Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0723G046 Amborella trichopoda HOM05D000101 ORTHO05D000089 8.1e-28 126.3 63 100.0
ATR1120G092 Amborella trichopoda HOM05D000101 ORTHO05D000089 4.5e-10 67.4 52 59.6
MBI18_g38834_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.5e-10 67.4 62 51.6
ATR0723G043 Amborella trichopoda HOM05D000092 ORTHO05D000089 1.0e-09 66.2 52 65.4
ATR1098G085 Amborella trichopoda HOM05D000092 ORTHO05D000089 1.0e-09 66.2 52 59.6
MBI02_g10556_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.2e-09 65.1 62 48.4
ATR0789G033 Amborella trichopoda HOM05D000101 ORTHO05D000089 2.9e-09 64.7 51 62.7
ATR0037G006 Amborella trichopoda HOM05D000092 ORTHO05D000089 3.8e-09 64.3 52 55.8
MBI02_g10557_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.8e-09 64.3 62 50.0
ATR1120G012 Amborella trichopoda HOM05D000092 ORTHO05D000089 6.5e-09 63.5 52 55.8
MBI02_g10558_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.5e-09 63.5 62 50.0
MBI02_g26436_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.1e-08 62.8 58 50.0
MBI02_g26439_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.9e-08 62.0 62 48.4
MBI07_g09264_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.9e-08 62.0 50 56.0
MBI02_g29699_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.2e-08 61.2 48 56.2
MBI18_g26661_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.2e-08 61.2 52 53.8
MBI11_g07626_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.2e-08 60.8 44 59.1
MBI11_g41125_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.2e-08 60.8 55 50.9
MBI11_g12656_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 9.4e-08 59.7 44 59.1
ATR1120G005 Amborella trichopoda HOM05D000101 ORTHO05D000089 1.2e-07 59.3 52 53.8
MBI02_g29701_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.6e-07 58.9 42 59.5
MBI08_g28970_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.6e-07 58.9 55 45.5
Nitab4.5_0005412g0020 Nicotiana tabacum HOM05D000101 ORTHO05D000089 1.6e-07 58.9 42 59.5
MBI05_g44824_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.7e-07 58.2 50 50.0
MBI02_g29700_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.6e-07 57.8 42 59.5
MBI11_g40803_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.6e-07 57.8 51 51.0
QL08p018363 Quercus lobata HOM05D000101 ORTHO05D000089 3.6e-07 57.8 44 56.8
Dinv24581 Davidia involucrata HOM05D000101 ORTHO05D000089 4.6e-07 57.4 50 48.0
ATR0752G227 Amborella trichopoda HOM05D000101 ORTHO05D000089 6.1e-07 57.0 53 47.2
Ciclev10027511m.g Citrus clementina HOM05D000101 ORTHO05D000089 7.9e-07 56.6 40 57.5
Dinv19546 Davidia involucrata HOM05D000101 ORTHO05D000089 7.9e-07 56.6 50 48.0
QL08p018214 Quercus lobata HOM05D000101 ORTHO05D000089 7.9e-07 56.6 42 57.1
ATR0752G136 Amborella trichopoda HOM05D000101 ORTHO05D000089 1.0e-06 56.2 43 48.8
MBI02_g35906_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.0e-06 56.2 62 46.8
Lj5C275T1 Lonicera japonica HOM05D000101 ORTHO05D003282 1.4e-06 55.8 53 47.2
QL08p018201 Quercus lobata HOM05D000101 ORTHO05D000089 1.4e-06 55.8 40 60.0
ATR0680G329 Amborella trichopoda HOM05D000101 ORTHO05D000089 1.8e-06 55.5 52 48.1
CAN.G1646.8 Capsicum annuum HOM05D000101 ORTHO05D000089 1.8e-06 55.5 47 48.9
CAN.G845.13 Capsicum annuum HOM05D000101 ORTHO05D000089 1.8e-06 55.5 42 57.1
Ciclev10027517m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.8e-06 55.5 40 55.0
Dinv02505 Davidia involucrata HOM05D000101 ORTHO05D000089 1.8e-06 55.5 50 46.0
Dinv07876 Davidia involucrata HOM05D000101 ORTHO05D000089 1.8e-06 55.5 50 46.0
QL05p000674 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-06 55.5 51 51.0
QL05p000713 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-06 55.5 51 51.0
QL05p000733 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-06 55.5 51 51.0
QL05p000741 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-06 55.5 51 51.0
QL05p000767 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-06 55.5 51 51.0
ATR0322G040 Amborella trichopoda HOM05D000101 ORTHO05D000089 2.3e-06 55.1 54 42.6
Dinv00143 Davidia involucrata HOM05D000101 ORTHO05D000089 2.3e-06 55.1 50 48.0
MBI04_g40434_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000042 2.3e-06 55.1 41 58.5
MBI16_g26406_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D019210 2.3e-06 55.1 46 54.3
Manes.15G123000 Manihot esculenta HOM05D000101 ORTHO05D000089 2.3e-06 55.1 51 49.0
CAN.G845.4 Capsicum annuum HOM05D000101 ORTHO05D000089 3.0e-06 54.7 47 48.9
Ciclev10026939m.g Citrus clementina HOM05D000101 ORTHO05D000089 3.0e-06 54.7 38 55.3
MBI04_g22121_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000042 3.0e-06 54.7 41 56.1
Ciclev10024856m.g Citrus clementina HOM05D000101 ORTHO05D000089 3.9e-06 54.3 40 52.5
Dinv05920 Davidia involucrata HOM05D000101 ORTHO05D000089 3.9e-06 54.3 50 46.0
Lj5A271T96 Lonicera japonica HOM05D000101 ORTHO05D003282 3.9e-06 54.3 59 42.4
MBI11_g17525_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.9e-06 54.3 42 57.1
MBI17_g24633_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.9e-06 54.3 53 47.2
QL12p023642 Quercus lobata HOM05D000101 ORTHO05D000089 3.9e-06 54.3 50 54.0
Ciclev10024833m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 52.5
Ciclev10024834m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 52.5
Ciclev10024835m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 52.5
Ciclev10024836m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 52.5
Ciclev10024848m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 52.5
Ciclev10024971m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 52.5
Ciclev10025008m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 52.5
Ciclev10027254m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 52.5
Ciclev10027362m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 55.0
Ciclev10027513m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.1e-06 53.9 40 55.0
MBI05_g36586_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 5.1e-06 53.9 50 42.0
MBI11_g05461_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 5.1e-06 53.9 50 42.0
MBI11_g47636_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 5.1e-06 53.9 42 54.8
Peaxi162Scf00102g00936 Petunia axillaris HOM05D000101 ORTHO05D000089 5.1e-06 53.9 42 52.4
PGSC0003DMG400012466 Solanum tuberosum HOM05D000101 ORTHO05D000089 5.1e-06 53.9 45 48.9
Ciclev10027047m.g Citrus clementina HOM05D000101 ORTHO05D000089 6.7e-06 53.5 40 52.5
Ciclev10027535m.g Citrus clementina HOM05D000101 ORTHO05D000089 6.7e-06 53.5 40 50.0
Ciclev10027582m.g Citrus clementina HOM05D000101 ORTHO05D000089 6.7e-06 53.5 40 52.5
MBI11_g05444_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.7e-06 53.5 50 44.0
MBI11_g13896_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.7e-06 53.5 50 44.0
MBI12_g17628_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D003282 6.7e-06 53.5 43 51.2
MBI18_g24213_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.7e-06 53.5 42 52.4
Sopen08g003220 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.5 45 51.1
ATR0618G196 Amborella trichopoda HOM05D000092 ORTHO05D000089 8.8e-06 53.1 52 48.1
Ciclev10013966m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.8e-06 53.1 40 50.0
Ciclev10024865m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.8e-06 53.1 40 50.0
Ciclev10027261m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.8e-06 53.1 40 55.0
Ciclev10027594m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.8e-06 53.1 40 52.5
Duzib187G0797 Durio zibethinus HOM05D000101 ORTHO05D000089 8.8e-06 53.1 64 39.1
Lj5C364T5 Lonicera japonica HOM05D000101 ORTHO05D003282 8.8e-06 53.1 53 43.4
MBI11_g31295_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 8.8e-06 53.1 47 51.1
MBI11_g42046_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 8.8e-06 53.1 50 44.0
Nitab4.5_0003152g0120 Nicotiana tabacum HOM05D000101 ORTHO05D000089 8.8e-06 53.1 42 50.0
Potri.001G416900 Populus trichocarpa HOM05D000092 ORTHO05D000089 8.8e-06 53.1 42 59.5
Thecc.02G013800 Theobroma cacao HOM05D000101 ORTHO05D003282 8.8e-06 53.1 53 41.5


User provided reference genes

Program Settings