Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 0.0e+00 1353.2 647 100.0
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 4.4e-312 1073.5 646 76.9
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 2.0e-299 1031.9 646 74.0
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 2.5e-297 1025.0 645 72.6
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 3.2e-297 1024.6 645 72.2
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 3.2e-297 1024.6 636 74.1
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 1.2e-296 1022.7 643 72.9
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 2.1e-296 1021.9 641 72.7
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 4.7e-296 1020.8 645 71.0
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 1.0e-295 1019.6 646 72.0
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 1.0e-295 1019.6 646 71.7
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 2.3e-295 1018.5 646 72.0
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 2.0e-294 1015.4 646 71.2
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 3.4e-294 1014.6 647 72.0
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 4.4e-294 1014.2 646 70.6
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 5.7e-294 1013.8 651 72.0
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 3.7e-293 1011.1 637 72.7
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 6.3e-293 1010.4 640 72.2
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 8.3e-293 1010.0 645 71.5
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 2.4e-292 1008.4 645 71.3
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 2.4e-292 1008.4 646 70.7
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 2.4e-292 1008.4 646 72.0
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 3.1e-292 1008.1 646 71.8
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 4.1e-292 1007.7 639 70.9
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 5.4e-292 1007.3 639 70.7
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 9.2e-292 1006.5 646 71.4
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 1.2e-291 1006.1 646 70.4
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 2.7e-291 1005.0 692 68.6
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 7.8e-291 1003.4 651 69.9
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 7.8e-291 1003.4 637 71.9
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 1.3e-290 1002.7 646 70.1
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 2.3e-290 1001.9 646 70.7
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 6.6e-290 1000.3 649 72.1
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 6.6e-290 1000.3 646 70.0
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 3.3e-289 998.0 659 69.0
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 3.3e-289 998.0 651 70.4
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 7.3e-289 996.9 649 71.5
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 9.5e-289 996.5 644 71.0
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 2.8e-288 995.0 650 69.4
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 3.6e-288 994.6 650 69.7
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 6.1e-288 993.8 638 72.1
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 1.4e-287 992.6 645 69.5
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 1.8e-287 992.3 646 70.6
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 3.0e-287 991.5 646 71.1
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 6.8e-287 990.3 650 68.6
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 1.5e-286 989.2 638 72.4
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 3.4e-286 988.0 633 72.4
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 1.7e-285 985.7 633 73.3
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 6.4e-285 983.8 650 69.4
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 6.4e-285 983.8 651 69.0
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 8.3e-285 983.4 646 70.3
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 8.3e-285 983.4 682 67.0
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 7.0e-284 980.3 639 69.8
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 9.2e-284 979.9 646 69.5
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 9.2e-284 979.9 637 68.9
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 1.2e-283 979.5 664 67.5
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 1.0e-282 976.5 629 70.0
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 1.0e-282 976.5 647 69.7
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 1.7e-282 975.7 658 67.6
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 1.1e-281 973.0 642 69.9
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 2.5e-281 971.8 645 70.2
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 4.3e-281 971.1 722 64.1
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 2.8e-280 968.4 635 68.8
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 3.6e-280 968.0 635 69.0
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 6.2e-280 967.2 635 68.5
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 1.1e-279 966.5 646 67.8
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 4.0e-279 964.5 638 68.5
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 8.9e-279 963.4 635 68.7
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 8.9e-279 963.4 643 67.8
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 2.0e-278 962.2 636 68.9
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 4.4e-278 961.1 651 68.7
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 2.9e-277 958.4 645 67.6
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 1.1e-276 956.4 646 67.3
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 2.4e-276 955.3 635 68.2
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 7.0e-276 953.7 634 68.0
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 2.0e-275 952.2 638 70.5
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 7.8e-275 950.3 635 68.0
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 7.8e-275 950.3 635 68.0
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 7.8e-275 950.3 635 68.0
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 3.0e-274 948.3 646 68.7
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 8.6e-274 946.8 800 58.0
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 4.3e-273 944.5 612 71.1
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 1.8e-271 939.1 608 70.1
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 6.8e-271 937.2 594 70.9
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 6.0e-267 924.1 592 71.8
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 1.2e-264 916.4 594 70.7
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 4.7e-264 914.4 793 56.7
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 9.9e-262 906.7 599 70.8
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 3.1e-255 885.2 646 65.0
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 7.1e-252 874.0 641 63.7
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 2.7e-251 872.1 644 63.4
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 1.0e-250 870.2 557 69.8
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 2.0e-246 855.9 575 68.3
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 3.7e-240 835.1 638 64.1
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 6.9e-239 830.9 649 60.4
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 4.5e-230 801.6 544 67.3
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 5.9e-182 641.7 364 77.2
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 2.5e-180 636.3 512 60.0
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 4.1e-151 539.3 543 50.3
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 3.0e-149 533.1 366 67.5
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 4.9e-144 515.8 537 49.7
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 4.6e-142 509.2 378 62.7
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.3e-141 507.7 369 64.0
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 5.7e-116 422.5 241 76.8
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 2.4e-82 310.8 738 31.4
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 1.6e-78 298.1 152 86.8
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 9.5e-55 219.2 255 45.9
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 3.4e-44 184.1 198 47.0
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 3.4e-28 131.0 90 71.1
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 4.4e-28 130.6 72 84.7
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 2.4e-26 124.8 70 77.1
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 3.9e-24 117.5 70 74.3
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.9e-23 115.2 71 70.4
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 9.0e-21 106.3 94 57.4
CBR_g55378 Chara braunii HOM05D006576 ORTHO05D028753 1.3e-19 102.4 95 54.7
Atru.chr11.1906 Acer truncatum HOM05D006576 ORTHO05D008644 2.2e-19 101.7 65 67.7
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 3.5e-17 94.4 64 68.8
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 3.5e-17 94.4 64 68.8
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 3.5e-17 94.4 64 68.8
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 3.0e-16 91.3 64 59.4
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.1e-13 82.8 52 69.2
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 1.3e-11 75.9 102 41.2
AL4G26800 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 1.2e-09 69.3 99 43.4


User provided reference genes

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