Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 5.3e-45 184.5 132 100.0
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 2.1e-25 119.4 125 78.4
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 2.1e-25 119.4 125 77.6
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 4.7e-25 118.2 132 73.5
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 4.7e-25 118.2 132 73.5
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 7.9e-25 117.5 132 75.8
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 7.9e-25 117.5 129 71.3
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.8e-24 116.3 125 76.8
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 2.3e-24 115.9 132 75.0
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 3.0e-24 115.5 123 77.2
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 3.9e-24 115.2 125 75.2
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 5.1e-24 114.8 122 77.9
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 5.1e-24 114.8 117 79.5
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 8.8e-24 114.0 132 74.2
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 8.8e-24 114.0 122 77.9
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 8.8e-24 114.0 132 74.2
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 1.1e-23 113.6 122 77.9
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 1.1e-23 113.6 126 73.8
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.5e-23 113.2 132 72.7
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.5e-23 113.2 122 77.9
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 2.0e-23 112.8 125 72.8
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 2.0e-23 112.8 117 80.3
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 2.6e-23 112.5 125 73.6
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 2.6e-23 112.5 125 75.2
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 3.3e-23 112.1 117 78.6
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 3.3e-23 112.1 125 73.6
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 4.4e-23 111.7 125 72.8
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 5.7e-23 111.3 125 75.2
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 5.7e-23 111.3 125 75.2
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 5.7e-23 111.3 119 77.3
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 5.7e-23 111.3 132 72.7
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 5.7e-23 111.3 131 71.8
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 7.4e-23 110.9 117 78.6
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 7.4e-23 110.9 117 78.6
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 9.7e-23 110.5 132 72.7
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 1.7e-22 109.8 131 70.2
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.7e-22 109.8 132 72.0
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 1.7e-22 109.8 117 78.6
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 1.7e-22 109.8 126 72.2
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 2.2e-22 109.4 132 72.0
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 2.2e-22 109.4 110 81.8
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 2.8e-22 109.0 113 77.9
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 2.8e-22 109.0 113 77.9
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 3.7e-22 108.6 117 77.8
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 3.7e-22 108.6 117 76.1
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 3.7e-22 108.6 117 78.6
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 4.8e-22 108.2 125 72.8
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 4.8e-22 108.2 113 81.4
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 4.8e-22 108.2 113 81.4
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 4.8e-22 108.2 129 72.1
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 4.8e-22 108.2 113 81.4
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 6.3e-22 107.8 125 74.4
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 6.3e-22 107.8 125 73.6
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 6.3e-22 107.8 131 71.8
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 6.3e-22 107.8 125 74.4
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 6.3e-22 107.8 113 77.0
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 8.2e-22 107.5 132 69.7
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 8.2e-22 107.5 132 70.5
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 8.2e-22 107.5 113 80.5
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 2.4e-21 105.9 125 72.0
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 3.1e-21 105.5 132 71.2
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 3.1e-21 105.5 119 78.2
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 3.1e-21 105.5 127 73.2
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 4.1e-21 105.1 125 71.2
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 5.3e-21 104.8 132 70.5
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 5.3e-21 104.8 134 72.4
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 5.3e-21 104.8 123 72.4
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 5.3e-21 104.8 117 76.1
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 9.1e-21 104.0 117 75.2
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.2e-20 103.6 129 69.8
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 1.5e-20 103.2 130 70.8
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 2.0e-20 102.8 122 73.0
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 4.5e-20 101.7 125 52.8
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 4.5e-20 101.7 129 70.5
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 7.7e-20 100.9 125 69.6
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 7.7e-20 100.9 115 74.8
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 7.7e-20 100.9 117 74.4
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.2e-19 99.4 109 74.3
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.9e-19 99.0 123 70.7
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 1.4e-18 96.7 117 72.6
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 2.5e-18 95.9 115 74.8
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 2.1e-17 92.8 116 69.8
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 3.6e-17 92.0 130 53.8
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 3.6e-17 92.0 132 40.9
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 4.7e-17 91.7 110 76.4
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 4.7e-17 91.7 130 66.2
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 3.9e-16 88.6 113 58.4
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 6.7e-16 87.8 126 64.3
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 4.4e-15 85.1 107 74.8
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 4.4e-15 85.1 62 61.3
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.3e-14 83.6 68 61.8
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.3e-14 83.6 61 67.2
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 6.3e-14 81.3 117 70.1
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.4e-13 79.3 52 71.2
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 5.0e-11 71.6 99 39.4
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 5.0e-11 71.6 89 64.0
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 4.2e-10 68.6 109 63.3
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 2.7e-09 65.9 109 67.0
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 2.3e-08 62.8 56 58.9
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.6e-07 59.3 117 35.0
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 2.8e-06 55.8 51 58.8


User provided reference genes

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