Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0723G032 Amborella trichopoda HOM05D007509 ORTHO05D009525 4.2e-26 120.6 59 100.0
Dinv35801 Davidia involucrata HOM05D007509 ORTHO05D009525 2.4e-21 104.8 56 87.5
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 3.1e-21 104.4 58 81.0
CiPaw.09G170600 Carya illinoinensis HOM05D007509 ORTHO05D009525 2.6e-20 101.3 59 78.0
TWI53G0287 Tripterygium wilfordii HOM05D007509 ORTHO05D009525 2.6e-20 101.3 57 82.5
Glyma.13G141100 Glycine max HOM05D007509 ORTHO05D009525 7.7e-20 99.8 56 82.1
Atru.chr8.1768 Acer truncatum HOM05D007509 ORTHO05D009525 1.0e-19 99.4 58 79.3
Gohir.A09G145100 Gossypium hirsutum HOM05D007509 ORTHO05D009525 1.0e-19 99.4 58 81.0
Gohir.D09G141225 Gossypium hirsutum HOM05D007509 ORTHO05D009525 1.3e-19 99.0 58 79.3
Manes.07G043500 Manihot esculenta HOM05D007509 ORTHO05D009525 1.3e-19 99.0 57 78.9
Medtr7g102320 Medicago truncatula HOM05D007509 ORTHO05D009525 1.7e-19 98.6 59 78.0
TWI74G1449 Tripterygium wilfordii HOM05D007509 ORTHO05D009525 1.7e-19 98.6 57 80.7
Cc06_g04400 Coffea canephora HOM05D007509 ORTHO05D009525 2.2e-19 98.2 56 85.7
Gohir.A04G071200 Gossypium hirsutum HOM05D007509 ORTHO05D009525 2.2e-19 98.2 58 81.0
Gorai.006G162100 Gossypium raimondii HOM05D007509 ORTHO05D009525 2.2e-19 98.2 58 79.3
Gorai.009G414000 Gossypium raimondii HOM05D007509 ORTHO05D009525 2.2e-19 98.2 58 81.0
QL07p042864 Quercus lobata HOM05D007509 ORTHO05D009525 2.2e-19 98.2 58 77.6
Gohir.D04G109900 Gossypium hirsutum HOM05D007509 ORTHO05D009525 2.9e-19 97.8 58 79.3
Nn6g35255 Nelumbo nucifera HOM05D007509 ORTHO05D009525 2.9e-19 97.8 57 82.5
Thecc.05G069500 Theobroma cacao HOM05D007509 ORTHO05D009525 2.9e-19 97.8 58 77.6
Potri.006G122600 Populus trichocarpa HOM05D007509 ORTHO05D009525 3.8e-19 97.4 52 86.5
Prupe.7G127400 Prunus persica HOM05D007509 ORTHO05D009525 3.8e-19 97.4 59 79.7
arahy.Tifrunner.gnm1.ann1.KQD9UV Arachis hypogaea HOM05D007509 ORTHO05D009525 5.0e-19 97.1 57 82.5
CANSAT80G0537 Cannabis sativa HOM05D007509 ORTHO05D009525 5.0e-19 97.1 59 76.3
FAN09G1001 Fragaria x ananassa HOM05D007509 ORTHO05D009525 5.0e-19 97.1 57 77.2
Glyma.10G054000 Glycine max HOM05D007509 ORTHO05D009525 5.0e-19 97.1 56 80.4
RcHm_v2.0_Chr3g0470531 Rosa chinensis HOM05D007509 ORTHO05D009525 5.0e-19 97.1 59 76.3
arahy.Tifrunner.gnm1.ann1.M25UX0 Arachis hypogaea HOM05D007509 ORTHO05D009525 6.5e-19 96.7 57 80.7
arahy.Tifrunner.gnm1.ann1.Z0MF7F Arachis hypogaea HOM05D007509 ORTHO05D009525 6.5e-19 96.7 57 80.7
TAR369G0282 Trochodendron aralioides HOM05D007509 ORTHO05D009525 6.5e-19 96.7 52 82.7
Cpa.g.sc92.105 Carica papaya HOM05D007509 ORTHO05D009525 1.1e-18 95.9 57 78.9
Duzib093G1616 Durio zibethinus HOM05D007509 ORTHO05D009525 1.4e-18 95.5 52 86.5
HanXRQChr14g0432941 Helianthus annuus HOM05D007509 ORTHO05D009525 1.4e-18 95.5 54 81.5
Phvul.007G148600 Phaseolus vulgaris HOM05D007509 ORTHO05D009525 1.4e-18 95.5 54 81.5
TPR.G32808 Trifolium pratense HOM05D001446 ORTHO05D001360 1.4e-18 95.5 59 74.6
Ciclev10013275m.g Citrus clementina HOM05D007509 ORTHO05D009525 2.5e-18 94.7 57 78.9
FAN05G4600 Fragaria x ananassa HOM05D007509 ORTHO05D009525 2.5e-18 94.7 57 73.7
FAN05G4982 Fragaria x ananassa HOM05D007509 ORTHO05D009525 2.5e-18 94.7 57 73.7
Psat6g074800 Pisum sativum HOM05D007509 ORTHO05D009525 2.5e-18 94.7 52 86.5
Sed0001231 Sechium edule HOM05D007509 ORTHO05D009525 2.5e-18 94.7 57 71.9
Nn2g13827 Nelumbo nucifera HOM05D007509 ORTHO05D009525 3.2e-18 94.4 58 77.6
Psat3g041640 Pisum sativum HOM05D007509 ORTHO05D009525 3.2e-18 94.4 59 72.9
Actinidia32487 Actinidia chinensis HOM05D007509 ORTHO05D009525 5.5e-18 93.6 56 78.6
CDE02G4326 Ceratophyllum demersum HOM05D007509 ORTHO05D009525 5.5e-18 93.6 58 81.0
MD12G1108800 Malus domestica HOM05D007509 ORTHO05D009525 5.5e-18 93.6 57 80.7
Actinidia31324 Actinidia chinensis HOM05D007509 ORTHO05D009525 7.2e-18 93.2 56 76.8
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 7.2e-18 93.2 57 75.4
FAN02G1612 Fragaria x ananassa HOM05D007509 ORTHO05D009525 9.4e-18 92.8 57 73.7
Lalb_Chr02g0155761 Lupinus albus HOM05D007509 ORTHO05D009525 9.4e-18 92.8 56 82.1
MELO3C009368.2 Cucumis melo HOM05D007509 ORTHO05D009525 1.2e-17 92.4 57 71.9
CsaV3_3G036080 Cucumis sativus L. HOM05D007509 ORTHO05D009525 1.2e-17 92.4 57 71.9
TAR633G0343 Trochodendron aralioides HOM05D007509 ORTHO05D009525 1.2e-17 92.4 59 72.9
FvH4_6g16590 Fragaria vesca HOM05D007509 ORTHO05D009525 1.6e-17 92.0 57 73.7
FAN14G0331 Fragaria x ananassa HOM05D007509 ORTHO05D009525 1.6e-17 92.0 57 73.7
Os02g0823600 Oryza sativa ssp. japonica HOM05D007509 ORTHO05D009525 2.1e-17 91.7 58 72.4
Rhsim03G0090000 Rhododendron simsii HOM05D007509 ORTHO05D009525 2.1e-17 91.7 56 75.0
Lj5g0013352 Lotus japonicus HOM05D007509 ORTHO05D009525 2.7e-17 91.3 52 80.8
EL10Ac4g08317 Beta vulgaris HOM05D007509 ORTHO05D009525 3.6e-17 90.9 52 76.9
CDE08G0025 Ceratophyllum demersum HOM05D007509 ORTHO05D009525 4.6e-17 90.5 57 80.7
GSVIVG01033662001 Vitis vinifera HOM05D007509 ORTHO05D009525 6.1e-17 90.1 59 72.9
Aqoxy2G01711 Aquilegia oxysepala HOM05D007509 ORTHO05D009525 7.9e-17 89.7 52 75.0
TPR.G31192 Trifolium pratense HOM05D007509 ORTHO05D009525 7.9e-17 89.7 55 74.5
PGR004G0585 Punica granatum HOM05D007509 ORTHO05D009525 1.0e-16 89.4 57 70.2
Migut.L01714 Erythranthe guttata HOM05D007509 ORTHO05D009525 1.4e-16 89.0 56 76.8
vmacro07305 Vaccinium macrocarpon HOM05D007509 ORTHO05D009525 1.8e-16 88.6 51 80.4
Zm00001eb190910 Zea mays HOM05D007509 ORTHO05D009525 1.8e-16 88.6 59 67.8
AUR62019539 Chenopodium quinoa HOM05D007509 ORTHO05D009525 2.3e-16 88.2 52 73.1
AUR62036098 Chenopodium quinoa HOM05D007509 ORTHO05D009525 2.3e-16 88.2 52 73.1
Aa31LG1G21690 Aethionema arabicum HOM05D007509 ORTHO05D009525 5.1e-16 87.0 57 66.7
ECA246G0714 Erigeron canadensis HOM05D007509 ORTHO05D009525 5.1e-16 87.0 52 76.9
Medtr1g063000 Medicago truncatula HOM05D007509 ORTHO05D009525 5.1e-16 87.0 55 74.5
PSO339G5046 Papaver somniferum HOM05D007509 ORTHO05D009525 1.1e-15 85.9 58 67.2
THA.LOC104816357 Tarenaya hassleriana HOM05D007509 ORTHO05D009525 1.1e-15 85.9 55 70.9
PGSC0003DMG400003867 Solanum tuberosum HOM05D007509 ORTHO05D009525 2.2e-14 81.6 56 64.3
Thhalv10015146m.g Eutrema salsugineum HOM05D007509 ORTHO05D009525 2.8e-14 81.3 58 65.5
Nitab4.5_0004476g0020 Nicotiana tabacum HOM05D007509 ORTHO05D009525 2.8e-14 81.3 56 66.1
Sp6g39270 Schrenkiella parvula HOM05D007509 ORTHO05D009525 4.8e-14 80.5 58 62.1
Sopen09g003160 Solanum pennellii HOM05D007509 ORTHO05D009525 4.8e-14 80.5 56 64.3
Peaxi162Scf00722g00034 Petunia axillaris HOM05D007509 ORTHO05D009525 6.3e-14 80.1 56 69.6
Solyc09g008335.1 Solanum lycopersicum HOM05D007509 ORTHO05D009525 1.1e-13 79.3 56 64.3
AL6G12840 Arabidopsis lyrata HOM05D007509 ORTHO05D009525 1.8e-13 78.6 57 59.6
Carub.0006s0228 Capsella rubella HOM05D007509 ORTHO05D009525 3.1e-13 77.8 58 58.6
CARHR209880 Cardamine hirsuta HOM05D007509 ORTHO05D009525 3.1e-13 77.8 58 56.9
AT5G03460 Arabidopsis thaliana HOM05D007509 ORTHO05D009525 1.2e-12 75.9 58 55.2
BcaC06g32063 Brassica carinata HOM05D007509 ORTHO05D009525 1.5e-12 75.5 51 62.7
BolC9t60072H Brassica oleracea HOM05D007509 ORTHO05D009525 1.5e-12 75.5 51 62.7
C02p01090 Brassica napus HOM05D007509 ORTHO05D009525 2.0e-12 75.1 51 62.7
BolC2t06099H Brassica oleracea HOM05D007509 ORTHO05D009525 2.0e-12 75.1 51 62.7
BraA02t04762Z Brassica rapa HOM05D007509 ORTHO05D009525 2.0e-12 75.1 51 62.7
A10p32560 Brassica napus HOM05D007509 ORTHO05D009525 2.6e-12 74.7 47 66.0
BraA10t45291Z Brassica rapa HOM05D007509 ORTHO05D009525 2.6e-12 74.7 47 66.0
C09p73360 Brassica napus HOM05D007509 ORTHO05D009525 3.4e-12 74.3 51 60.8
Aa31LG3G2340 Aethionema arabicum HOM05D007509 ORTHO05D009525 1.6e-09 65.5 46 60.9
Sed0008520 Sechium edule HOM05D007509 ORTHO05D009525 1.4e-08 62.4 39 61.5
unitig_0.g681 Utricularia gibba HOM05D007509 ORTHO05D009525 2.3e-08 61.6 46 65.2
TAR627G1182 Trochodendron aralioides HOM05D007509 ORTHO05D008594 4.4e-07 57.4 30 73.3
SMO147G0160 Selaginella moellendorffii HOM05D007509 ORTHO05D009525 5.7e-07 57.0 48 54.2
CiPaw.03G172600 Carya illinoinensis HOM05D007509 ORTHO05D009525 2.8e-06 54.7 59 55.9
Oeu056534.1 Olea europaea HOM05D007509 ORTHO05D009525 4.8e-06 53.9 30 66.7
BcaB07g30588 Brassica carinata HOM05D007509 ORTHO05D009525 6.3e-06 53.5 38 57.9
DCAR_020813 Daucus carota HOM05D007509 ORTHO05D009525 6.3e-06 53.5 28 71.4
BcaB05g21842 Brassica carinata HOM05D007509 ORTHO05D009525 8.2e-06 53.1 30 66.7
HPP92_026749 Vanilla planifolia HOM05D007509 ORTHO05D009525 8.2e-06 53.1 37 59.5


User provided reference genes

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