.2e-75 287.0 596 41.1
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 4.2e-75 287.0 598 39.3
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 1.6e-74 285.0 561 42.1
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 2.1e-74 284.6 596 40.9
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 7.9e-74 282.7 577 40.6
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 7.9e-74 282.7 635 38.6
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 3.0e-73 280.8 544 40.4
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 3.9e-73 280.4 522 42.7
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 1.5e-72 278.5 577 42.6
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 3.3e-72 277.3 538 42.2
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 7.4e-72 276.2 552 39.3
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 1.3e-71 275.4 604 39.6
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.8e-71 274.2 623 37.9
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 3.7e-71 273.9 618 40.5
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 3.7e-71 273.9 577 40.0
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 8.2e-71 272.7 613 37.2
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 8.2e-71 272.7 581 38.4
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 3.1e-70 270.8 574 38.2
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 2.0e-69 268.1 610 36.9
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 2.0e-69 268.1 598 39.5
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 5.9e-69 266.5 614 36.2
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.3e-68 265.4 489 40.7
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.3e-68 265.4 646 37.9
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 5.0e-68 263.5 598 37.0
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 6.5e-68 263.1 631 37.9
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 1.9e-67 261.5 571 38.0
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 7.2e-67 259.6 569 39.7
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 1.3e-63 248.8 585 38.5
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 9.1e-62 242.7 541 37.7
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 7.7e-61 239.6 594 37.9
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 7.2e-59 233.0 548 36.1
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 7.2e-59 233.0 548 36.1
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.6e-58 231.9 578 36.0
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 4.6e-58 230.3 446 41.9
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.8e-57 228.4 583 36.2
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 8.8e-57 226.1 581 35.5
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 3.4e-53 214.2 608 33.6
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 1.4e-51 208.8 291 46.0
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 7.2e-51 206.5 561 34.8
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 2.2e-47 194.9 608 32.7
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 1.1e-46 192.6 505 35.2
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 5.3e-46 190.3 604 35.1
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 4.5e-45 187.2 597 35.3
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 5.9e-45 186.8 626 32.9
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 1.0e-44 186.0 602 36.2
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 1.0e-44 186.0 606 33.3
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 2.2e-44 184.9 463 38.0
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 2.9e-44 184.5 643 33.1
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.6e-42 178.7 629 33.1
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 2.7e-42 177.9 618 35.0
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 2.3e-41 174.9 592 35.0
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 2.3e-41 174.9 592 35.0
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 2.0e-40 171.8 599 34.1
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 2.6e-40 171.4 605 34.5
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 2.0e-37 161.8 570 33.3
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 3.8e-36 157.5 599 32.1
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 5.5e-35 153.7 621 29.3
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 5.5e-35 153.7 583 30.9
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 5.5e-35 153.7 583 30.9
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.6e-34 152.1 580 29.1
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 4.0e-33 147.5 442 32.4
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 9.8e-32 142.9 582 30.2
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.1e-30 139.4 335 36.4
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 1.5e-27 129.0 214 43.5
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 9.5e-27 126.3 501 28.5
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 8.3e-23 113.2 368 35.1
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 1.8e-22 112.1 222 42.3
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.4e-17 95.9 174 45.4
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 1.2e-16 92.8 198 38.9
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 3.5e-13 81.3 148 44.6
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 5.8e-08 63.9 60 60.0
Nn1g08524 Nelumbo nucifera HOM05D000558 ORTHO05D003119 4.1e-06 57.8 40 57.5


User provided reference genes

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