Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 3.3e-225 785.0 499 100.0
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 7.1e-151 538.1 419 69.5
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 6.7e-149 531.6 406 69.7
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 9.6e-148 527.7 409 68.7
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 2.4e-146 523.1 409 67.2
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 3.1e-146 522.7 406 69.5
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 2.0e-145 520.0 409 66.7
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.0e-144 517.7 409 68.0
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 6.5e-144 515.0 409 66.0
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 6.5e-144 515.0 409 66.0
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 5.5e-143 511.9 409 67.0
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 9.3e-143 511.1 409 66.3
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.3e-141 507.3 409 66.3
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 3.0e-141 506.1 409 66.7
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 5.1e-141 505.4 409 64.8
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 2.5e-140 503.1 409 66.3
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 9.6e-140 501.1 409 65.5
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 9.6e-140 501.1 402 65.9
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 1.4e-138 497.3 399 65.7
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 2.4e-138 496.5 409 66.0
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 4.1e-138 495.7 423 62.9
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 4.1e-138 495.7 408 65.9
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 4.5e-137 492.3 409 65.3
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 1.7e-136 490.3 406 64.0
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.2e-136 490.0 409 64.5
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 8.4e-136 488.0 398 65.8
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 2.1e-134 483.4 409 63.6
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 1.8e-133 480.3 405 63.0
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 3.9e-133 479.2 435 60.9
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 5.1e-133 478.8 409 61.4
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.9e-132 476.9 406 63.5
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 4.3e-132 475.7 399 64.2
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 9.7e-132 474.6 409 60.9
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 9.7e-132 474.6 399 63.9
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.3e-131 474.2 414 60.9
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 2.2e-131 473.4 411 62.5
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 1.1e-130 471.1 410 62.7
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 1.1e-130 471.1 406 63.5
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 2.4e-130 469.9 408 62.0
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 9.0e-130 468.0 409 61.4
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 9.0e-130 468.0 406 62.8
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 1.2e-129 467.6 475 55.6
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 1.2e-129 467.6 409 61.4
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 1.5e-129 467.2 409 61.6
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 2.6e-129 466.5 410 62.2
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 2.6e-129 466.5 404 61.6
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 2.6e-129 466.5 409 59.7
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 2.6e-129 466.5 412 61.4
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.0e-128 464.5 436 60.6
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.0e-128 464.5 440 60.2
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 1.7e-128 463.8 409 61.1
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 2.2e-128 463.4 408 61.8
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 2.2e-128 463.4 408 61.3
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 2.9e-128 463.0 409 60.6
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 8.5e-128 461.5 406 62.1
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 8.5e-128 461.5 409 60.6
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 1.1e-127 461.1 408 60.5
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 1.4e-127 460.7 408 58.6
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 4.2e-127 459.1 409 60.1
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 4.2e-127 459.1 410 61.0
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 9.4e-127 458.0 407 58.7
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 9.4e-127 458.0 409 60.9
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 7.9e-126 454.9 409 61.9
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.0e-125 454.5 410 62.7
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 1.0e-125 454.5 409 59.2
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.4e-125 454.1 410 60.2
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 5.1e-125 452.2 410 61.0
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 5.1e-125 452.2 406 59.9
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.0e-124 450.3 410 60.0
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 4.3e-124 449.1 411 59.9
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 5.7e-124 448.7 388 62.9
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 3.1e-122 443.0 407 62.4
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.0e-120 438.0 410 59.3
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.3e-120 437.6 410 59.0
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 2.2e-120 436.8 404 60.4
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 3.8e-120 436.0 412 59.0
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 1.1e-119 434.5 409 58.7
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 1.4e-119 434.1 409 58.7
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 7.2e-119 431.8 378 61.4
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 2.1e-118 430.3 410 58.8
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 6.1e-118 428.7 405 58.8
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 1.0e-117 427.9 410 58.5
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 1.0e-117 427.9 410 58.5
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 1.0e-117 427.9 409 57.5
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 1.8e-117 427.2 420 57.9
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 5.1e-117 425.6 409 57.2
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 5.1e-117 425.6 424 57.5
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 8.8e-117 424.9 411 56.9
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 1.1e-116 424.5 410 58.0
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 2.0e-116 423.7 404 57.4
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.6e-116 423.3 413 58.6
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 2.2e-115 420.2 409 57.5
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 8.2e-115 418.3 410 57.1
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 1.1e-114 417.9 362 63.3
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 1.8e-114 417.2 388 58.0
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 4.1e-114 416.0 430 55.8
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 9.1e-114 414.8 288 74.0
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 1.2e-113 414.5 433 55.0
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 3.5e-113 412.9 409 56.7
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 1.3e-112 411.0 388 59.3
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 2.2e-112 410.2 420 55.7
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 2.2e-112 410.2 420 55.7
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 2.2e-112 410.2 426 55.2
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 2.9e-112 409.8 409 56.2
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 4.2e-111 406.0 424 54.5
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 6.1e-110 402.1 391 57.5
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 1.4e-109 401.0 404 55.7
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 5.7e-108 395.6 405 56.5
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.4e-106 391.0 316 65.5
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 2.9e-104 383.3 418 51.4
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 2.3e-101 373.6 304 65.5
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 1.7e-99 367.5 408 52.5
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 2.8e-99 366.7 358 57.0
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 4.5e-97 359.4 417 48.7
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 2.2e-91 340.5 438 47.3
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 3.1e-90 336.7 409 46.0
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 2.8e-86 323.6 269 63.9
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 4.6e-81 306.2 414 45.9
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 5.9e-81 305.8 278 60.8
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 7.8e-81 305.4 278 60.8
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 9.2e-74 282.0 248 61.3
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 4.0e-69 266.5 209 66.5
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 5.4e-66 256.1 299 50.5
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 3.0e-64 250.4 229 60.3
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 3.4e-60 236.9 516 37.8
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 7.1e-58 229.2 273 51.6
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 1.0e-48 198.7 262 50.0
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 1.1e-47 195.3 174 59.8
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 6.9e-45 186.0 117 79.5
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 9.0e-45 185.7 150 64.7
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 3.4e-36 157.1 143 61.5
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 4.5e-36 156.8 136 60.3
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 3.9e-32 143.7 160 50.0
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 6.5e-27 126.3 116 59.5
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 3.2e-26 124.0 89 69.7
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 6.0e-25 119.8 103 64.1
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 6.0e-25 119.8 103 64.1
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 9.6e-23 112.5 127 52.8
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.4e-21 108.6 105 55.2
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.6e-17 95.1 76 64.5
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 7.9e-17 92.8 151 39.1
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 3.0e-16 90.9 54 79.6
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 8.7e-16 89.4 108 51.9
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 4.5e-12 77.0 109 43.1
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 2.9e-11 74.3 51 62.7
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 5.0e-11 73.6 66 62.1
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.3e-08 64.7 154 35.1
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 4.4e-07 60.5 178 31.5
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 9.7e-07 59.3 71 49.3
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 8.2e-06 56.2 83 41.0


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