Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 2.5e-107 392.1 197 100.0
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 1.2e-56 223.8 172 64.0
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 2.0e-56 223.0 199 58.8
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 3.8e-55 218.8 206 53.9
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 3.5e-53 212.2 178 61.8
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 3.5e-53 212.2 188 55.3
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 7.9e-53 211.1 205 56.1
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 1.3e-52 210.3 196 54.1
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 1.3e-52 210.3 211 53.6
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 3.0e-52 209.1 199 56.8
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 8.7e-52 207.6 211 53.1
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 1.5e-51 206.8 171 58.5
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 2.5e-51 206.1 201 55.7
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 3.3e-51 205.7 160 61.9
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 7.4e-51 204.5 160 62.5
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 7.4e-51 204.5 188 57.4
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 9.6e-51 204.1 183 55.2
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 9.6e-51 204.1 183 56.8
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 1.3e-50 203.8 205 53.7
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 2.1e-50 203.0 199 55.3
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 2.1e-50 203.0 162 61.1
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 2.8e-50 202.6 160 62.5
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 4.8e-50 201.8 192 55.2
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 6.2e-50 201.4 191 55.0
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 1.1e-49 200.7 171 58.5
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.1e-49 200.7 160 59.4
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.4e-49 200.3 161 61.5
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 1.4e-49 200.3 173 60.1
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 1.4e-49 200.3 161 60.9
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 1.8e-49 199.9 190 54.2
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 2.4e-49 199.5 160 60.0
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 2.4e-49 199.5 173 59.5
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 2.4e-49 199.5 163 61.3
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 3.1e-49 199.1 185 56.2
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 6.9e-49 198.0 181 58.6
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 6.9e-49 198.0 185 55.1
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 6.9e-49 198.0 185 56.8
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 6.9e-49 198.0 175 54.9
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 6.9e-49 198.0 193 54.9
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.2e-48 197.2 205 52.7
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 1.2e-48 197.2 199 52.3
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 1.5e-48 196.8 177 56.5
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 1.5e-48 196.8 208 51.4
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 2.0e-48 196.4 182 56.0
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 2.0e-48 196.4 186 55.4
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 2.6e-48 196.1 201 52.7
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 2.6e-48 196.1 201 52.7
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 2.6e-48 196.1 201 52.7
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 2.6e-48 196.1 203 53.7
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 2.6e-48 196.1 184 54.3
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 5.8e-48 194.9 182 55.5
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.0e-47 194.1 182 55.5
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 1.3e-47 193.7 201 51.7
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 1.3e-47 193.7 181 56.9
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 1.7e-47 193.4 179 58.7
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.7e-47 193.4 161 59.6
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.7e-47 193.4 194 55.2
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 2.9e-47 192.6 207 52.7
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 6.5e-47 191.4 201 51.2
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 8.4e-47 191.0 194 52.6
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 1.9e-46 189.9 191 51.3
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 4.2e-46 188.7 177 54.8
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 4.2e-46 188.7 157 59.9
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 5.5e-46 188.3 158 58.9
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 7.1e-46 188.0 182 53.3
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 9.3e-46 187.6 175 54.9
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 9.3e-46 187.6 163 58.3
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 9.3e-46 187.6 190 54.2
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 1.6e-45 186.8 202 51.5
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.6e-45 186.8 209 49.3
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.6e-45 186.8 167 53.9
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.7e-45 186.0 162 58.0
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 4.6e-45 185.3 162 55.6
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 7.9e-45 184.5 180 52.2
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 1.0e-44 184.1 163 56.4
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 1.3e-44 183.7 170 54.1
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.3e-44 183.7 189 51.3
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 1.3e-44 183.7 172 53.5
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.3e-44 183.7 160 57.5
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.3e-44 183.7 167 53.9
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 2.3e-44 183.0 172 54.7
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 2.3e-44 183.0 156 60.3
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.0e-44 182.6 188 50.5
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 3.0e-44 182.6 148 59.5
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 3.9e-44 182.2 166 53.6
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.1e-43 180.6 171 55.0
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.1e-43 180.6 184 51.6
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 1.5e-43 180.3 162 54.9
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 1.5e-43 180.3 211 47.4
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 1.9e-43 179.9 202 49.5
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 1.9e-43 179.9 186 50.0
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 4.8e-42 175.3 159 56.0
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 8.2e-42 174.5 180 51.7
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 1.1e-41 174.1 190 49.5
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.4e-41 173.7 179 53.1
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 1.4e-41 173.7 163 52.8
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 1.4e-41 173.7 197 47.7
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 1.8e-41 173.3 182 51.1
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 6.9e-41 171.4 185 50.3
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 4.5e-40 168.7 187 49.7
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 4.2e-38 162.2 154 52.6
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 1.0e-36 157.5 190 46.8
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 1.3e-36 157.1 175 49.7
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 3.9e-36 155.6 166 50.0
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 1.1e-35 154.1 209 43.1
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 6.3e-34 148.3 183 44.8
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 1.8e-33 146.7 169 46.2
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 3.3e-27 125.9 153 45.8
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.7e-26 123.6 179 38.5
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.4e-25 120.6 96 60.4
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 2.6e-24 116.3 184 36.4
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 1.4e-22 110.5 196 38.3
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 1.6e-21 107.1 244 31.6
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 2.1e-21 106.7 198 32.3
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 1.5e-16 90.5 56 66.1
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 1.7e-15 87.0 126 39.7
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 6.5e-15 85.1 198 32.8
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 3.3e-11 72.8 90 43.3
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 1.8e-09 67.0 102 43.1
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 6.5e-07 58.5 106 35.8
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 5.5e-06 55.5 100 39.0


User provided reference genes

Program Settings