Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 0.0e+00 1127.1 545 100.0
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 2.2e-214 749.2 530 65.3
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 1.4e-213 746.5 530 65.1
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 7.4e-210 734.2 516 65.1
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 8.2e-209 730.7 516 64.5
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 1.4e-208 729.9 522 65.1
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.8e-208 729.6 516 65.1
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 2.6e-207 725.7 525 64.0
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 3.4e-207 725.3 520 65.2
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 7.6e-207 724.2 527 63.9
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 1.7e-206 723.0 524 64.3
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 2.9e-206 722.2 518 64.1
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 2.9e-206 722.2 517 64.6
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 3.8e-206 721.8 525 63.4
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 5.0e-206 721.5 518 64.5
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 8.5e-206 720.7 526 63.7
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 1.1e-205 720.3 526 63.9
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 1.6e-204 716.5 519 63.8
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 2.7e-204 715.7 522 63.8
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 3.6e-204 715.3 523 62.9
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 3.6e-204 715.3 524 63.7
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 1.3e-203 713.4 525 62.9
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 3.9e-203 711.8 528 63.3
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 3.9e-203 711.8 525 62.3
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.1e-202 710.3 526 63.5
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 3.3e-202 708.8 519 64.0
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 5.7e-202 708.0 521 63.5
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 5.7e-202 708.0 518 62.7
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 5.7e-202 708.0 528 62.9
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 9.7e-202 707.2 522 62.6
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 1.7e-201 706.4 528 63.3
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 3.7e-201 705.3 520 62.3
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 1.1e-200 703.7 520 62.7
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 1.4e-200 703.4 518 61.6
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 2.4e-200 702.6 520 63.8
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 6.9e-200 701.0 527 62.6
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 9.1e-200 700.7 469 67.0
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 1.2e-199 700.3 527 62.4
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 1.5e-199 699.9 526 62.2
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 7.7e-199 697.6 548 60.9
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 1.0e-198 697.2 520 62.9
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 1.3e-198 696.8 522 62.8
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 1.7e-198 696.4 582 58.2
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 3.8e-198 695.3 527 61.5
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 5.0e-198 694.9 519 62.6
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 6.5e-198 694.5 527 61.5
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 1.9e-197 693.0 518 62.9
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 2.5e-197 692.6 518 61.2
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 4.2e-197 691.8 525 61.0
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 5.5e-197 691.4 520 62.3
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 7.2e-197 691.0 524 61.6
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 7.2e-197 691.0 522 62.3
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 2.7e-196 689.1 471 65.0
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 6.1e-196 688.0 471 66.5
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 7.9e-196 687.6 478 65.5
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 1.0e-195 687.2 524 61.6
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 1.4e-195 686.8 522 62.3
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 5.1e-195 684.9 520 61.5
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 6.7e-195 684.5 522 61.3
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 6.7e-195 684.5 527 60.0
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 8.8e-195 684.1 520 61.9
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 1.1e-194 683.7 541 60.6
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 2.0e-194 682.9 525 60.2
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 2.6e-194 682.6 520 61.3
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 4.4e-194 681.8 521 61.0
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 4.4e-194 681.8 521 61.0
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 5.7e-194 681.4 541 60.3
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 4.8e-193 678.3 521 61.4
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 8.2e-193 677.6 538 60.8
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 1.8e-192 676.4 522 61.3
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 3.1e-192 675.6 522 61.3
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 3.1e-192 675.6 519 61.7
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 4.1e-192 675.2 518 61.2
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 1.7e-190 669.8 547 59.2
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 6.5e-190 667.9 565 57.7
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 3.6e-188 662.1 518 61.4
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 1.2e-183 647.1 515 59.6
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 2.0e-183 646.4 439 67.7
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 2.6e-183 646.0 563 56.5
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 1.1e-181 640.6 525 58.5
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 6.1e-180 634.8 523 59.1
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 3.0e-179 632.5 527 58.6
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.4e-176 623.6 517 58.2
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 2.4e-176 622.9 519 58.0
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 4.5e-175 618.6 698 46.1
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 7.7e-175 617.8 440 64.3
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 4.7e-172 608.6 554 55.6
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 1.5e-170 603.6 530 54.2
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 2.8e-169 599.4 420 64.3
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 2.5e-165 586.3 478 59.4
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 4.2e-165 585.5 399 65.9
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 7.2e-165 584.7 526 55.5
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 1.6e-164 583.6 501 57.5
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 6.1e-164 581.6 593 50.8
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 8.9e-163 577.8 393 65.1
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 7.5e-162 574.7 579 51.3
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 1.3e-161 573.9 528 53.2
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 3.6e-156 555.8 504 54.2
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 9.2e-152 541.2 517 52.2
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 2.7e-151 539.7 495 55.4
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 1.3e-137 494.2 563 44.8
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 7.8e-135 485.0 365 61.1
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 3.9e-134 482.6 453 51.7
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 5.8e-130 468.8 332 63.9
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.5e-122 444.1 306 65.0
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.0e-122 443.7 526 46.2
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 9.9e-122 441.4 346 61.3
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 1.3e-121 441.0 518 45.8
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 3.9e-118 429.5 283 68.2
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 6.6e-118 428.7 363 57.6
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 7.4e-109 398.7 343 54.8
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.5e-101 374.4 252 65.1
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 1.7e-97 360.9 286 58.7
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 4.2e-96 356.3 229 70.3
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 5.7e-93 345.9 229 67.7
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 5.7e-93 345.9 229 67.7
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 2.8e-92 343.6 230 64.8
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 7.2e-72 275.8 539 32.8
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 6.1e-71 272.7 507 34.9
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 3.7e-68 263.5 482 35.9
GSVIVG01007210001 Vitis vinifera HOM05D004979 ORTHO05D006190 8.2e-68 262.3 211 60.2
GSVIVG01007430001 Vitis vinifera HOM05D004979 ORTHO05D006190 4.5e-66 256.5 210 60.0
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 1.7e-65 254.6 526 32.3
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 1.9e-64 251.1 165 66.1
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 7.2e-64 249.2 516 32.2
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 1.1e-59 235.3 224 53.6
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 1.9e-56 224.6 169 58.6
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 5.7e-53 213.0 366 38.3
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 1.3e-52 211.8 193 52.8
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 4.1e-43 180.3 251 40.2
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 7.8e-34 149.4 337 32.3
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 1.0e-33 149.1 85 74.1
ClCG03G002030 Citrullus lanatus HOM05D004979 ORTHO05D006190 8.6e-33 146.0 163 51.5
GSVIVG01004371001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.6e-31 141.7 103 68.9
CDE04G1277 Ceratophyllum demersum HOM05D004979 ORTHO05D006190 1.1e-30 139.0 99 67.7
MBI07_g39750_MAGBIO Magnolia biondii HOM05D004979 ORTHO05D006190 7.8e-26 122.9 109 55.0
Lsat_1_v5_gn_8_74741 Lactuca sativa HOM05D004979 ORTHO05D006190 2.5e-24 117.9 105 55.2
Actinidia27722 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.2e-23 115.5 193 35.8
FAN19G1386 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.0e-22 110.5 85 58.8
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 5.8e-21 106.7 121 43.8
QL03p011256 Quercus lobata HOM05D004979 ORTHO05D006190 1.3e-20 105.5 79 64.6
AagrBONN_evm.TU.Sc2ySwM_117.715 Anthoceros agrestis HOM05D004979 ORTHO05D006190 1.8e-14 85.1 97 46.4
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 3.1e-14 84.3 217 30.4
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 1.3e-12 79.0 41 68.3
SHI20227 Sapria himalayana HOM05D004979 ORTHO05D006190 1.1e-11 75.9 51 64.7
CBR_g72775 Chara braunii HOM05D004979 ORTHO05D132771 6.9e-06 56.6 218 27.1


User provided reference genes

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