Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G062 Amborella trichopoda HOM05D008003 ORTHO05D010079 3.3e-98 361.7 180 100.0
MBI16_g13167_MAGBIO Magnolia biondii HOM05D008003 ORTHO05D010079 5.7e-42 174.9 180 51.7
Thecc.08G020300 Theobroma cacao HOM05D008003 ORTHO05D010079 2.7e-39 166.0 180 50.0
Atru.chr13.573 Acer truncatum HOM05D008003 ORTHO05D010079 2.2e-38 162.9 185 48.1
Hma1.2p1_0260F.1_g104350 Hydrangea macrophylla HOM05D008003 ORTHO05D010079 5.0e-38 161.8 178 50.0
GSVIVG01009625001 Vitis vinifera HOM05D000499 ORTHO05D007471 5.0e-38 161.8 177 48.0
FvH4_2g26081 Fragaria vesca HOM05D008003 ORTHO05D010079 1.1e-37 160.6 181 50.8
Nn5g29446 Nelumbo nucifera HOM05D008003 ORTHO05D010079 1.1e-37 160.6 180 51.1
QL02p007150 Quercus lobata HOM05D008003 ORTHO05D010079 1.1e-37 160.6 182 48.4
Duzib116G0363 Durio zibethinus HOM05D008003 ORTHO05D010079 5.5e-37 158.3 178 49.4
Potri.002G131500 Populus trichocarpa HOM05D008003 ORTHO05D010079 5.5e-37 158.3 181 49.7
Nitab4.5_0003884g0080 Nicotiana tabacum HOM05D008003 ORTHO05D010079 7.2e-37 157.9 178 47.8
Ciclev10002654m.g Citrus clementina HOM05D008003 ORTHO05D010079 9.4e-37 157.5 179 48.6
DCAR_020952 Daucus carota HOM05D000499 ORTHO05D007471 9.4e-37 157.5 177 46.9
PSO170G4120 Papaver somniferum HOM05D008003 ORTHO05D010079 1.6e-36 156.8 184 46.2
CiPaw.16G052800 Carya illinoinensis HOM05D008003 ORTHO05D010079 2.1e-36 156.4 181 46.4
TPR.G12880 Trifolium pratense HOM05D008003 ORTHO05D010079 2.7e-36 156.0 181 47.5
Aqoxy5G01740 Aquilegia oxysepala HOM05D008003 ORTHO05D010079 3.6e-36 155.6 177 49.2
RcHm_v2.0_Chr6g0294451 Rosa chinensis HOM05D008003 ORTHO05D010079 3.6e-36 155.6 178 50.0
Cpa.g.sc64.35 Carica papaya HOM05D008003 ORTHO05D010079 4.7e-36 155.2 166 47.6
AUR62033864 Chenopodium quinoa HOM05D008003 ORTHO05D010079 1.0e-35 154.1 179 48.0
Gohir.D05G200500 Gossypium hirsutum HOM05D008003 ORTHO05D010079 1.0e-35 154.1 179 47.5
Gorai.009G205800 Gossypium raimondii HOM05D008003 ORTHO05D010079 1.0e-35 154.1 179 47.5
COL.COLO4_26389 Corchorus olitorius HOM05D000499 ORTHO05D007471 1.8e-35 153.3 165 49.1
Sabra02G0103400 Salix brachista HOM05D008003 ORTHO05D010079 1.8e-35 153.3 176 51.1
Cc10_g03530 Coffea canephora HOM05D000499 ORTHO05D007471 2.3e-35 152.9 177 48.0
Haze_17611 Corylus avellana HOM05D008003 ORTHO05D010079 3.0e-35 152.5 179 45.8
Oeu004673.1 Olea europaea HOM05D008003 ORTHO05D010079 6.8e-35 151.4 180 49.4
Cfa018459 Carpinus fangiana HOM05D008003 ORTHO05D010079 8.8e-35 151.0 180 45.6
MD11G1306400 Malus domestica HOM05D008003 ORTHO05D010079 8.8e-35 151.0 198 47.0
Prupe.8G265000 Prunus persica HOM05D008003 ORTHO05D010079 1.2e-34 150.6 195 47.2
Medtr8g106450 Medicago truncatula HOM05D008003 ORTHO05D010079 2.0e-34 149.8 181 45.9
Ca_17236_v3 Cicer arietinum L. HOM05D008003 ORTHO05D010079 4.4e-34 148.7 181 43.6
CSS0033209 Camellia sinensis var. sinensis HOM05D008003 ORTHO05D010079 7.5e-34 147.9 184 47.3
Manes.05G165700 Manihot esculenta HOM05D008003 ORTHO05D010079 9.8e-34 147.5 180 47.2
SGA_v2.0_scaffold33G13535 Striga asiatica HOM05D008003 ORTHO05D010079 1.3e-33 147.1 175 47.4
MD03G1292000 Malus domestica HOM05D008003 ORTHO05D010079 1.7e-33 146.7 198 46.0
Duzib116G0025 Durio zibethinus HOM05D008003 ORTHO05D010079 2.8e-33 146.0 172 48.3
CANSAT56G3107 Cannabis sativa HOM05D008003 ORTHO05D010079 6.3e-33 144.8 188 44.7
SalBow1G6207 Salvia bowleyana HOM05D008003 ORTHO05D010079 6.3e-33 144.8 177 48.0
PSO700G0197 Papaver somniferum HOM05D008003 ORTHO05D010079 8.3e-33 144.4 184 44.0
Sed0001684 Sechium edule HOM05D008003 ORTHO05D010079 1.8e-32 143.3 187 45.5
PGR031G0927 Punica granatum HOM05D008003 ORTHO05D010079 2.4e-32 142.9 181 48.1
Lalb_Chr14g0370901 Lupinus albus HOM05D008003 ORTHO05D010079 3.1e-32 142.5 180 41.7
Peaxi162Scf00337g00617 Petunia axillaris HOM05D008003 ORTHO05D010079 3.1e-32 142.5 170 47.1
Migut.N02677 Erythranthe guttata HOM05D000499 ORTHO05D007471 4.1e-32 142.1 185 44.3
HanXRQChr02g0045861 Helianthus annuus HOM05D008003 ORTHO05D010079 4.1e-32 142.1 176 46.6
SalBow1G7493 Salvia bowleyana HOM05D008003 ORTHO05D010079 4.1e-32 142.1 177 47.5
Lj2g0009988 Lotus japonicus HOM05D008003 ORTHO05D010079 5.4e-32 141.7 179 43.6
Carub.0008s0637 Capsella rubella HOM05D008003 ORTHO05D010079 1.6e-31 140.2 182 41.8
Nitab4.5_0012105g0050 Nicotiana tabacum HOM05D008003 ORTHO05D010079 1.6e-31 140.2 152 50.0
MELO3C012606.2 Cucumis melo HOM05D008003 ORTHO05D010079 2.0e-31 139.8 181 42.5
Glyma.05G242100 Glycine max HOM05D008003 ORTHO05D010079 2.0e-31 139.8 183 44.8
Lsat_1_v5_gn_1_19420 Lactuca sativa HOM05D008003 ORTHO05D010079 2.0e-31 139.8 178 44.9
AT5G42655 Arabidopsis thaliana HOM05D008003 ORTHO05D010079 3.5e-31 139.0 183 43.2
EL10As22g24222 Beta vulgaris HOM05D008003 ORTHO05D010079 4.5e-31 138.7 176 44.9
AUR62040074 Chenopodium quinoa HOM05D008003 ORTHO05D010079 4.5e-31 138.7 169 45.0
VMungo0251G2996 Vigna mungo HOM05D008003 ORTHO05D010079 2.3e-30 136.3 179 45.3
AL8G18550 Arabidopsis lyrata HOM05D008003 ORTHO05D010079 6.5e-30 134.8 183 42.6
Solyc04g008080.1 Solanum lycopersicum HOM05D008003 ORTHO05D010079 8.6e-30 134.4 184 42.4
CsaV3_7G022920 Cucumis sativus L. HOM05D007284 ORTHO05D009303 2.5e-29 132.9 153 45.1
Medtr8g106405 Medicago truncatula HOM05D008003 ORTHO05D010079 2.5e-29 132.9 140 47.1
TWI36G0609 Tripterygium wilfordii HOM05D008003 ORTHO05D010079 2.5e-29 132.9 183 45.4
Gohir.A05G197500 Gossypium hirsutum HOM05D008003 ORTHO05D010079 3.2e-29 132.5 134 49.3
CARHR181570 Cardamine hirsuta HOM05D000499 ORTHO05D007471 4.2e-29 132.1 182 43.4
THA.LOC104803393 Tarenaya hassleriana HOM05D008003 ORTHO05D010079 4.2e-29 132.1 169 44.4
CAN.G74.23 Capsicum annuum HOM05D008003 ORTHO05D010079 1.2e-28 130.6 182 42.3
BcaB07g30606 Brassica carinata HOM05D008003 ORTHO05D010079 2.1e-28 129.8 183 41.0
ECA247G3275 Erigeron canadensis HOM05D000264 ORTHO05D000152 4.7e-28 128.6 144 50.0
Phvul.002G325400 Phaseolus vulgaris HOM05D008003 ORTHO05D010079 1.4e-27 127.1 179 40.8
Thhalv10019186m.g Eutrema salsugineum HOM05D008003 ORTHO05D010079 6.8e-27 124.8 185 38.4
BcaC03g16515 Brassica carinata HOM05D008003 ORTHO05D010079 1.5e-26 123.6 187 39.0
C02p43340 Brassica napus HOM05D008003 ORTHO05D010079 1.5e-26 123.6 187 39.0
Phvul.002G325500 Phaseolus vulgaris HOM05D008003 ORTHO05D010079 2.6e-26 122.9 179 40.2
Sp2g07120 Schrenkiella parvula HOM05D008003 ORTHO05D010079 3.4e-26 122.5 191 39.3
A02p27430 Brassica napus HOM05D008003 ORTHO05D010079 5.7e-26 121.7 187 38.5
BraA02t07771Z Brassica rapa HOM05D008003 ORTHO05D010079 5.7e-26 121.7 187 38.5
BolC2t10386H Brassica oleracea HOM05D008003 ORTHO05D010079 7.5e-26 121.3 187 38.5
arahy.Tifrunner.gnm1.ann1.M7IFVU Arachis hypogaea HOM05D008003 ORTHO05D010079 2.8e-25 119.4 195 38.5
SEGI_14506 Sequoiadendron giganteum HOM05D008003 ORTHO05D010079 6.3e-25 118.2 200 40.5
PGSC0003DMG400029513 Solanum tuberosum HOM05D005814 ORTHO05D006821 2.7e-23 112.8 121 46.3
Thhalv10003357m.g Eutrema salsugineum HOM05D008003 ORTHO05D010079 4.3e-21 105.5 98 48.0
Ah.05g169480 Amaranthus hybridus HOM05D008003 ORTHO05D010079 9.8e-18 94.4 166 38.0
Zm00001eb056600 Zea mays HOM05D008003 ORTHO05D010079 8.6e-14 81.3 173 32.9
AUR62036507 Chenopodium quinoa HOM05D000013 ORTHO05D000011 7.5e-10 68.2 60 53.3
Psat7g197840 Pisum sativum HOM05D000180 ORTHO05D000099 7.8e-07 58.2 104 35.6
SEGI_27732 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 7.8e-07 58.2 113 32.7
Glyma.20G078800 Glycine max HOM05D000970 ORTHO05D000788 1.0e-06 57.8 151 26.5
Medtr1g046800 Medicago truncatula HOM05D000970 ORTHO05D000788 1.0e-06 57.8 151 27.8
Mapoly0009s0065 Marchantia polymorpha HOM05D000180 ORTHO05D000099 1.3e-06 57.4 156 30.1
Medtr1g046500 Medicago truncatula HOM05D000970 ORTHO05D000788 1.7e-06 57.0 151 27.2
Psat7g199960 Pisum sativum HOM05D000180 ORTHO05D000099 2.3e-06 56.6 114 34.2
Psat6g047440 Pisum sativum HOM05D000970 ORTHO05D000788 3.0e-06 56.2 151 27.2
Psat7g199920 Pisum sativum HOM05D000180 ORTHO05D000099 3.0e-06 56.2 114 34.2
QL07p024903 Quercus lobata HOM05D000180 ORTHO05D000099 3.0e-06 56.2 89 33.7
Lj6g0000538 Lotus japonicus HOM05D000970 ORTHO05D000788 3.9e-06 55.8 116 29.3
Mapoly0099s0036 Marchantia polymorpha HOM05D000180 ORTHO05D010079 3.9e-06 55.8 90 34.4
Medtr1g046490 Medicago truncatula HOM05D000970 ORTHO05D000788 3.9e-06 55.8 116 26.7
SalBow1G2902 Salvia bowleyana HOM05D000180 ORTHO05D000099 5.0e-06 55.5 114 30.7
Sed0015869 Sechium edule HOM05D000970 ORTHO05D000788 5.0e-06 55.5 150 28.0
TPR.G4612 Trifolium pratense HOM05D000180 ORTHO05D000099 5.0e-06 55.5 113 29.2
TPR.G4666 Trifolium pratense HOM05D000180 ORTHO05D000099 5.0e-06 55.5 96 36.5
VMungo0720G1262 Vigna mungo HOM05D000970 ORTHO05D000788 5.0e-06 55.5 150 26.7
Sed0023000 Sechium edule HOM05D000970 ORTHO05D000788 6.6e-06 55.1 150 28.0
TWI38G0273 Tripterygium wilfordii HOM05D000180 ORTHO05D000099 6.6e-06 55.1 96 31.2
TAR375G0523 Trochodendron aralioides HOM05D001508 ORTHO05D001381 6.6e-06 55.1 89 32.6
MSTRG.18525 Avicennia marina HOM05D000180 ORTHO05D000099 8.6e-06 54.7 88 34.1
Glyma.06G307300 Glycine max HOM05D000180 ORTHO05D000099 8.6e-06 54.7 95 34.7
Phvul.007G238200 Phaseolus vulgaris HOM05D000970 ORTHO05D000788 8.6e-06 54.7 148 27.7
TPR.G11283 Trifolium pratense HOM05D000970 ORTHO05D000788 8.6e-06 54.7 116 26.7


User provided reference genes

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