Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 6.3e-188 660.6 329 100.0
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 7.5e-125 451.1 318 73.9
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 2.5e-120 436.0 315 71.1
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 2.5e-120 436.0 316 71.5
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 8.1e-119 431.0 316 69.6
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.1e-118 430.6 318 69.5
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 3.1e-118 429.1 314 69.7
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 5.2e-118 428.3 319 70.5
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 6.8e-118 427.9 318 69.2
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 8.9e-118 427.6 318 69.2
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 2.6e-117 426.0 319 69.9
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 5.8e-117 424.9 317 67.5
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 7.6e-117 424.5 320 68.8
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 2.9e-116 422.5 321 69.5
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 2.9e-116 422.5 321 68.2
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 3.8e-116 422.2 318 68.2
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 4.9e-116 421.8 327 67.3
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 8.4e-116 421.0 320 69.4
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.1e-115 420.6 314 69.7
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.1e-115 420.6 318 67.9
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.9e-115 419.9 332 68.4
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 3.2e-115 419.1 316 70.3
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 3.2e-115 419.1 325 67.7
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.6e-114 416.8 319 67.7
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.6e-114 416.8 319 68.0
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.9e-113 412.1 316 67.7
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.9e-113 412.1 319 67.1
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 6.6e-113 411.4 316 67.4
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.1e-112 410.6 325 65.2
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 1.1e-112 410.6 326 65.6
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 1.9e-112 409.8 315 67.3
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 3.3e-112 409.1 325 64.6
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.3e-112 408.7 317 66.9
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 5.6e-112 408.3 323 65.3
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 7.3e-112 407.9 319 66.5
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 1.6e-111 406.8 325 65.8
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 2.8e-111 406.0 321 66.4
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 4.7e-111 405.2 319 66.8
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 6.2e-111 404.8 323 65.9
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 8.1e-111 404.4 315 66.0
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 1.1e-110 404.1 327 63.9
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 1.1e-110 404.1 311 67.8
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 1.4e-110 403.7 318 65.4
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 2.4e-110 402.9 327 63.6
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 3.1e-110 402.5 325 63.7
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 5.2e-110 401.7 315 67.6
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 9.0e-110 401.0 318 65.7
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.5e-109 400.2 328 63.1
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 2.6e-109 399.4 321 66.0
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 3.4e-109 399.1 320 66.6
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 4.4e-109 398.7 311 66.9
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 4.4e-109 398.7 316 66.8
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 5.8e-109 398.3 313 64.9
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 7.6e-109 397.9 325 64.3
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 1.7e-108 396.7 325 63.4
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 1.7e-108 396.7 325 63.4
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 1.7e-108 396.7 329 64.4
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 2.2e-108 396.4 315 66.0
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 2.9e-108 396.0 325 63.4
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 2.9e-108 396.0 315 66.0
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 4.9e-108 395.2 326 63.8
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 4.9e-108 395.2 318 65.4
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 4.9e-108 395.2 320 64.1
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 8.4e-108 394.4 315 66.7
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 1.9e-107 393.3 325 63.1
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 2.4e-107 392.9 325 63.1
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 7.1e-107 391.3 330 63.6
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 1.2e-106 390.6 316 65.2
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.6e-106 390.2 320 64.4
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 2.1e-106 389.8 314 65.3
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 6.0e-106 388.3 331 64.4
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 2.3e-105 386.3 314 64.3
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 3.3e-104 382.5 315 65.1
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 5.6e-104 381.7 328 63.7
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 7.3e-104 381.3 329 62.0
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.3e-103 380.6 321 64.5
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.0e-102 374.4 272 70.2
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.5e-101 373.6 316 64.2
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 4.9e-100 368.6 305 64.9
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 2.7e-98 362.8 274 68.6
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.1e-96 357.5 315 61.3
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.5e-96 357.1 315 60.3
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 7.4e-96 354.8 317 63.4
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 3.7e-95 352.4 269 68.8
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 5.8e-93 345.1 313 59.7
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 1.2e-90 337.4 372 52.7
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 7.9e-90 334.7 315 56.2
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 1.5e-88 330.5 322 55.9
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 1.4e-86 323.9 347 56.2
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.0e-84 317.8 371 49.6
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 1.3e-84 317.4 315 53.7
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 4.9e-84 315.5 341 52.5
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 7.1e-83 311.6 318 55.7
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 1.2e-82 310.8 319 53.9
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.9e-80 303.5 212 74.5
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 3.9e-73 279.3 294 51.7
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 2.3e-65 253.4 224 60.7
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 3.6e-58 229.6 353 41.1
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.7e-52 210.7 271 48.7
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 7.2e-51 205.3 306 41.5
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.0e-44 184.9 187 54.5
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.2e-42 177.9 119 68.1
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.6e-40 170.2 182 54.9
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 2.2e-39 167.2 164 55.5
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.8e-38 164.1 110 72.7
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.1e-35 154.8 97 77.3
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 8.6e-20 102.1 225 34.7
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 5.6e-11 72.8 74 50.0
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 1.8e-09 67.8 51 56.9
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 5.2e-09 66.2 51 58.8
Ah.10g037120 Amaranthus hybridus HOM05D001947 ORTHO05D002440 3.2e-06 57.0 150 30.0


User provided reference genes

Program Settings