Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0730G060 Amborella trichopoda HOM05D003976 ORTHO05D004711 3.7e-91 338.2 170 100.0
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 8.8e-61 237.3 139 84.2
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 2.0e-60 236.1 139 84.9
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 2.0e-60 236.1 139 85.6
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 2.8e-59 232.3 139 82.0
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 1.1e-58 230.3 139 81.3
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 1.8e-58 229.6 139 82.7
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 7.0e-58 227.6 139 79.9
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 9.2e-58 227.3 139 80.6
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 1.2e-57 226.9 139 79.1
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.6e-57 226.5 130 83.8
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 2.0e-57 226.1 139 79.1
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 2.0e-57 226.1 130 83.8
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 2.0e-57 226.1 129 86.0
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 2.7e-57 225.7 139 79.9
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 2.7e-57 225.7 130 85.4
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 3.5e-57 225.3 139 79.9
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 5.9e-57 224.6 139 79.9
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 7.7e-57 224.2 130 83.1
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 7.7e-57 224.2 130 83.8
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 1.0e-56 223.8 130 83.1
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.0e-56 223.8 130 83.1
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.0e-56 223.8 130 83.1
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 1.0e-56 223.8 139 79.9
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 1.0e-56 223.8 139 79.9
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 1.3e-56 223.4 139 79.9
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 1.3e-56 223.4 139 79.1
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.3e-56 223.4 130 82.3
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 1.7e-56 223.0 131 83.2
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 1.7e-56 223.0 133 82.7
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 1.7e-56 223.0 139 78.4
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.3e-56 222.6 130 82.3
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 2.3e-56 222.6 139 78.4
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 2.3e-56 222.6 139 79.1
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 2.3e-56 222.6 139 78.4
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 3.8e-56 221.9 139 75.5
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 3.8e-56 221.9 135 79.3
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 3.8e-56 221.9 131 81.7
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 3.8e-56 221.9 130 83.1
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 5.0e-56 221.5 130 83.1
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 5.0e-56 221.5 130 83.8
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 5.0e-56 221.5 133 81.2
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 6.6e-56 221.1 133 82.0
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 1.5e-55 219.9 130 81.5
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 1.9e-55 219.5 130 83.1
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 2.5e-55 219.2 129 82.9
CAN.G321.62 Capsicum annuum HOM05D003976 ORTHO05D004711 2.5e-55 219.2 130 81.5
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 2.5e-55 219.2 130 83.1
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 2.5e-55 219.2 130 81.5
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 2.5e-55 219.2 130 82.3
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 2.5e-55 219.2 133 81.2
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 3.3e-55 218.8 139 77.7
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 3.3e-55 218.8 130 81.5
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 3.3e-55 218.8 130 81.5
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 3.3e-55 218.8 130 81.5
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 3.3e-55 218.8 130 81.5
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 3.3e-55 218.8 130 81.5
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 3.3e-55 218.8 130 81.5
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 4.3e-55 218.4 130 82.3
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 5.6e-55 218.0 130 80.8
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 7.3e-55 217.6 139 77.0
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 7.3e-55 217.6 139 75.5
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 9.5e-55 217.2 133 80.5
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 9.5e-55 217.2 130 80.0
CiPaw.02G172100 Carya illinoinensis HOM05D003976 ORTHO05D004711 1.2e-54 216.9 130 81.5
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 1.2e-54 216.9 130 80.8
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 1.2e-54 216.9 130 80.0
COL.COLO4_34215 Corchorus olitorius HOM05D003976 ORTHO05D004711 1.6e-54 216.5 130 80.8
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 1.6e-54 216.5 133 79.7
HPP92_026132 Vanilla planifolia HOM05D003976 ORTHO05D004711 2.1e-54 216.1 130 79.2
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 2.8e-54 215.7 133 77.4
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 2.8e-54 215.7 133 77.4
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 4.7e-54 214.9 139 75.5
Peaxi162Scf00145g01214 Petunia axillaris HOM05D003976 ORTHO05D004711 4.7e-54 214.9 130 80.0
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 6.1e-54 214.5 130 80.0
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 1.0e-53 213.8 133 78.2
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 1.8e-53 213.0 139 74.8
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 3.0e-53 212.2 133 78.2
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 3.0e-53 212.2 130 78.5
VMungo0720G2709 Vigna mungo HOM05D003976 ORTHO05D004711 4.0e-53 211.8 131 77.1
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 5.2e-53 211.5 132 78.0
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 5.2e-53 211.5 139 74.1
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 6.8e-53 211.1 139 74.1
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 6.8e-53 211.1 139 74.1
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 6.8e-53 211.1 130 77.7
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea HOM05D003976 ORTHO05D004711 8.9e-53 210.7 130 79.2
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 1.5e-52 209.9 130 76.9
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 2.6e-52 209.1 130 76.9
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 3.4e-52 208.8 130 78.5
BcaNung07314 Brassica carinata HOM05D003976 ORTHO05D004711 3.4e-52 208.8 130 76.9
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 3.4e-52 208.8 139 74.1
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 3.4e-52 208.8 139 72.7
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 5.7e-52 208.0 130 78.5
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 7.5e-52 207.6 139 72.7
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 7.5e-52 207.6 139 72.7
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 9.8e-52 207.2 130 74.6
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 1.3e-51 206.8 139 71.9
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 1.3e-51 206.8 130 76.2
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 1.3e-51 206.8 130 76.2
BraA05t22668Z Brassica rapa HOM05D003976 ORTHO05D004711 1.3e-51 206.8 139 71.9
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 1.3e-51 206.8 130 73.8
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 1.3e-51 206.8 130 73.8
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 1.7e-51 206.5 130 76.2
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 1.7e-51 206.5 139 71.9
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 1.7e-51 206.5 130 77.7
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 1.7e-51 206.5 130 76.2
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 1.7e-51 206.5 130 75.4
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 2.2e-51 206.1 132 78.0
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 2.2e-51 206.1 130 74.6
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 2.9e-51 205.7 139 70.5
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 2.9e-51 205.7 130 76.2
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 1.1e-50 203.8 139 74.1
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 1.1e-50 203.8 130 75.4
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 3.2e-50 202.2 129 75.2
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 7.0e-50 201.1 127 77.2
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 7.0e-50 201.1 137 73.0
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 1.1e-47 193.7 156 66.0
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 7.3e-47 191.0 161 64.0
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 8.6e-40 167.5 129 64.3
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 2.1e-38 162.9 136 59.6
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.4e-37 160.2 129 61.2
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.2e-36 157.1 126 61.9
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 2.9e-35 152.5 126 60.3
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 3.7e-35 152.1 129 57.4
Actinidia18608 Actinidia chinensis HOM05D003976 ORTHO05D004711 2.3e-29 132.9 80 80.0
Psat7g009440 Pisum sativum HOM05D003976 ORTHO05D004711 1.3e-27 127.1 75 80.0
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-26 124.0 79 70.9
TPR.G28835 Trifolium pratense HOM05D003976 ORTHO05D004711 5.1e-24 115.2 72 72.2
Gohir.D10G210566 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.9e-23 113.2 73 71.2
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 2.9e-19 99.4 60 81.7
PSO478G0690 Papaver somniferum HOM05D003976 ORTHO05D004711 2.4e-18 96.3 59 79.7
CDE10G0443 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.2e-17 94.0 55 81.8
Cre01.g003050 Chlamydomonas reinhardtii HOM05D003976 ORTHO05D004711 2.3e-16 89.7 127 37.0
SHI08886 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-16 87.8 59 74.6
TPR.G6473 Trifolium pratense HOM05D003976 ORTHO05D004711 6.4e-11 71.6 48 70.8


User provided reference genes

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