Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 9.6e-80 300.1 147 100.0
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.2e-69 266.5 143 91.6
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 3.1e-30 135.6 141 49.6
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 3.5e-29 132.1 142 50.0
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 1.3e-28 130.2 138 47.1
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 2.7e-26 122.5 140 45.7
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 4.7e-26 121.7 145 47.6
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 8.0e-26 120.9 149 48.3
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 8.0e-26 120.9 143 44.8
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 2.3e-25 119.4 139 46.8
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.0e-25 119.0 136 47.1
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.0e-25 119.0 136 46.3
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.0e-25 119.0 136 46.3
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 5.2e-25 118.2 137 48.2
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 6.8e-25 117.9 136 47.8
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 6.8e-25 117.9 136 46.3
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 1.2e-24 117.1 144 45.1
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 1.5e-24 116.7 136 46.3
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 2.6e-24 115.9 138 44.9
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 3.4e-24 115.5 139 45.3
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 3.4e-24 115.5 143 46.2
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 5.7e-24 114.8 143 44.8
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 9.8e-24 114.0 143 45.5
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 9.8e-24 114.0 140 45.0
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 9.8e-24 114.0 142 44.4
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 1.7e-23 113.2 142 45.1
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 1.7e-23 113.2 138 45.7
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 2.2e-23 112.8 139 46.8
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.2e-23 112.8 141 43.3
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 2.2e-23 112.8 141 43.3
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.8e-23 112.5 137 44.5
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 2.8e-23 112.5 143 44.8
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 3.7e-23 112.1 139 46.0
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 4.8e-23 111.7 142 46.5
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 6.3e-23 111.3 139 44.6
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 8.3e-23 110.9 140 42.1
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 1.1e-22 110.5 146 41.8
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.1e-22 109.0 142 46.5
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 4.1e-22 108.6 143 43.4
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 5.4e-22 108.2 138 42.8
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 7.0e-22 107.8 136 47.1
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 9.1e-22 107.5 140 43.6
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 9.1e-22 107.5 141 42.6
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 1.2e-21 107.1 141 46.8
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 2.0e-21 106.3 141 46.1
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 3.5e-21 105.5 139 46.8
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 5.9e-21 104.8 136 44.9
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 7.7e-21 104.4 147 42.9
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 1.0e-20 104.0 137 46.0
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 1.3e-20 103.6 136 44.1
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 1.3e-20 103.6 136 41.9
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 1.7e-20 103.2 145 42.1
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 2.3e-20 102.8 142 40.8
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 2.3e-20 102.8 136 41.9
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 2.3e-20 102.8 136 41.9
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 3.8e-20 102.1 141 43.3
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 6.6e-20 101.3 137 45.3
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 8.6e-20 100.9 138 45.7
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 1.9e-19 99.8 169 37.3
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 2.5e-19 99.4 137 42.3
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 4.2e-19 98.6 137 40.1
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 7.2e-19 97.8 136 43.4
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 7.2e-19 97.8 136 43.4
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 7.2e-19 97.8 136 44.9
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 1.2e-18 97.1 141 43.3
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 1.6e-18 96.7 136 42.6
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 2.1e-18 96.3 136 41.2
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 2.1e-18 96.3 136 42.6
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 2.1e-18 96.3 136 42.6
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 2.1e-18 96.3 136 41.9
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 4.7e-18 95.1 136 44.1
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 4.7e-18 95.1 136 42.6
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 1.0e-17 94.0 143 42.7
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 1.8e-17 93.2 137 39.4
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 3.0e-17 92.4 136 41.9
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 5.2e-17 91.7 136 42.6
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 1.5e-16 90.1 136 41.2
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 3.4e-16 89.0 136 41.2
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 4.4e-16 88.6 148 35.8
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 4.4e-16 88.6 140 37.9
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 9.8e-16 87.4 136 37.5
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 2.2e-15 86.3 117 41.0
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 3.7e-15 85.5 136 39.0
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 6.3e-15 84.7 141 38.3
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 8.3e-15 84.3 141 41.1
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 1.4e-14 83.6 136 37.5
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 9.2e-14 80.9 139 37.4
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.0e-13 79.7 66 53.0
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.0e-13 79.7 66 53.0
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 4.5e-13 78.6 149 34.2
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 2.3e-12 76.3 141 36.9
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 2.3e-12 76.3 141 38.3
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 8.6e-12 74.3 138 39.1
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 4.3e-11 72.0 141 37.6
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 5.6e-11 71.6 80 42.5
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 2.3e-09 66.2 62 53.2
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 3.4e-08 62.4 39 69.2


User provided reference genes

Program Settings