Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 8.4e-171 603.6 303 100.0
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 7.3e-82 308.1 242 64.0
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 1.1e-80 304.3 222 66.2
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 8.9e-80 301.2 251 57.8
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 1.2e-79 300.8 260 61.2
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 1.5e-79 300.4 226 65.9
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 2.6e-79 299.7 260 61.9
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 2.6e-79 299.7 251 57.4
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 3.4e-79 299.3 259 60.2
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 5.8e-79 298.5 257 59.9
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 5.8e-79 298.5 227 63.9
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 7.5e-79 298.1 233 63.9
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 1.3e-78 297.4 226 65.5
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 1.3e-78 297.4 260 61.9
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.7e-78 297.0 259 58.7
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 2.9e-78 296.2 255 60.0
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 2.9e-78 296.2 260 61.2
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.9e-78 296.2 226 65.5
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 2.9e-78 296.2 226 64.6
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 3.7e-78 295.8 248 62.1
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 6.4e-78 295.0 211 65.9
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 6.4e-78 295.0 265 57.7
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 6.4e-78 295.0 226 63.7
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 8.3e-78 294.7 260 61.2
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 1.1e-77 294.3 258 60.9
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 1.4e-77 293.9 206 70.9
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 1.9e-77 293.5 226 63.7
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 2.4e-77 293.1 226 63.3
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 3.2e-77 292.7 252 57.1
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 3.2e-77 292.7 255 60.0
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 3.2e-77 292.7 224 62.9
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 4.1e-77 292.4 248 60.9
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 5.4e-77 292.0 228 62.7
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 7.0e-77 291.6 252 59.9
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 9.2e-77 291.2 209 67.9
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 9.2e-77 291.2 255 61.2
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 9.2e-77 291.2 255 61.2
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 1.2e-76 290.8 249 57.8
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 1.6e-76 290.4 224 62.5
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 2.0e-76 290.0 217 66.8
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 2.7e-76 289.7 263 58.9
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 2.7e-76 289.7 259 60.2
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 2.7e-76 289.7 228 60.5
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 4.6e-76 288.9 254 60.2
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 4.6e-76 288.9 227 62.1
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 6.0e-76 288.5 258 59.3
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 6.0e-76 288.5 208 68.8
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 7.8e-76 288.1 224 62.9
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 1.0e-75 287.7 261 56.3
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.0e-75 287.7 233 62.7
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 1.0e-75 287.7 217 66.4
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 1.3e-75 287.3 207 66.7
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 1.3e-75 287.3 215 66.0
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.3e-75 286.6 243 58.8
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 3.9e-75 285.8 223 60.5
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 3.9e-75 285.8 261 56.7
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 5.0e-75 285.4 225 64.0
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 5.0e-75 285.4 203 68.5
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 6.6e-75 285.0 241 56.8
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 6.6e-75 285.0 217 65.9
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 8.6e-75 284.6 210 65.2
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 8.6e-75 284.6 207 66.7
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 1.9e-74 283.5 252 57.1
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 1.9e-74 283.5 223 62.3
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 2.5e-74 283.1 210 64.3
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 2.5e-74 283.1 216 63.0
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 2.5e-74 283.1 206 67.5
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 3.3e-74 282.7 229 60.3
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 4.3e-74 282.3 212 65.1
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 4.3e-74 282.3 252 57.1
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 7.3e-74 281.6 241 56.4
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 9.5e-74 281.2 203 66.5
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.2e-73 280.8 207 66.2
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.2e-73 280.8 265 54.7
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 1.2e-73 280.8 224 59.8
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.6e-73 280.4 249 55.0
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 1.6e-73 280.4 210 62.9
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 2.1e-73 280.0 210 64.3
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 2.1e-73 280.0 227 59.5
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 2.8e-73 279.6 211 61.1
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 2.8e-73 279.6 199 68.3
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 3.6e-73 279.3 211 61.1
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 3.6e-73 279.3 206 66.0
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 3.6e-73 279.3 210 63.8
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 3.6e-73 279.3 211 62.6
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 4.7e-73 278.9 232 59.5
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 8.1e-73 278.1 226 59.3
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 8.1e-73 278.1 263 54.4
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 1.1e-72 277.7 210 63.8
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 1.8e-72 276.9 202 67.3
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 1.8e-72 276.9 211 64.0
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 2.3e-72 276.6 215 63.3
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.3e-72 276.6 238 58.4
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 6.8e-72 275.0 210 62.9
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 8.9e-72 274.6 224 61.6
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 1.5e-71 273.9 212 60.4
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 2.0e-71 273.5 210 62.4
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 4.4e-71 272.3 223 60.1
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 2.9e-70 269.6 210 61.9
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 4.9e-70 268.9 209 61.2
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.4e-69 267.3 207 62.8
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 7.1e-69 265.0 206 64.1
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 2.3e-67 260.0 236 56.8
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 2.3e-67 260.0 212 59.0
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 1.9e-66 256.9 222 55.4
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 3.6e-65 252.7 218 58.3
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 8.1e-65 251.5 207 57.0
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.4e-64 250.8 196 62.8
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 2.4e-64 250.0 210 59.0
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 7.6e-63 245.0 207 59.4
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.7e-62 243.8 207 58.9
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.9e-62 243.0 181 64.6
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 3.2e-61 239.6 258 49.2
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 7.1e-61 238.4 197 59.9
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 1.6e-60 237.3 212 56.6
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 1.6e-57 227.3 208 54.3
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 1.6e-57 227.3 210 58.1
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 1.0e-51 208.0 227 48.9
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 1.0e-51 208.0 211 53.6
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 2.3e-51 206.8 192 57.3
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 2.5e-50 203.4 219 47.0
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 3.6e-49 199.5 182 58.2
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 9.3e-45 184.9 232 38.8
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 2.5e-42 176.8 154 61.0
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 1.3e-41 174.5 135 65.2
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 2.8e-41 173.3 216 43.5
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 3.7e-41 172.9 136 61.0
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 3.8e-38 162.9 120 63.3
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 2.4e-37 160.2 109 69.7
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 1.5e-26 124.4 125 56.0
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 9.7e-26 121.7 127 55.9
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 3.8e-22 109.8 131 46.6
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 1.1e-21 108.2 147 39.5
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 2.5e-18 97.1 83 61.4
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 4.8e-17 92.8 86 50.0
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 2.2e-14 84.0 96 49.0
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 3.0e-11 73.6 50 68.0
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 8.8e-11 72.0 224 32.1
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 2.4e-08 63.9 44 68.2


User provided reference genes

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